| Gene | Input weight | Standard | Rank | |
| FGFR2 | - | -1 | 237 | |
| PDGFRA | - | -1 | 320 | |
| MYH10 | - | - | 366 | |
| APBA2 | 0.25 | 1 | 400 | |
| CHD7 | - | -1 | 416 | |
| ACVR1B | - | - | 510 | |
| SRSF1 | - | - | 516 | |
| SP3 | - | - | 562 | |
| ARNT2 | 0.25 | 1 | 601 | |
| PTPRR | - | - | 635 | |
| NCOA6 | - | - | 700 | |
| SMARCA4 | - | - | 801 | |
| SMAD4 | - | - | 821 | |
| SMAD3 | - | - | 823 | |
| ZMIZ1 | - | - | 861 | |
| ZFPM2 | - | -1 | 867 | |
| MAP2K1 | 0.25 | 1 | 907 | |
| MBNL1 | - | - | 956 | |
| AKT1 | 0.25 | 1 | 1020 | |
| MED1 | - | - | 1034 | |
| NDEL1 | 0.25 | 1 | 1074 | |
| HIF1A | - | - | 1075 | |
| CUL3 | 1.0 | 1 | 1093 | |
| MAPK1 | - | - | 1128 | |
| BMPR1A | - | - | 1140 | |
| MIB1 | 0.25 | 1 | 1153 | |
| GAB1 | - | - | 1198 | |
| PCGF2 | - | - | 1217 | |
| AMOT | - | - | 1325 | |
| RUNX1 | - | -1 | 1449 | |
| LEF1 | - | - | 1499 | |
| SOX10 | - | -1 | 1520 | |
| JUNB | - | - | 1547 | |
| COL4A3BP | - | - | 1742 | |
| COPS3 | - | - | 1764 | |
| PITPNB | - | - | 1770 | |
| AR | 0.25 | 1 | 1902 | |
| SOX6 | - | - | 1923 | |
| FGFR1 | - | - | 2262 | |
| MAPK8IP3 | - | - | 2274 | |
| WNT2 | 0.25 | 1 | 2299 | |
| EPB41L5 | - | - | 2335 | |
| SIN3A | - | - | 2391 | |
| TJP1 | - | - | 2480 | |
| ATP7A | - | -1 | 2483 | |
| EGFR | - | -1 | 2546 | |
| FOXA2 | - | - | 2645 | |
| CITED2 | - | - | 2650 | |
| TTPA | - | - | 2681 | |
| SMAD2 | - | - | 2694 | |
| TULP3 | - | - | 2770 | |
| SRF | - | - | 2841 | |
| NOTCH1 | - | -1 | 2865 | |
| ADD1 | - | -1 | 2876 | |
| SKIL | - | - | 2889 | |
| GRB2 | - | - | 2962 | |
| C2CD3 | - | - | 2994 | |
| UBE2A | 0.25 | 1 | 3019 | |
| FOXD3 | - | - | 3025 | |
| CITED1 | - | - | 3064 | |
| MSX1 | - | -1 | 3127 | |
| ZFAND5 | - | - | 3128 | |
| NODAL | - | -1 | 3149 | |
| GATA2 | - | -1 | 3291 | |
| BMI1 | - | - | 3300 | |
| RSPO3 | - | - | 3347 | |
| BCL2L11 | - | - | 3469 | |
| FOXF1 | - | -1 | 3518 | |
| MED21 | - | - | 3533 | |
| HAND1 | - | - | 3590 | |
| CEBPB | - | - | 3598 | |
| TSHZ3 | - | - | 3848 | |
| EDNRA | - | -1 | 3857 | |
| ITGB1 | - | - | 3903 | |
| PRMT1 | - | - | 4008 | |
| UBE2B | - | - | 4057 | |
| CDX2 | - | - | 4071 | |
| VEGFA | 0.25 | 1 | 4087 | |
| HSF1 | - | - | 4101 | |
| MAFG | - | - | 4115 | |
| CUBN | - | - | 4185 | |
| SP1 | - | - | 4195 | |
| HS6ST1 | - | - | 4217 | |
| TET1 | - | - | 4338 | |
| PRDM1 | - | - | 4368 | |
| ESRRB | 0.25 | 1 | 4453 | |
| HOPX | - | - | 4550 | |
| LMX1B | 0.5 | 1 | 4551 | |
| SOX8 | - | - | 4609 | |
| PLCG1 | - | - | 4744 | |
| WNT3A | - | - | 4747 | |
