| Gene | Input weight | Standard | Rank | |
| ATP2B2 | 0.5 | 1 | 3 | |
| ERBB4 | 0.25 | 1 | 86 | |
| CREB1 | - | - | 100 | |
| NCOA3 | - | - | 192 | |
| SOX2 | - | -1 | 200 | |
| FGFR2 | - | -1 | 237 | |
| IGF1R | - | - | 252 | |
| LRP6 | - | - | 279 | |
| PDGFRA | - | -1 | 320 | |
| UBE3A | 0.25 | 1 | 365 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| ASCL1 | - | - | 413 | |
| PBX1 | - | - | 489 | |
| NR3C1 | - | - | 496 | |
| SALL1 | - | - | 506 | |
| PAX6 | 0.25 | 1 | 544 | |
| CRH | - | - | 563 | |
| POU3F2 | - | - | 750 | |
| SMAD3 | - | - | 823 | |
| TGFB2 | - | - | 834 | |
| PCSK1 | - | - | 898 | |
| EDA | - | -1 | 925 | |
| NRG1 | 0.25 | 1 | 936 | |
| SOX9 | - | -1 | 970 | |
| PTCH1 | - | -1 | 972 | |
| MED1 | - | - | 1034 | |
| MAPK1 | - | - | 1128 | |
| BMP7 | - | - | 1137 | |
| BMPR1A | - | - | 1140 | |
| HOXD3 | - | - | 1195 | |
| NEURL | - | - | 1298 | |
| IRS2 | - | -1 | 1300 | |
| ERBB3 | - | - | 1350 | |
| IRS1 | - | -1 | 1374 | |
| PTEN | 1.0 | 1 | 1389 | |
| PRLR | 0.25 | 1 | 1393 | |
| LEF1 | - | - | 1499 | |
| ESR1 | 0.25 | 1 | 1791 | |
| CDO1 | - | - | 1847 | |
| BTRC | - | - | 1884 | |
| AR | 0.25 | 1 | 1902 | |
| ISL1 | - | - | 1974 | |
| FOXA1 | - | - | 1990 | |
| PTHLH | - | -1 | 1993 | |
| ID2 | - | - | 2154 | |
| CGA | 0.25 | 1 | 2258 | |
| FGFR1 | - | - | 2262 | |
| NR0B1 | - | -1 | 2278 | |
| WNT2 | 0.25 | 1 | 2299 | |
| SOX3 | - | - | 2303 | |
| EGFR | - | -1 | 2546 | |
| FGF7 | - | - | 2591 | |
| STAT5B | - | - | 2593 | |
| CITED2 | - | - | 2650 | |
| IGF1 | 0.25 | 1 | 2793 | |
| NRP1 | - | - | 2807 | |
| SRC | - | - | 2825 | |
| NOTCH1 | - | -1 | 2865 | |
| PGR | - | - | 2926 | |
| ATP7B | - | -1 | 2928 | |
| CTNND1 | - | - | 2948 | |
| TBX3 | - | - | 2958 | |
| PLAG1 | - | -1 | 2975 | |
| PRL | 0.25 | 1 | 2977 | |
| CRKL | - | - | 3156 | |
| GSX1 | - | - | 3159 | |
| GATA2 | - | -1 | 3291 | |
| IGFBP5 | - | - | 3306 | |
| WNT5A | - | - | 3319 | |
| HOXA3 | - | - | 3427 | |
| BCL2L11 | - | - | 3469 | |
| SEMA3A | - | - | 3494 | |
| FOXF1 | - | -1 | 3518 | |
| DAG1 | - | - | 3580 | |
| CEBPB | - | - | 3598 | |
| SLC30A4 | 0.25 | 1 | 3610 | |
| DDR1 | - | - | 3647 | |
| FOXE3 | - | -1 | 3688 | |
| SERPINE2 | - | - | 3708 | |
| DRD2 | 0.25 | 1 | 3749 | |
| RXFP1 | - | - | 3767 | |
| ALDH1A2 | - | - | 3771 | |
| HOXB3 | - | - | 3793 | |
| CYP19A1 | 0.25 | 1 | 3823 | |
| USF2 | - | - | 3869 | |
| FOXE1 | - | -1 | 3900 | |
| CYP17A1 | 0.25 | 1 | 3984 | |
| TSPO | 0.25 | 1 | 4009 | |
| HOXA13 | - | - | 4036 | |
| VEGFA | 0.25 | 1 | 4087 | |
| ELF5 | - | - | 4134 | |
| NKX2-1 | - | - | 4142 | |
| GHRHR | - | - | 4237 | |
| WT1 | - | -1 | 4514 | |
| FGF10 | - | -1 | 4532 | |
| WNT3 | - | - | 4613 | |
| WNT3A | - | - | 4747 | |
| NKX3-1 | - | - | 4793 | |
| SRD5A1 | 0.25 | 1 | 4966 | |
| HOXD13 | 0.25 | 1 | 4997 | |
| GCM2 | - | - | 5007 | |
| ZNF703 | - | - | 5031 | |
| APRT | - | - | 5056 | |
| HOXA5 | - | - | 5132 | |
| TNFSF11 | - | -1 | 5271 | |
| TNFRSF11A | - | -1 | 5293 | |
| FOXB1 | - | - | 5360 | |
| DKK3 | - | - | 5413 | |
| NOG | - | -1 | 5439 | |
| OTP | - | - | 5490 | |
| TCF21 | - | - | 5633 | |
| TBX1 | 0.25 | 1 | 5772 | |
| CST3 | - | -1 | 5894 | |
| HES1 | 0.25 | 1 | 5912 | |
| ETS1 | - | - | 5943 | |
| NTN1 | - | - | 6023 | |
| TDGF1 | - | - | 6132 | |
| GLI3 | - | -1 | 6261 | |
| GC | - | - | 6284 | |
| OXTR | 0.5 | 1 | 6388 | |
| TPH1 | 0.25 | 1 | 6460 | |
| BMP4 | - | -1 | 6499 | |
| CSF1 | - | - | 6542 | |
| PAX8 | - | -1 | 6637 | |
| GDF7 | - | - | 6682 | |
| NKX2-3 | - | - | 6924 | |
| APLN | - | - | 7041 | |
| WNT7B | - | - | 7113 | |
| LAMA5 | - | - | 7171 | |
