| Gene | Input weight | Standard | Rank | |
| NIPBL | - | -1 | 7 | |
| SOX11 | - | - | 96 | |
| FGFR2 | - | -1 | 237 | |
| SMAD3 | - | - | 823 | |
| SOX10 | - | -1 | 1520 | |
| ACVR2B | - | -1 | 1676 | |
| ID2 | - | - | 2154 | |
| EPB41L5 | - | - | 2335 | |
| EGFR | - | -1 | 2546 | |
| FGFR3 | - | -1 | 2640 | |
| SMAD2 | - | - | 2694 | |
| SHOX2 | - | - | 2767 | |
| NOTCH1 | - | -1 | 2865 | |
| NODAL | - | -1 | 3149 | |
| WNT5A | - | - | 3319 | |
| FOXF1 | - | -1 | 3518 | |
| SOX17 | - | - | 4024 | |
| HOXA13 | - | - | 4036 | |
| FGF10 | - | -1 | 4532 | |
| HOXD13 | 0.25 | 1 | 4997 | |
| TCF21 | - | - | 5633 | |
| GLI3 | - | -1 | 6261 | |
| BMP4 | - | -1 | 6499 | |
| NKX2-3 | - | - | 6924 | |
| IHH | - | -1 | 7160 | |
| TINAG | - | - | 7232 | |
| GLI2 | - | -1 | 7307 | |
| WNT11 | - | - | 7820 | |
| TCF7 | - | - | 8813 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| FOXP4 | - | - | 9688 | |
| HNF1B | - | -1 | 9881 | |
| SMO | 0.25 | 1 | 10504 | |
| STRA6 | - | -1 | 10685 | |
| GATA4 | - | -1 | 12466 | |
| SHH | - | -1 | 18571 | |
| TP73 | - | - | 18810 | |
| STX2 | - | - | 19379 | |
| BBS7 | - | -1 | 22032 | |
| TP63 | - | -1 | 22528 | |
| IL18 | - | - | 24018 |
GO:0048546
| Name | Description | External IDs |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836  HPRD: 10560  HGNC: 28862  Ensembl: ENSG00000164190  |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| SMAD3 | SMAD family member 3 | Entrez:4088  HPRD: 04380  HGNC: 6769  Ensembl: ENSG00000166949  |
| SOX10 | SRY (sex determining region Y)-box 10 | Entrez:6663  Ensembl: ENSG00000100146  HGNC: 11190  HPRD: 03752  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| SMAD3 | SMAD family member 3 | ||||
| SOX10 | SRY (sex determining region Y)-box 10 |
| Query gene | Gene | Gene description | Edge score |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| SMAD3 | SMAD3 | SMAD family member 3 | |
| SOX10 | SOX10 | SRY (sex determining region Y)-box 10 |