| MECOM | - | - | 4979 | |
| NOG | - | -1 | 5439 | |
| HAND2 | - | - | 5589 | |
| CDX4 | - | - | 5849 | |
| HES1 | 0.25 | 1 | 5912 | |
| ACVR1 | - | -1 | 6054 | |
| KEAP1 | - | - | 6103 | |
| GLI3 | - | -1 | 6261 | |
| MSH2 | - | -1 | 6311 | |
| ALS2 | - | -1 | 6326 | |
| XAB2 | - | - | 6412 | |
| BCL2L1 | - | - | 6563 | |
| FUT8 | - | - | 6626 | |
| TGFBR3 | - | - | 6672 | |
| KMT2D | - | - | 6700 | |
| TWIST1 | - | -1 | 6980 | |
| WNT7B | - | - | 7113 | |
| IHH | - | -1 | 7160 | |
| LIG4 | - | -1 | 7187 | |
| TAB1 | - | - | 7218 | |
| SLC30A1 | - | - | 7241 | |
| TGFBR1 | - | -1 | 7268 | |
| SLC34A2 | - | -1 | 7410 | |
| TAPT1 | - | - | 7465 | |
| HES3 | - | - | 7466 | |
| UBR3 | - | - | 8003 | |
| DNMT3L | - | - | 8034 | |
| WNT9B | - | - | 8217 | |
| NMT1 | - | - | 8219 | |
| GCM1 | - | - | 8388 | |
| MYH9 | - | -1 | 8434 | |
| DUSP3 | - | - | 8506 | |
| NASP | - | - | 8601 | |
| C6 | - | - | 8602 | |
| NLRP5 | - | - | 8904 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| HORMAD1 | - | - | 9077 | |
| CEBPA | - | -1 | 9079 | |
| SNAI1 | - | - | 9198 | |
| RDH10 | - | - | 9300 | |
| TIE1 | - | - | 9413 | |
| ESX1 | - | - | 9451 | |
| TERF2 | - | - | 9505 | |
| EDN1 | - | - | 9540 | |
| HNF1B | - | -1 | 9881 | |
| SALL4 | - | - | 9929 | |
| ASCL2 | - | - | 10237 | |
| EIF2S2 | - | - | 10269 | |
| TGFBR2 | - | -1 | 10407 | |
| XRCC2 | - | - | 10672 | |
| GDF3 | - | -1 | 10819 | |
| GATA6 | - | -1 | 10828 | |
| EPAS1 | - | - | 10869 | |
| PYGO2 | - | - | 11014 | |
| DAD1 | - | - | 11136 | |
| TFEB | - | - | 11138 | |
| MFN2 | - | -1 | 11607 | |
| ACVRL1 | - | -1 | 11656 | |
| LY6E | - | - | 12003 | |
| KDM1A | - | - | 12183 | |
| APBA3 | - | - | 12305 | |
| GATA4 | - | -1 | 12466 | |
| IFT88 | - | - | 12504 | |
| POLE | - | - | 12655 | |
| ETNK2 | - | - | 12786 | |
| SMARCB1 | - | -1 | 12857 | |
| EOMES | - | - | 12952 | |
| TGFB3 | - | -1 | 13097 | |
| CDK11A | - | - | 13193 | |
| FBXW8 | - | - | 13419 | |
| OOEP | - | - | 13495 | |
| MDFI | - | - | 13519 | |
| PLCD3 | - | - | 13791 | |
| FOXC1 | - | -1 | 13793 | |
| MYH6 | - | -1 | 13823 | |
| GJA1 | 0.25 | 1 | 13867 | |
| GNA12 | - | - | 14481 | |
| ELL | - | - | 14839 | |
| TAF8 | - | - | 14890 | |
| ZNF830 | - | - | 15040 | |
| MBD3 | 0.25 | 1 | 15779 | |
| NBN | - | -1 | 16066 | |
| ZP3 | - | - | 17443 | |
| INSL3 | - | -1 | 19059 | |
| CCNB1IP1 | - | - | 19175 | |
| HINFP | - | - | 19490 | |
| POU5F1 | - | - | 19704 | |
| RIC8A | - | - | 20379 | |
| G2E3 | - | - | 20704 | |
| KLF2 | - | - | 20711 | |
