| Gene | Input weight | Standard | Rank | |
| ATP2B2 | 0.5 | 1 | 3 | |
| NIPBL | - | -1 | 7 | |
| GNB1 | - | - | 24 | |
| NTRK2 | 0.25 | 1 | 51 | |
| SOX11 | - | - | 96 | |
| NEUROD1 | - | -1 | 127 | |
| EPHB1 | - | - | 176 | |
| SOX2 | - | -1 | 200 | |
| APC | 0.25 | 1 | 266 | |
| LRP6 | - | - | 279 | |
| BMPR2 | - | -1 | 281 | |
| RORB | - | - | 283 | |
| RARB | 0.25 | 1 | 300 | |
| HIPK1 | - | - | 311 | |
| PDGFRA | - | -1 | 320 | |
| DSCAM | 1.0 | 1 | 330 | |
| MYH10 | - | - | 366 | |
| NF1 | 0.25 | 1 | 372 | |
| CHD7 | - | -1 | 416 | |
| YY1 | - | - | 419 | |
| MEIS1 | - | - | 450 | |
| CALB1 | 0.25 | 1 | 484 | |
| PAX6 | 0.25 | 1 | 544 | |
| SP3 | - | - | 562 | |
| PRKCI | - | - | 568 | |
| PAX2 | - | - | 653 | |
| POU4F2 | - | - | 819 | |
| SMAD3 | - | - | 823 | |
| TGFB2 | - | - | 834 | |
| SHROOM2 | - | - | 937 | |
| SOX9 | - | -1 | 970 | |
| NR2E1 | 0.25 | 1 | 977 | |
| PROX1 | - | - | 997 | |
| MED1 | - | - | 1034 | |
| MEIS2 | - | - | 1041 | |
| HIPK2 | - | - | 1051 | |
| BCL11B | - | - | 1125 | |
| BMP7 | - | - | 1137 | |
| CNGA3 | - | -1 | 1255 | |
| PVRL3 | - | - | 1324 | |
| MAB21L1 | - | - | 1377 | |
| RHO | - | -1 | 1379 | |
| HDAC2 | - | - | 1440 | |
| THY1 | - | - | 1580 | |
| WNT2B | - | - | 1673 | |
| OLFM3 | - | - | 1964 | |
| ACHE | - | - | 2025 | |
| COL8A1 | - | - | 2181 | |
| FZD4 | - | -1 | 2229 | |
| WNT2 | 0.25 | 1 | 2299 | |
| BMPR1B | - | -1 | 2316 | |
| SIX3 | - | -1 | 2494 | |
| LHX1 | - | - | 2560 | |
| GRM6 | - | -1 | 2585 | |
| FGFR3 | - | -1 | 2640 | |
| TULP3 | - | - | 2770 | |
| MAB21L2 | - | - | 2779 | |
| SKIL | - | - | 2889 | |
| SKI | - | - | 2904 | |
| FZR1 | - | - | 2920 | |
| TFAP2A | - | -1 | 2923 | |
| VSX1 | - | - | 3107 | |
| TGIF2 | - | - | 3180 | |
| ATP2B4 | - | - | 3217 | |
| TGIF1 | - | -1 | 3264 | |
| WNT5A | - | - | 3319 | |
| MAX | - | - | 3376 | |
| MAP3K1 | - | -1 | 3381 | |
| WNT8B | - | - | 3407 | |
| RBP4 | - | - | 3448 | |
| CDON | - | - | 3487 | |
| VAX2 | - | - | 3553 | |
| PRPH2 | - | -1 | 3569 | |
| KLF4 | - | - | 3609 | |
| NPHP4 | - | -1 | 3630 | |
| FOXE3 | - | -1 | 3688 | |
| BHLHE22 | - | - | 3704 | |
| DIXDC1 | - | - | 3734 | |
| CRYGC | - | - | 3739 | |
| ALDH1A2 | - | - | 3771 | |
| NRL | - | -1 | 3810 | |
| DLG1 | - | - | 3822 | |
| FOXE1 | - | -1 | 3900 | |
| HSF4 | - | - | 3988 | |
| SMOC1 | - | - | 4061 | |
| VEGFA | 0.25 | 1 | 4087 | |
| LPCAT1 | - | - | 4088 | |
| GDF11 | - | - | 4104 | |
| WNT16 | - | - | 4117 | |
| FOXP2 | 0.5 | 1 | 4163 | |
| SP1 | - | - | 4195 | |
| NEUROD4 | - | - | 4242 | |
| BMP6 | - | - | 4358 | |
| AGTPBP1 | - | - | 4391 | |
| AXIN1 | - | -1 | 4419 | |
| PVRL1 | - | - | 4430 | |
| RAX | - | -1 | 4486 | |
| WT1 | - | -1 | 4514 | |
| FGF10 | - | -1 | 4532 | |
| LMX1B | 0.5 | 1 | 4551 | |
| SOX8 | - | - | 4609 | |
| PTPRM | - | - | 4769 | |
| IRX5 | - | - | 4848 | |
| TH | 0.25 | 1 | 4933 | |
| CRYGA | - | - | 4941 | |
| CYP1A1 | 0.25 | 1 | 5067 | |
| WNT6 | - | - | 5106 | |
| PROM1 | - | -1 | 5137 | |
| CRYBA1 | - | - | 5325 | |
| RPGRIP1 | - | -1 | 5348 | |
| RP1 | - | -1 | 5366 | |
| GNAT2 | - | - | 5443 | |
| FASLG | - | -1 | 5523 | |
| PTF1A | - | - | 5721 | |
| CRB1 | - | -1 | 5780 | |
| SH3PXD2B | - | - | 5790 | |
| CST3 | - | -1 | 5894 | |
| NF2 | - | -1 | 5991 | |
| MIP | - | - | 6085 | |
| BHLHE23 | - | - | 6162 | |
| GLI3 | - | -1 | 6261 | |
| VSX2 | - | -1 | 6270 | |
| FOXL1 | - | - | 6313 | |
| MITF | - | -1 | 6345 | |
| IFT122 | - | -1 | 6355 | |
| CLN8 | - | -1 | 6415 | |
| BMP4 | - | -1 | 6499 | |
| JMJD6 | - | - | 6597 | |
| PKNOX1 | - | - | 6662 | |
| CRYBA4 | - | - | 6786 | |
