| Gene | Input weight | Standard | Rank | |
| SOX2 | - | -1 | 200 | |
| FGF9 | - | - | 262 | |
| APC | 0.25 | 1 | 266 | |
| LRP6 | - | - | 279 | |
| SFRP1 | - | - | 387 | |
| NLK | - | - | 712 | |
| CSNK1E | 0.25 | 1 | 752 | |
| HMGXB4 | - | - | 781 | |
| SOX9 | - | -1 | 970 | |
| APC2 | - | - | 1115 | |
| AES | - | - | 1230 | |
| HDAC2 | - | - | 1440 | |
| CXXC4 | - | - | 1490 | |
| CHD8 | 1.0 | 1 | 1493 | |
| LEF1 | - | - | 1499 | |
| LRP4 | - | - | 1500 | |
| TLE1 | - | - | 1605 | |
| GRB10 | - | - | 1910 | |
| MED12 | 0.25 | 1 | 2052 | |
| MCC | - | - | 2167 | |
| STK4 | - | - | 2276 | |
| DKK2 | - | - | 2331 | |
| SIX3 | - | -1 | 2494 | |
| LATS1 | - | - | 2781 | |
| CTNND1 | - | - | 2948 | |
| EGR1 | - | - | 3062 | |
| CITED1 | - | - | 3064 | |
| WNT5A | - | - | 3319 | |
| DAB2IP | - | - | 3482 | |
| TCF7L2 | 0.5 | 1 | 3548 | |
| SIAH2 | - | - | 3729 | |
| SOX17 | - | - | 4024 | |
| LECT2 | - | - | 4161 | |
| AXIN2 | - | -1 | 4260 | |
| AXIN1 | - | -1 | 4419 | |
| CYLD | - | -1 | 4624 | |
| DRAXIN | - | - | 4717 | |
| SFRP2 | - | - | 5252 | |
| DKK3 | - | - | 5413 | |
| PRICKLE1 | - | -1 | 5552 | |
| CTNNBIP1 | - | - | 5675 | |
| WWOX | - | -1 | 5791 | |
| GLI1 | - | - | 6241 | |
| GLI3 | - | -1 | 6261 | |
| TLE2 | - | - | 6532 | |
| BARX1 | - | - | 6608 | |
| SOST | - | - | 6885 | |
| SCYL2 | - | - | 7130 | |
| SFRP4 | - | - | 7310 | |
| WNT8A | - | - | 7814 | |
| WNT11 | - | - | 7820 | |
| FRZB | - | - | 8105 | |
| GPC3 | - | -1 | 8430 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| TBX18 | - | - | 8991 | |
| TSC2 | 0.25 | 1 | 9351 | |
| GSC | - | - | 9702 | |
| LATS2 | - | - | 9736 | |
| DKK4 | - | - | 10367 | |
| APCDD1 | - | - | 10507 | |
| SFRP5 | - | - | 11273 | |
| DKK1 | - | - | 11567 | |
| NPHP3 | - | -1 | 13474 | |
| MDFI | - | - | 13519 | |
| MESP1 | - | - | 13805 | |
| INVS | - | -1 | 14708 | |
| DDIT3 | - | - | 14883 | |
| WNT5B | - | - | 15534 | |
| TAX1BP3 | - | - | 15553 | |
| SHH | - | -1 | 18571 | |
| FZD6 | - | - | 19921 | |
| JUP | - | -1 | 20291 | |
| FZD1 | - | - | 20775 | |
| STK3 | - | - | 21167 | |
| WNT4 | - | - | 21809 | |
| LRP1 | - | - | 22276 | |
| PFDN5 | - | - | 23272 | |
| GNB2L1 | - | - | 23282 | |
| CBY1 | - | - | 23816 | |
| SNAI2 | - | -1 | 23962 | |
| WWTR1 | - | - | 24317 | |
| DAB2 | - | - | 25338 | |
| CAV1 | - | -1 | 25381 |
GO:0030178
| Name | Description | External IDs |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657 HGNC: 11195 HPRD: 08921 Ensembl: ENSG00000181449 |
| FGF9 | fibroblast growth factor 9 | Entrez:2254 HPRD: 02951 HGNC: 3687 Ensembl: ENSG00000102678 |
| APC | adenomatous polyposis coli | Entrez:324 HGNC: 583 HPRD: 01439 Ensembl: ENSG00000134982 |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040 Ensembl: ENSG00000070018 HGNC: 6698 HPRD: 04617 |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422 HPRD: 09165 Ensembl: ENSG00000104332 HGNC: 10776 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| FGF9 | fibroblast growth factor 9 | ||||
| APC | adenomatous polyposis coli | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| SFRP1 | secreted frizzled-related protein 1 |
| Query gene | Gene | Gene description | Edge score |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| FGF9 | FGF9 | fibroblast growth factor 9 | |
| APC | APC | adenomatous polyposis coli | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 |