| SOX18 | - | - | 20812 | |
| ADAM10 | - | - | 20986 | |
| PDGFB | - | - | 21071 | |
| ADM | - | - | 21106 | |
| SYVN1 | - | - | 21151 | |
| KAT2A | - | - | 21262 | |
| RPGRIP1L | - | - | 21472 | |
| SBDS | - | - | 21769 | |
| ERCC2 | - | -1 | 21804 | |
| CDK11B | - | - | 21881 | |
| C5 | - | -1 | 22004 | |
| BTF3 | - | - | 22049 | |
| LIF | - | - | 22134 | |
| GJB5 | - | - | 22420 | |
| PLCD1 | - | - | 22496 | |
| CYR61 | - | - | 22574 | |
| SOCS3 | - | - | 22661 | |
| CCM2 | - | - | 22768 | |
| PRPF19 | - | - | 22991 | |
| RCN1 | - | - | 23013 | |
| YBX1 | - | - | 23203 | |
| GJB3 | - | -1 | 23224 | |
| YBX3 | - | - | 23237 | |
| FZD5 | - | - | 23249 | |
| ALKBH1 | - | - | 23309 | |
| NSDHL | - | - | 23481 | |
| RBBP8 | - | - | 23530 | |
| CAPN2 | - | - | 23541 | |
| NCAPG2 | - | - | 23868 | |
| SPINT1 | - | - | 23992 | |
| FLVCR1 | - | - | 24042 | |
| INPP5K | - | - | 24055 | |
| ENDOG | - | - | 24105 | |
| ELF3 | - | - | 24187 | |
| KRT19 | - | - | 24520 | |
| ADA | 0.5 | 1 | 24751 | |
| PLOD3 | - | - | 24938 | |
| ICMT | - | - | 24975 | |
| RARRES2 | - | - | 25092 | |
| CCNB1 | - | - | 25174 | |
| XRCC4 | - | - | 25256 | |
| DAB2 | - | - | 25338 | |
| NLE1 | - | - | 25368 | |
| PLK4 | - | - | 25369 | |
| CCNB2 | - | - | 25384 | |
| GINS1 | - | - | 25480 | |
| TEAD4 | - | - | 25568 |
GO:0001701
| Name | Description | External IDs |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide | Entrez:5156  Ensembl: ENSG00000134853  HPRD: 01429  HGNC: 8803  |
| MYH10 | myosin, heavy chain 10, non-muscle | Entrez:4628  HGNC: 7568  Ensembl: ENSG00000133026  HPRD: 01178  |
| APBA2 | amyloid beta (A4) precursor protein-binding, family A, member 2 | Entrez:321  HPRD: 04090  Ensembl: ENSG00000034053  HGNC: 579  |
| CHD7 | chromodomain helicase DNA binding protein 7 | Entrez:55636  Ensembl: ENSG00000171316  HGNC: 20626  HPRD: 10595  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide | ||||
| MYH10 | myosin, heavy chain 10, non-muscle | ||||
| APBA2 | amyloid beta (A4) precursor protein-binding, family A, member 2 | ||||
| CHD7 | chromodomain helicase DNA binding protein 7 |
| Query gene | Gene | Gene description | Edge score |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| PDGFRA | PDGFRA | platelet-derived growth factor receptor, alpha polypeptide | |
| MYH10 | MYH10 | myosin, heavy chain 10, non-muscle | |
| APBA2 | APBA2 | amyloid beta (A4) precursor protein-binding, family A, member 2 | |
| CHD7 | CHD7 | chromodomain helicase DNA binding protein 7 |