| Gene | Input weight | Standard | Rank | |
| SATB2 | 0.25 | 1 | 149 | |
| SOX2 | - | -1 | 200 | |
| FGFR2 | - | -1 | 237 | |
| FGF9 | - | - | 262 | |
| GABBR1 | 0.25 | 1 | 264 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| MEF2C | 0.25 | 1 | 428 | |
| RUNX2 | - | -1 | 480 | |
| JUND | - | - | 509 | |
| SP3 | - | - | 562 | |
| NAB1 | - | - | 656 | |
| HDAC4 | - | - | 696 | |
| SMAD3 | - | - | 823 | |
| CDH11 | - | - | 868 | |
| BMP7 | - | - | 1137 | |
| MAPK8 | - | - | 1214 | |
| NAB2 | - | - | 1372 | |
| LEF1 | - | - | 1499 | |
| JUNB | - | - | 1547 | |
| MN1 | - | -1 | 1750 | |
| ESR1 | 0.25 | 1 | 1791 | |
| GNAS | - | -1 | 1842 | |
| SMAD1 | - | - | 1872 | |
| STC1 | - | - | 1900 | |
| PTHLH | - | -1 | 1993 | |
| ACHE | - | - | 2025 | |
| MSX2 | - | -1 | 2260 | |
| CHRDL1 | - | - | 2383 | |
| EGFR | - | -1 | 2546 | |
| DLX5 | - | - | 2706 | |
| COL11A1 | 0.25 | 1 | 2725 | |
| SHOX2 | - | - | 2767 | |
| IGF1 | 0.25 | 1 | 2793 | |
| MEF2A | - | - | 2837 | |
| IGFBP5 | - | - | 3306 | |
| AMBN | - | - | 3337 | |
| AMELX | - | -1 | 3396 | |
| KLF10 | - | - | 3457 | |
| DMP1 | - | -1 | 3809 | |
| SP1 | - | - | 4195 | |
| BMP8A | - | - | 4253 | |
| AXIN2 | - | -1 | 4260 | |
| HOXA2 | - | - | 4273 | |
| BMP6 | - | - | 4358 | |
| STATH | - | - | 4554 | |
| SOX8 | - | - | 4609 | |
| WNT3 | - | - | 4613 | |
| RSPO2 | - | - | 4631 | |
| WNT3A | - | - | 4747 | |
| EXT1 | 0.25 | 1 | 4780 | |
| COL2A1 | - | -1 | 4839 | |
| BMP2 | - | -1 | 4855 | |
| MEN1 | - | -1 | 4917 | |
| CBS | 0.25 | 1 | 5018 | |
| PTGS2 | 0.25 | 1 | 5085 | |
| TNFSF11 | - | -1 | 5271 | |
| TNFRSF11A | - | -1 | 5293 | |
| NOG | - | -1 | 5439 | |
| BMP3 | - | - | 5467 | |
| BMP5 | - | - | 5641 | |
| WWOX | - | -1 | 5791 | |
| GLI1 | - | - | 6241 | |
| FGF18 | - | - | 6382 | |
| BMP4 | - | -1 | 6499 | |
| SUCO | - | - | 6813 | |
| IGSF10 | - | - | 6832 | |
| ZBTB40 | - | - | 6974 | |
| CYP24A1 | - | - | 7000 | |
| NPR2 | - | -1 | 7127 | |
| SP7 | - | - | 7138 | |
| IHH | - | -1 | 7160 | |
| CASR | - | - | 7200 | |
| GLI2 | - | -1 | 7307 | |
| BMP8B | - | - | 7381 | |
| MMP8 | - | - | 7429 | |
| ENAM | - | -1 | 7548 | |
| ATP6V0A4 | - | - | 7653 | |
| RIPPLY2 | - | - | 7657 | |
| MMP13 | - | -1 | 7779 | |
| WNT11 | - | - | 7820 | |
| MYF5 | - | - | 7875 | |
| ALOX15 | - | - | 8394 | |
| GPC3 | - | -1 | 8430 | |
| CLEC5A | - | - | 8599 | |
| SLC26A2 | - | -1 | 9142 | |
| SNAI1 | - | - | 9198 | |
| IBSP | - | - | 9324 | |
| NPPC | - | - | 9349 | |
| LRP5 | - | -1 | 9420 | |
| CHRDL2 | - | - | 9776 | |
| PKDCC | - | - | 9871 | |
| FOXC2 | - | - | 10175 | |
