| Gene | Input weight | Standard | Rank | |
| FGFR2 | - | -1 | 237 | |
| LRP6 | - | - | 279 | |
| RARB | 0.25 | 1 | 300 | |
| MEF2C | 0.25 | 1 | 428 | |
| RUNX2 | - | -1 | 480 | |
| NAB1 | - | - | 656 | |
| SOX9 | - | -1 | 970 | |
| NAB2 | - | - | 1372 | |
| GNAS | - | -1 | 1842 | |
| PTHLH | - | -1 | 1993 | |
| MSX2 | - | -1 | 2260 | |
| INSIG1 | - | - | 2529 | |
| FGFR3 | - | -1 | 2640 | |
| DLX5 | - | - | 2706 | |
| SHOX2 | - | - | 2767 | |
| MEF2A | - | - | 2837 | |
| SKI | - | - | 2904 | |
| TFAP2A | - | -1 | 2923 | |
| RARA | 0.25 | 1 | 3695 | |
| GLG1 | - | - | 4233 | |
| AXIN2 | - | -1 | 4260 | |
| BMP6 | - | - | 4358 | |
| HOXA11 | - | - | 4432 | |
| CARM1 | - | - | 4755 | |
| COL2A1 | - | -1 | 4839 | |
| FGF4 | - | - | 4938 | |
| CBS | 0.25 | 1 | 5018 | |
| HOXD11 | 0.25 | 1 | 5105 | |
| SFRP2 | - | - | 5252 | |
| GLI3 | - | -1 | 6261 | |
| FGF18 | - | - | 6382 | |
| BMP4 | - | -1 | 6499 | |
| CDX1 | - | - | 6685 | |
| TWIST1 | - | -1 | 6980 | |
| RARG | 0.25 | 1 | 8575 | |
| NPPC | - | - | 9349 | |
| LRP5 | - | -1 | 9420 | |
| GHR | - | -1 | 10098 | |
| INSIG2 | - | - | 10252 | |
| COL13A1 | - | - | 11586 | |
| TGFB3 | - | -1 | 13097 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| OSR2 | - | - | 20931 | |
| THBS3 | - | - | 23018 | |
| COL1A1 | - | -1 | 24140 | |
| IMPAD1 | - | - | 24504 | |
| ACP5 | - | - | 25019 | |
| PEX7 | 0.25 | 1 | 25057 |
GO:0060349
| Name | Description | External IDs |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040 Ensembl: ENSG00000070018 HGNC: 6698 HPRD: 04617 |
| RARB | retinoic acid receptor, beta | Entrez:5915 HPRD: 07183 Ensembl: ENSG00000077092 HGNC: 9865 |
| MEF2C | myocyte enhancer factor 2C | Entrez:4208 HGNC: 6996 Ensembl: ENSG00000081189 HPRD: 02809 |
| RUNX2 | runt-related transcription factor 2 | Entrez:860 Ensembl: ENSG00000124813 HGNC: 10472 HPRD: 02566 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| RARB | retinoic acid receptor, beta | ||||
| MEF2C | myocyte enhancer factor 2C | ||||
| RUNX2 | runt-related transcription factor 2 |
| Query gene | Gene | Gene description | Edge score |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| RARB | RARB | retinoic acid receptor, beta | |
| MEF2C | MEF2C | myocyte enhancer factor 2C | |
| RUNX2 | RUNX2 | runt-related transcription factor 2 |