| Gene | Input weight | Standard | Rank | |
| NTRK3 | 0.25 | 1 | 6 | |
| PPP2CA | - | - | 20 | |
| BCL11A | 1.0 | 1 | 32 | |
| SLIT1 | - | - | 61 | |
| TTC3 | - | - | 68 | |
| SOX11 | - | - | 96 | |
| ARHGDIA | - | - | 109 | |
| SEMA4F | - | - | 303 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| PAX6 | 0.25 | 1 | 544 | |
| DICER1 | - | -1 | 762 | |
| BDNF | 0.25 | 1 | 791 | |
| OMG | 0.25 | 1 | 808 | |
| DLL3 | - | -1 | 847 | |
| RUFY3 | - | - | 906 | |
| NR2E1 | 0.25 | 1 | 977 | |
| ULK1 | - | - | 1008 | |
| ID4 | - | - | 1009 | |
| BMP7 | - | - | 1137 | |
| BMPR1A | - | - | 1140 | |
| SMAD7 | - | - | 1192 | |
| THY1 | - | - | 1580 | |
| DCC | - | - | 1687 | |
| YWHAH | - | - | 2009 | |
| XYLT1 | - | -1 | 2057 | |
| MBP | - | - | 2120 | |
| ID2 | - | - | 2154 | |
| RNF6 | - | -1 | 2235 | |
| RHOA | - | - | 2292 | |
| CIT | - | - | 2320 | |
| DLX2 | 0.25 | 1 | 2357 | |
| DLX1 | 0.25 | 1 | 2400 | |
| PTK2 | 0.25 | 1 | 2488 | |
| FGFR3 | - | -1 | 2640 | |
| TTPA | - | - | 2681 | |
| RTN4 | - | - | 2735 | |
| NRP1 | - | - | 2807 | |
| TBX5 | - | - | 2836 | |
| SKI | - | - | 2904 | |
| CITED1 | - | - | 3064 | |
| HOOK3 | - | - | 3126 | |
| MT3 | - | - | 3160 | |
| WNT5A | - | - | 3319 | |
| DAB2IP | - | - | 3482 | |
| SEMA3A | - | - | 3494 | |
| TNR | - | - | 3868 | |
| TSPO | 0.25 | 1 | 4009 | |
| NKX2-1 | - | - | 4142 | |
| DRD3 | 0.25 | 1 | 4349 | |
| WNT3 | - | - | 4613 | |
| NKX6-1 | - | - | 4665 | |
| WNT3A | - | - | 4747 | |
| NKX6-2 | - | - | 4791 | |
| HES5 | - | - | 4919 | |
| DYNLT1 | - | - | 4976 | |
| SFRP2 | - | - | 5252 | |
| RYK | - | - | 5383 | |
| NOG | - | -1 | 5439 | |
| MAG | - | - | 5765 | |
| NTN1 | - | - | 6023 | |
| TLX2 | - | - | 6047 | |
| NGFR | 0.25 | 1 | 6212 | |
| RTN4R | - | - | 6304 | |
| LINGO1 | - | - | 6321 | |
| BMP4 | - | -1 | 6499 | |
| PCM1 | - | -1 | 6569 | |
| TGFBR3 | - | - | 6672 | |
| LIN28A | - | - | 7070 | |
| TRPV1 | 0.25 | 1 | 7162 | |
| WNT7A | - | - | 7312 | |
| VAX1 | - | - | 7419 | |
| FRZB | - | - | 8105 | |
| LRRK2 | - | -1 | 8802 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| CTNNA1 | - | - | 9331 | |
| REST | - | - | 9779 | |
| ASCL2 | - | - | 10237 | |
| SPP1 | - | - | 12442 | |
| WEE2 | - | - | 12601 | |
| IFNG | - | -1 | 12827 | |
| TRIM11 | - | - | 14084 | |
| PSEN1 | - | - | 18523 | |
| F2 | - | -1 | 18599 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| ARHGEF1 | - | - | 21297 | |
| EFNA1 | - | - | 21477 | |
| CTDSP1 | - | - | 21639 | |
| RNF10 | - | - | 22383 | |
| KLK8 | - | - | 22593 | |
| ATF5 | - | - | 24234 |
GO:0010721
| Name | Description | External IDs |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | Entrez:4916 Ensembl: ENSG00000140538 HPRD: 01870 HGNC: 8033 |
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | Entrez:5515 HGNC: 9299 HPRD: 08912 |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | Entrez:53335 Ensembl: ENSG00000119866 HGNC: 13221 HPRD: 05949 |
| SLIT1 | slit homolog 1 (Drosophila) | Entrez:6585 Ensembl: ENSG00000187122 HGNC: 11085 HPRD: 04773 |
| TTC3 | tetratricopeptide repeat domain 3 | Entrez:7267 HPRD: 03773 HGNC: 12393 Ensembl: ENSG00000182670 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | ||||
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | ||||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | ||||
| SLIT1 | slit homolog 1 (Drosophila) | ||||
| TTC3 | tetratricopeptide repeat domain 3 |
| Query gene | Gene | Gene description | Edge score |
| NTRK3 | NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | |
| PPP2CA | PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | |
| BCL11A | BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | |
| SLIT1 | SLIT1 | slit homolog 1 (Drosophila) | |
| TTC3 | TTC3 | tetratricopeptide repeat domain 3 |