| SMO | 0.25 | 1 | 10504 | |
| ATP6V1B1 | - | - | 10564 | |
| OSTN | - | - | 10888 | |
| TUFT1 | - | - | 11007 | |
| TRAF6 | - | - | 11055 | |
| COL13A1 | - | - | 11586 | |
| ASPN | - | - | 11718 | |
| DUOX2 | - | -1 | 11733 | |
| LEP | 0.25 | 1 | 11864 | |
| PDLIM7 | - | - | 12078 | |
| FBXL15 | - | - | 12126 | |
| MYOG | - | - | 12349 | |
| SPP1 | - | - | 12442 | |
| MMP14 | - | - | 12920 | |
| TGFB3 | - | -1 | 13097 | |
| FOXC1 | - | -1 | 13793 | |
| SORT1 | - | - | 14441 | |
| GDF2 | - | - | 14603 | |
| KAZALD1 | - | - | 14757 | |
| PPARGC1B | - | -1 | 15356 | |
| SHH | - | -1 | 18571 | |
| DSPP | - | -1 | 19446 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| FOXS1 | - | - | 20143 | |
| EIF2AK3 | - | - | 20456 | |
| FZD1 | - | - | 20775 | |
| BGLAP | - | - | 20875 | |
| CYP27B1 | - | - | 21369 | |
| SBDS | - | - | 21769 | |
| ERCC2 | - | -1 | 21804 | |
| ASGR2 | - | - | 21838 | |
| OSTF1 | - | - | 21895 | |
| IGF2 | 0.25 | 1 | 22401 | |
| CYR61 | - | - | 22574 | |
| THBS3 | - | - | 23018 | |
| FIGNL1 | 0.25 | 1 | 23587 | |
| MINPP1 | - | -1 | 23831 | |
| MGP | - | - | 23957 | |
| SNAI2 | - | -1 | 23962 | |
| IL18 | - | - | 24018 | |
| CTSK | - | - | 24099 | |
| COL1A1 | - | -1 | 24140 | |
| WWTR1 | - | - | 24317 | |
| MMP9 | - | - | 24369 | |
| IMPAD1 | - | - | 24504 | |
| ECM1 | - | -1 | 24768 | |
| TWSG1 | - | - | 24840 | |
| PEX7 | 0.25 | 1 | 25057 | |
| BMP1 | - | - | 25134 | |
| FSTL3 | - | - | 25154 | |
| EXT2 | - | -1 | 25243 | |
| SPARC | - | - | 25365 | |
| MMP2 | - | - | 25584 |
GO:0001503
| Name | Description | External IDs |
| SATB2 | SATB homeobox 2 | Entrez:23314 Ensembl: ENSG00000119042 HPRD: 12178 HGNC: 21637 |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657 HGNC: 11195 HPRD: 08921 Ensembl: ENSG00000181449 |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| FGF9 | fibroblast growth factor 9 | Entrez:2254 HPRD: 02951 HGNC: 3687 Ensembl: ENSG00000102678 |
| GABBR1 | gamma-aminobutyric acid (GABA) B receptor, 1 | Entrez:2550 HGNC: 4070 Ensembl: ENSG00000204681 HPRD: 04644 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SATB2 | SATB homeobox 2 | ||||
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| FGF9 | fibroblast growth factor 9 | ||||
| GABBR1 | gamma-aminobutyric acid (GABA) B receptor, 1 |
| Query gene | Gene | Gene description | Edge score |
| SATB2 | SATB2 | SATB homeobox 2 | |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| FGF9 | FGF9 | fibroblast growth factor 9 | |
| GABBR1 | GABBR1 | gamma-aminobutyric acid (GABA) B receptor, 1 |