| FRS2 | - | - | 7173 | |
| TGFBR1 | - | -1 | 7268 | |
| GLI2 | - | -1 | 7307 | |
| SFRP4 | - | - | 7310 | |
| NR5A1 | - | -1 | 7328 | |
| GHRH | - | - | 7478 | |
| SLC6A3 | 0.5 | 1 | 7659 | |
| WNT11 | - | - | 7820 | |
| MET | 1.0 | 1 | 8002 | |
| FRZB | - | - | 8105 | |
| HOXB13 | - | - | 8311 | |
| TBX2 | - | - | 8392 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| RARG | 0.25 | 1 | 8575 | |
| SEMA3C | - | - | 8577 | |
| WNT10A | - | - | 8604 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| LRP5 | - | -1 | 9420 | |
| CCL11 | - | - | 9615 | |
| TGFBR2 | - | -1 | 10407 | |
| SMO | 0.25 | 1 | 10504 | |
| EDAR | - | -1 | 10537 | |
| STRA6 | - | -1 | 10685 | |
| DUOX2 | - | -1 | 11733 | |
| PSAP | - | - | 11767 | |
| LY6E | - | - | 12003 | |
| KDM1A | - | - | 12183 | |
| RXRA | 0.25 | 1 | 12299 | |
| SIX1 | - | -1 | 12393 | |
| PMCH | - | - | 12542 | |
| IL6 | - | -1 | 12695 | |
| TGFB3 | - | -1 | 13097 | |
| FGF2 | - | - | 13150 | |
| TFCP2L1 | - | - | 13244 | |
| PLXND1 | - | - | 13635 | |
| FOXC1 | - | -1 | 13793 | |
| BSX | - | - | 15113 | |
| TNF | 0.25 | 1 | 15243 | |
| TBX19 | - | - | 17620 | |
| COX2 | - | - | 17929 | |
| TG | - | - | 18556 | |
| SHH | - | -1 | 18571 | |
| NOTCH4 | - | - | 19230 | |
| ARG1 | - | -1 | 19499 | |
| JAK2 | - | -1 | 19561 | |
| AHR | - | - | 20015 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| AGPAT6 | - | - | 20163 | |
| CD44 | - | - | 20701 | |
| PLAUR | - | - | 20792 | |
| PDGFB | - | - | 21071 | |
| STAT5A | - | - | 21176 | |
| XBP1 | - | - | 21326 | |
| PITX1 | 0.25 | 1 | 21646 | |
| ALDH1A3 | - | - | 21739 | |
| WNT4 | - | - | 21809 | |
| VDR | - | - | 21837 | |
| SERPINB5 | - | - | 22491 | |
| TP63 | - | -1 | 22528 | |
| TNC | - | - | 22676 | |
| B4GALT1 | - | -1 | 22700 | |
| MDK | - | - | 22733 | |
| IRF6 | - | -1 | 22999 | |
| SLC29A2 | - | - | 23071 | |
| ERBB2 | - | -1 | 23130 | |
| TGM2 | - | - | 23204 | |
| HK2 | - | - | 23543 | |
| CDH1 | - | -1 | 23589 | |
| SCRIB | - | - | 23676 | |
| FDX1 | - | - | 23764 | |
| MGMT | - | - | 24063 | |
| SLC29A1 | - | - | 24079 | |
| ELF3 | - | - | 24187 | |
| ALOX15B | - | - | 24590 | |
| BRCA2 | - | -1 | 24637 | |
| TWSG1 | - | - | 24840 | |
| FSTL3 | - | - | 25154 | |
| PML | - | - | 25277 | |
| BCAT2 | - | - | 25326 | |
| CAV1 | - | -1 | 25381 | |
| PPAT | - | - | 25601 |
GO:0048732
| Name | Description | External IDs |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | Entrez:491  HGNC: 815  Ensembl: ENSG00000157087  HPRD: 00160  |
| ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | Entrez:2066  HGNC: 3432  HPRD: 02767  Ensembl: ENSG00000178568  |
| CREB1 | cAMP responsive element binding protein 1 | Entrez:1385  HGNC: 2345  HPRD: 00442  Ensembl: ENSG00000118260  |
| NCOA3 | nuclear receptor coactivator 3 | Entrez:8202  HGNC: 7670  Ensembl: ENSG00000124151  HPRD: 03570  |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657  HGNC: 11195  HPRD: 08921  Ensembl: ENSG00000181449  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | ||||
| ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | ||||
| CREB1 | cAMP responsive element binding protein 1 | ||||
| NCOA3 | nuclear receptor coactivator 3 | ||||
| SOX2 | SRY (sex determining region Y)-box 2 |
| Query gene | Gene | Gene description | Edge score |
| ATP2B2 | ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | |
| ERBB4 | ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | |
| CREB1 | CREB1 | cAMP responsive element binding protein 1 | |
| NCOA3 | NCOA3 | nuclear receptor coactivator 3 | |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 |