| Gene | Input weight | Standard | Rank | |
| FGFR2 | - | -1 | 237 | |
| FGF9 | - | - | 262 | |
| SFRP1 | - | - | 387 | |
| RUNX2 | - | -1 | 480 | |
| SALL1 | - | - | 506 | |
| ZIC1 | - | - | 939 | |
| CHRD | - | - | 941 | |
| PTCH1 | - | -1 | 972 | |
| SALL3 | - | - | 1487 | |
| OTX2 | - | -1 | 1916 | |
| PRRX1 | - | - | 2125 | |
| FGFR3 | - | -1 | 2640 | |
| SHOX2 | - | - | 2767 | |
| TULP3 | - | - | 2770 | |
| HHIP | - | - | 2786 | |
| C2CD3 | - | - | 2994 | |
| SERPINE2 | - | - | 3708 | |
| FGF10 | - | -1 | 4532 | |
| POR | 0.25 | 1 | 5184 | |
| GLI1 | - | - | 6241 | |
| GLI3 | - | -1 | 6261 | |
| GAS1 | - | - | 6937 | |
| WNT7B | - | - | 7113 | |
| IHH | - | -1 | 7160 | |
| GPC3 | - | -1 | 8430 | |
| CTNNA1 | - | - | 9331 | |
| SUFU | - | -1 | 9372 | |
| CD3E | - | - | 9680 | |
| KIF7 | - | -1 | 9825 | |
| SMO | 0.25 | 1 | 10504 | |
| FUZ | - | - | 12978 | |
| WNT9A | - | - | 13365 | |
| SHH | - | -1 | 18571 | |
| RAB23 | - | - | 20831 | |
| STK36 | - | - | 21217 | |
| RPGRIP1L | - | - | 21472 | |
| DISP1 | - | - | 22983 | |
| PRRX2 | - | - | 23936 |
GO:0008589
| Name | Description | External IDs |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| FGF9 | fibroblast growth factor 9 | Entrez:2254  HPRD: 02951  HGNC: 3687  Ensembl: ENSG00000102678  |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422  HPRD: 09165  Ensembl: ENSG00000104332  HGNC: 10776  |
| RUNX2 | runt-related transcription factor 2 | Entrez:860  Ensembl: ENSG00000124813  HGNC: 10472  HPRD: 02566  |
| SALL1 | sal-like 1 (Drosophila) | Entrez:6299  HGNC: 10524  Ensembl: ENSG00000103449  HPRD: 03742  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| FGF9 | fibroblast growth factor 9 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| RUNX2 | runt-related transcription factor 2 | ||||
| SALL1 | sal-like 1 (Drosophila) |
| Query gene | Gene | Gene description | Edge score |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| FGF9 | FGF9 | fibroblast growth factor 9 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| RUNX2 | RUNX2 | runt-related transcription factor 2 | |
| SALL1 | SALL1 | sal-like 1 (Drosophila) |