| Gene | Input weight | Standard | Rank | |
| NTRK3 | 0.25 | 1 | 6 | |
| PPP2CA | - | - | 20 | |
| BCL11A | 1.0 | 1 | 32 | |
| SLIT1 | - | - | 61 | |
| TTC3 | - | - | 68 | |
| SOX11 | - | - | 96 | |
| ARHGDIA | - | - | 109 | |
| SOX2 | - | -1 | 200 | |
| SOX4 | - | - | 250 | |
| APC | 0.25 | 1 | 266 | |
| LRP6 | - | - | 279 | |
| RARB | 0.25 | 1 | 300 | |
| SEMA4F | - | - | 303 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| ASCL1 | - | - | 413 | |
| SOCS5 | - | - | 463 | |
| TRIB2 | - | - | 472 | |
| PAX6 | 0.25 | 1 | 544 | |
| OLIG2 | - | - | 619 | |
| FOXG1 | - | - | 661 | |
| CNTN2 | - | - | 674 | |
| HDAC4 | - | - | 696 | |
| ZCCHC11 | - | - | 737 | |
| DICER1 | - | -1 | 762 | |
| BDNF | 0.25 | 1 | 791 | |
| OMG | 0.25 | 1 | 808 | |
| SMAD3 | - | - | 823 | |
| ZNF536 | - | - | 839 | |
| DLL3 | - | -1 | 847 | |
| ZFPM2 | - | -1 | 867 | |
| TOB2 | - | - | 880 | |
| RUFY3 | - | - | 906 | |
| CHRD | - | - | 941 | |
| SOX9 | - | -1 | 970 | |
| NR2E1 | 0.25 | 1 | 977 | |
| ULK1 | - | - | 1008 | |
| ID4 | - | - | 1009 | |
| CALCA | - | - | 1013 | |
| NKX2-2 | - | - | 1120 | |
| MAPK1 | - | - | 1128 | |
| BMP7 | - | - | 1137 | |
| BMPR1A | - | - | 1140 | |
| MIB1 | 0.25 | 1 | 1153 | |
| SUZ12 | - | - | 1188 | |
| SMAD7 | - | - | 1192 | |
| ZHX2 | - | - | 1216 | |
| SIRT1 | - | - | 1233 | |
| GPR98 | - | -1 | 1237 | |
| LDB2 | - | - | 1347 | |
| FZD7 | - | - | 1357 | |
| RUNX1 | - | -1 | 1449 | |
| APP | - | - | 1515 | |
| WNT10B | - | - | 1517 | |
| THY1 | - | - | 1580 | |
| DCC | - | - | 1687 | |
| JAG1 | - | -1 | 1704 | |
| VANGL2 | - | - | 1793 | |
| CDK6 | - | - | 1795 | |
| PTBP1 | - | - | 1894 | |
| PHOX2B | - | - | 1917 | |
| HDAC5 | - | - | 1950 | |
| CARTPT | 0.25 | 1 | 1957 | |
| ISL1 | - | - | 1974 | |
| PTHLH | - | -1 | 1993 | |
| YWHAH | - | - | 2009 | |
| DLL1 | - | - | 2053 | |
| XYLT1 | - | -1 | 2057 | |
| MBP | - | - | 2120 | |
| ID2 | - | - | 2154 | |
| RC3H1 | - | - | 2217 | |
| RNF6 | - | -1 | 2235 | |
| FGFR1 | - | - | 2262 | |
| NR0B1 | - | -1 | 2278 | |
| RHOA | - | - | 2292 | |
| SOX3 | - | - | 2303 | |
| CIT | - | - | 2320 | |
| DLX2 | 0.25 | 1 | 2357 | |
| GATA3 | - | - | 2376 | |
| DLX1 | 0.25 | 1 | 2400 | |
| PTK2 | 0.25 | 1 | 2488 | |
| CNTN4 | 1.0 | 1 | 2492 | |
| INSIG1 | - | - | 2529 | |
| BCL6 | - | - | 2550 | |
| SOX21 | - | - | 2559 | |
| STAT5B | - | - | 2593 | |
| NKX3-2 | - | - | 2620 | |
| FGFR3 | - | -1 | 2640 | |
| FOXA2 | - | - | 2645 | |
| TTPA | - | - | 2681 | |
| RTN4 | - | - | 2735 | |
| IGF1 | 0.25 | 1 | 2793 | |
| NRP1 | - | - | 2807 | |