| MERTK | - | - | 6878 | |
| GAS1 | - | - | 6937 | |
| TWIST1 | - | -1 | 6980 | |
| WNT7B | - | - | 7113 | |
| IHH | - | -1 | 7160 | |
| FRS2 | - | - | 7173 | |
| WNT7A | - | - | 7312 | |
| VAX1 | - | - | 7419 | |
| FOXL2 | - | -1 | 7521 | |
| WNT8A | - | - | 7814 | |
| MYF5 | - | - | 7875 | |
| BFSP1 | - | - | 7889 | |
| MYO7A | - | -1 | 8064 | |
| PDE6C | - | -1 | 8075 | |
| HCN1 | - | - | 8103 | |
| RD3 | - | -1 | 8143 | |
| ZNF513 | - | -1 | 8206 | |
| WNT9B | - | - | 8217 | |
| KDM2B | - | - | 8359 | |
| CRYGS | - | - | 8422 | |
| STAT3 | - | -1 | 8538 | |
| RARG | 0.25 | 1 | 8575 | |
| BFSP2 | - | - | 8586 | |
| CRYBB2 | - | - | 8691 | |
| AQP5 | - | - | 8735 | |
| CABP4 | - | -1 | 8825 | |
| RING1 | - | - | 8843 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| CRYGB | - | - | 9219 | |
| RDH10 | - | - | 9300 | |
| GNGT1 | - | - | 9308 | |
| LRP5 | - | -1 | 9420 | |
| CASP2 | - | - | 9480 | |
| RAB3GAP1 | - | - | 9492 | |
| SLC7A11 | - | - | 9692 | |
| CRX | - | -1 | 9828 | |
| TULP1 | - | -1 | 10015 | |
| BBS4 | - | -1 | 10131 | |
| FOXC2 | - | - | 10175 | |
| PDE6A | - | - | 10187 | |
| SMO | 0.25 | 1 | 10504 | |
| CRYAA | - | - | 10509 | |
| STRA6 | - | -1 | 10685 | |
| GDF3 | - | -1 | 10819 | |
| PYGO2 | - | - | 11014 | |
| CEP290 | - | -1 | 11184 | |
| GJA8 | - | - | 11252 | |
| MFN2 | - | -1 | 11607 | |
| CACNA1F | 0.25 | 1 | 11612 | |
| TSPAN12 | 0.25 | 1 | 11967 | |
| NPHP1 | - | -1 | 12095 | |
| HDAC1 | - | - | 12825 | |
| RPGR | - | -1 | 12879 | |
| WNT9A | - | - | 13365 | |
| FOXC1 | - | -1 | 13793 | |
| NES | - | - | 14479 | |
| BLOC1S3 | - | - | 14755 | |
| FSCN2 | - | -1 | 15241 | |
| WNT5B | - | - | 15534 | |
| INHBA | - | - | 16974 | |
| SHH | - | -1 | 18571 | |
| PITX3 | 0.25 | 1 | 19326 | |
| RNPEP | - | - | 19397 | |
| GNAT1 | - | -1 | 19999 | |
| COL5A2 | - | -1 | 20084 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| FOXS1 | - | - | 20143 | |
| TDRD7 | - | - | 20348 | |
| OSR2 | - | - | 20931 | |
| RPGRIP1L | - | - | 21472 | |
| ALDH1A3 | - | - | 21739 | |
| SIX5 | - | -1 | 21823 | |
| LIF | - | - | 22134 | |
| COL8A2 | - | -1 | 22151 | |
| CYP1B1 | 0.25 | 1 | 22210 | |
| RCN1 | - | - | 23013 | |
| CASP6 | - | - | 23087 | |
| PDGFRB | - | - | 23242 | |
| FZD5 | - | - | 23249 | |
| PPP1R13L | - | - | 23749 | |
| HPS1 | - | -1 | 24327 | |
| TWSG1 | - | - | 24840 | |
| CRYAB | - | -1 | 24965 | |
| NAGLU | - | -1 | 25261 | |
| COL5A1 | - | -1 | 25296 | |
| LAMB2 | - | - | 25730 |
GO:0001654
| Name | Description | External IDs |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | Entrez:491 HGNC: 815 Ensembl: ENSG00000157087 HPRD: 00160 |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836 HPRD: 10560 HGNC: 28862 Ensembl: ENSG00000164190 |
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | Entrez:2782 HGNC: 4396 HPRD: 00766 Ensembl: ENSG00000078369 |
| NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | Entrez:4915 Ensembl: ENSG00000148053 HPRD: 02712 HGNC: 8032 |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664 HGNC: 11191 Ensembl: ENSG00000176887 HPRD: 02940 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | ||||
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | ||||
| NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | ||||
| SOX11 | SRY (sex determining region Y)-box 11 |
| Query gene | Gene | Gene description | Edge score |
| ATP2B2 | ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| GNB1 | GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | |
| NTRK2 | NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 |