| TBX5 | - | - | 2836 | |
| NOTCH1 | - | -1 | 2865 | |
| SKIL | - | - | 2889 | |
| SKI | - | - | 2904 | |
| TBX3 | - | - | 2958 | |
| CITED1 | - | - | 3064 | |
| HOOK3 | - | - | 3126 | |
| NODAL | - | -1 | 3149 | |
| MT3 | - | - | 3160 | |
| ZFHX3 | - | -1 | 3201 | |
| GATA2 | - | -1 | 3291 | |
| ZFP36 | - | - | 3314 | |
| WNT5A | - | - | 3319 | |
| WNT8B | - | - | 3407 | |
| HOXA7 | - | - | 3411 | |
| KLF10 | - | - | 3457 | |
| DAB2IP | - | - | 3482 | |
| SEMA3A | - | - | 3494 | |
| KLF4 | - | - | 3609 | |
| RARA | 0.25 | 1 | 3695 | |
| NME2 | - | - | 3712 | |
| DIXDC1 | - | - | 3734 | |
| LRRC17 | - | - | 3841 | |
| TNR | - | - | 3868 | |
| FGF23 | - | -1 | 3888 | |
| ITGB1 | - | - | 3903 | |
| PRMT1 | - | - | 4008 | |
| TSPO | 0.25 | 1 | 4009 | |
| FLT3 | - | -1 | 4055 | |
| CDX2 | - | - | 4071 | |
| NANOG | - | - | 4083 | |
| GDF11 | - | - | 4104 | |
| SLC6A4 | 0.25 | 1 | 4137 | |
| GSK3A | - | - | 4141 | |
| NKX2-1 | - | - | 4142 | |
| PPARA | - | - | 4177 | |
| LMX1A | - | - | 4236 | |
| RBM15 | - | - | 4247 | |
| ZBTB16 | - | - | 4249 | |
| AXIN2 | - | -1 | 4260 | |
| HOXA2 | - | - | 4273 | |
| TET1 | - | - | 4338 | |
| PRDM16 | - | - | 4345 | |
| DRD3 | 0.25 | 1 | 4349 | |
| WNT1 | - | - | 4383 | |
| AXIN1 | - | -1 | 4419 | |
| ESRRB | 0.25 | 1 | 4453 | |
| FGF10 | - | -1 | 4532 | |
| HOPX | - | - | 4550 | |
| SOX8 | - | - | 4609 | |
| WNT3 | - | - | 4613 | |
| NKX6-1 | - | - | 4665 | |
| ABCA1 | - | -1 | 4703 | |
| WNT3A | - | - | 4747 | |
| INHA | - | - | 4765 | |
| NKX6-2 | - | - | 4791 | |
| PIWIL2 | - | - | 4828 | |
| MEN1 | - | -1 | 4917 | |
| HES5 | - | - | 4919 | |
| FGF4 | - | - | 4938 | |
| DYNLT1 | - | - | 4976 | |
| THOC5 | - | - | 4981 | |
| HOXA5 | - | - | 5132 | |
| IFNB1 | - | - | 5250 | |
| SFRP2 | - | - | 5252 | |
| USH2A | - | -1 | 5253 | |
| DTX1 | - | - | 5290 | |
| HIST1H4C | - | - | 5314 | |
| RYK | - | - | 5383 | |
| NOG | - | -1 | 5439 | |
| HIST1H4F | - | - | 5483 | |
| PRDX2 | - | - | 5497 | |
| NFKBIA | - | - | 5569 | |
| ZNF358 | - | - | 5591 | |
| OSR1 | - | - | 5691 | |
| MAG | - | - | 5765 | |
| HES1 | 0.25 | 1 | 5912 | |
| NTN1 | - | - | 6023 | |
| ADIPOQ | 0.25 | 1 | 6032 | |
| TLX2 | - | - | 6047 | |
| CRP | - | - | 6053 | |
| ENPP1 | - | -1 | 6091 | |
| NR1H2 | - | - | 6183 | |
| NGFR | 0.25 | 1 | 6212 | |
| GLI3 | - | -1 | 6261 | |
| RTN4R | - | - | 6304 | |
| SIX2 | - | - | 6306 | |
| LINGO1 | - | - | 6321 | |
| TLX3 | - | - | 6462 | |
| BMP4 | - | -1 | 6499 | |
| PCM1 | - | -1 | 6569 | |
| NOTCH2 | - | -1 | 6664 | |
| TGFBR3 | - | - | 6672 | |
| IL4 | - | - | 6852 | |
| CTLA4 | - | - | 6866 | |
| TWIST1 | - | -1 | 6980 | |
| HIST1H4B | - | - | 7028 | |
| LIN28A | - | - | 7070 | |
| IHH | - | -1 | 7160 | |
| TRPV1 | 0.25 | 1 | 7162 | |
| LIG4 | - | -1 | 7187 | |
| TNFSF4 | - | - | 7262 | |
| TGFBR1 | - | -1 | 7268 | |
| CETP | - | - | 7301 | |
| WNT7A | - | - | 7312 | |
| VAX1 | - | - | 7419 | |
| IRX3 | - | - | 7476 | |
| FOXJ1 | - | - | 7628 | |
| IFNA2 | - | - | 7694 | |
| FRZB | - | - | 8105 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| RARG | 0.25 | 1 | 8575 | |
| GPR55 | - | - | 8693 | |
| HIST1H4A | - | - | 8765 | |
| LRRK2 | - | -1 | 8802 | |
| HIST1H4E | - | - | 8846 | |
| ID1 | - | - | 9040 | |
| EREG | - | - | 9052 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| LBX1 | - | - | 9134 | |
| SNAI1 | - | - | 9198 | |
| PRAME | - | - | 9222 | |
| HIST4H4 | - | - | 9288 | |
| CTNNA1 | - | - | 9331 | |
| FOXO4 | - | - | 9362 | |
| LRP5 | - | -1 | 9420 | |
| HIST1H4I | - | - | 9593 | |
| REST | - | - | 9779 | |
| MBNL3 | - | - | 10070 | |
| IFNL1 | - | - | 10151 | |
| ASCL2 | - | - | 10237 | |
| NANOS2 | - | - | 10402 | |
| OVOL2 | - | - | 10428 | |
| LDB1 | - | - | 10693 | |
| MAFB | - | - | 10783 | |
| VPS72 | - | - | 10808 | |
| OSTN | - | - | 10888 | |
| RIF1 | - | - | 11422 | |
| HIST1H4K | - | - | 11490 | |
| RHOC | - | - | 11655 | |
| ZNF675 | - | - | 11676 | |
| ITGB3 | 0.5 | 1 | 11817 | |
| HIST1H4H | - | - | 11835 | |
| HIST2H4B | - | - | 12217 | |
| HIST1H4L | - | - | 12237 | |
| TCF7L1 | - | - | 12273 | |
| SPP1 | - | - | 12442 | |
| WEE2 | - | - | 12601 | |
| IL6 | - | -1 | 12695 | |
| ABCA5 | - | - | 12710 | |
| TLR4 | - | -1 | 12795 | |
| IFNG | - | -1 | 12827 | |
| NFKBID | - | - | 13229 | |
| PRDM6 | - | - | 13349 | |
| UCMA | - | - | 13359 | |
| WNT9A | - | - | 13365 | |
| NPHP3 | - | -1 | 13474 | |
| NME1 | - | -1 | 13556 | |
| MESP1 | - | - | 13805 | |
| NMRK2 | - | - | 14041 | |
| TRIM11 | - | - | 14084 | |
| LMO2 | - | - | 14404 | |
| FOXO6 | - | - | 14502 | |
| NRARP | - | - | 14597 | |
| HDAC7 | - | - | 14702 | |
| FST | - | - | 14783 | |
| C1QC | - | - | 15231 | |
| TNF | 0.25 | 1 | 15243 | |
| TWIST2 | - | - | 15321 | |
| HIST1H4D | - | - | 15824 | |
| NBN | - | -1 | 16066 | |
| INHBA | - | - | 16974 | |
| PF4 | - | - | 17209 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| F2 | - | -1 | 18599 | |
| TP73 | - | - | 18810 | |
| RCAN1 | - | - | 18854 | |
| NOTCH4 | - | - | 19230 | |
| POU5F1 | - | - | 19704 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| JUP | - | -1 | 20291 | |
| JAK3 | - | - | 20340 | |
| IL4R | - | - | 20610 | |
| TRIB3 | - | - | 20863 | |
| ABCG1 | - | - | 21175 | |
| STAT5A | - | - | 21176 | |
| ARHGEF1 | - | - | 21297 | |
| HIST1H4J | - | - | 21464 | |
| EFNA1 | - | - | 21477 | |
| TCL1A | - | - | 21526 | |
| CTDSP1 | - | - | 21639 | |
| WNT4 | - | - | 21809 | |
| NOTCH3 | - | - | 22114 | |
| LIF | - | - | 22134 | |
| CALR | - | - | 22152 | |
| CCDC85B | - | - | 22207 | |
| RNF10 | - | - | 22383 | |
| NBR1 | - | - | 22425 | |
| YAP1 | - | - | 22469 | |
| TLR3 | - | - | 22478 | |
| TP63 | - | -1 | 22528 | |
| KLK8 | - | - | 22593 | |
| ID3 | - | - | 22679 | |
| SOD2 | - | - | 22687 | |
| PPARG | - | -1 | 22729 | |
| HIST2H4A | - | - | 22838 | |
| PRPF19 | - | - | 22991 | |
| C14orf169 | - | - | 23070 | |
| TGFB1I1 | - | - | 23709 | |
| INPP5D | - | - | 23776 | |
| SNAI2 | - | -1 | 23962 | |
| CD74 | - | - | 24030 | |
| SPDEF | - | - | 24165 | |
| ATF5 | - | - | 24234 | |
| WWTR1 | - | - | 24317 | |
| ZC3H8 | - | - | 24341 | |
| IQCB1 | - | -1 | 24416 | |
| TWSG1 | - | - | 24840 | |
| ASPM | - | -1 | 24942 | |
| NR1H3 | - | - | 25006 | |
| NME1-NME2 | - | - | 25082 | |
| FSTL3 | - | - | 25154 | |
| TPT1 | - | - | 25343 | |
| EFEMP1 | - | - | 25366 | |
| CAV1 | - | -1 | 25381 | |
| ITGAV | - | - | 25460 |
GO:0045596
| Name | Description | External IDs |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | Entrez:4916  Ensembl: ENSG00000140538  HPRD: 01870  HGNC: 8033  |
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | Entrez:5515  HGNC: 9299  HPRD: 08912  |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | Entrez:53335  Ensembl: ENSG00000119866  HGNC: 13221  HPRD: 05949  |
| SLIT1 | slit homolog 1 (Drosophila) | Entrez:6585  Ensembl: ENSG00000187122  HGNC: 11085  HPRD: 04773  |
| TTC3 | tetratricopeptide repeat domain 3 | Entrez:7267  HPRD: 03773  HGNC: 12393  Ensembl: ENSG00000182670  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | ||||
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | ||||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | ||||
| SLIT1 | slit homolog 1 (Drosophila) | ||||
| TTC3 | tetratricopeptide repeat domain 3 |
| Query gene | Gene | Gene description | Edge score |
| NTRK3 | NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | |
| PPP2CA | PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | |
| BCL11A | BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | |
| SLIT1 | SLIT1 | slit homolog 1 (Drosophila) | |
| TTC3 | TTC3 | tetratricopeptide repeat domain 3 |