| Gene | Input weight | Standard | Rank | |
| NTRK3 | 0.25 | 1 | 6 | |
| GAP43 | - | - | 60 | |
| ERBB4 | 0.25 | 1 | 86 | |
| NEUROD1 | - | -1 | 127 | |
| SOX2 | - | -1 | 200 | |
| FGFR2 | - | -1 | 237 | |
| HIPK1 | - | - | 311 | |
| SFRP1 | - | - | 387 | |
| ASCL1 | - | - | 413 | |
| MEF2C | 0.25 | 1 | 428 | |
| POU4F1 | - | - | 475 | |
| RUNX2 | - | -1 | 480 | |
| SALL1 | - | - | 506 | |
| PAX6 | 0.25 | 1 | 544 | |
| OLIG2 | - | - | 619 | |
| PAX2 | - | - | 653 | |
| SMARCA4 | - | - | 801 | |
| SMAD4 | - | - | 821 | |
| MCL1 | - | - | 926 | |
| SOX9 | - | -1 | 970 | |
| NR2E1 | 0.25 | 1 | 977 | |
| PROX1 | - | - | 997 | |
| HIPK2 | - | - | 1051 | |
| NKX2-2 | - | - | 1120 | |
| CDC42 | - | - | 1138 | |
| SPRY2 | - | - | 1454 | |
| JAG2 | - | - | 1612 | |
| WNT2B | - | - | 1673 | |
| ONECUT2 | - | - | 1700 | |
| JAG1 | - | -1 | 1704 | |
| CYP26B1 | - | - | 1734 | |
| SMAD1 | - | - | 1872 | |
| FGF1 | - | - | 1892 | |
| SOX6 | - | - | 1923 | |
| ISL1 | - | - | 1974 | |
| FOXA1 | - | - | 1990 | |
| SOX12 | - | - | 2041 | |
| DLL1 | - | - | 2053 | |
| ID2 | - | - | 2154 | |
| FGFR1 | - | - | 2262 | |
| WNT2 | 0.25 | 1 | 2299 | |
| DLX2 | 0.25 | 1 | 2357 | |
| GATA3 | - | - | 2376 | |
| CHRDL1 | - | - | 2383 | |
| DLX1 | 0.25 | 1 | 2400 | |
| SIX3 | - | -1 | 2494 | |
| TAL1 | - | - | 2544 | |
| DSCAML1 | - | - | 2579 | |
| FGFR3 | - | -1 | 2640 | |
| FOXA2 | - | - | 2645 | |
| SMAD2 | - | - | 2694 | |
| MEF2A | - | - | 2837 | |
| NOTCH1 | - | -1 | 2865 | |
| POU6F2 | 0.25 | 1 | 2898 | |
| NR2F2 | - | - | 2941 | |
| NEUROG2 | - | - | 2989 | |
| MYOD1 | - | - | 3005 | |
| NODAL | - | -1 | 3149 | |
| GSX1 | - | - | 3159 | |
| NTF3 | 0.25 | 1 | 3232 | |
| LHX6 | - | - | 3241 | |
| GATA2 | - | -1 | 3291 | |
| WNT8B | - | - | 3407 | |
| CDON | - | - | 3487 | |
| TCF7L2 | 0.5 | 1 | 3548 | |
| PAX7 | - | -1 | 3577 | |
| KLF4 | - | - | 3609 | |
| ITGB1 | - | - | 3903 | |
| SOX17 | - | - | 4024 | |
| HOXA13 | - | - | 4036 | |
| NANOG | - | - | 4083 | |
| NKX2-1 | - | - | 4142 | |
| NEUROD4 | - | - | 4242 | |
| HOXA2 | - | - | 4273 | |
| PRDM1 | - | - | 4368 | |
| WNT1 | - | - | 4383 | |
| MYF6 | - | - | 4400 | |
| AXIN1 | - | -1 | 4419 | |
| HOXA11 | - | - | 4432 | |
| WT1 | - | -1 | 4514 | |
| FGF10 | - | -1 | 4532 | |
| HOXD10 | - | - | 4534 | |
| BARHL2 | - | - | 4545 | |
| SOX8 | - | - | 4609 | |
| WNT3 | - | - | 4613 | |
| NEUROG1 | 0.25 | 1 | 4644 | |
| GDNF | - | -1 | 4658 | |
| NKX6-1 | - | - | 4665 | |
| FGF3 | - | - | 4687 | |
| WNT3A | - | - | 4747 | |
| NKX6-2 | - | - | 4791 | |
| KDR | 0.25 | 1 | 4854 | |
| BMP2 | - | -1 | 4855 | |
| HES5 | - | - | 4919 | |
| HOXC10 | - | - | 5156 | |
| PTF1A | - | - | 5721 | |
| MNX1 | - | - | 5812 | |
| HES1 | 0.25 | 1 | 5912 | |
| PRDM14 | - | - | 5965 | |
| EYA2 | - | - | 6194 | |
| GLI3 | - | -1 | 6261 | |
| VSX2 | - | -1 | 6270 | |
| SIX2 | - | - | 6306 | |
| MITF | - | -1 | 6345 | |
| TCF3 | - | - | 6420 | |
| TLX3 | - | - | 6462 | |
| BMP4 | - | -1 | 6499 | |
| RAG2 | - | - | 6509 | |
| FOXI1 | - | -1 | 6510 | |
| NOTCH2 | - | -1 | 6664 | |
| GDF7 | - | - | 6682 | |
| GAS1 | - | - | 6937 | |
| IHH | - | -1 | 7160 | |
| FRS2 | - | - | 7173 | |
| TGFBR1 | - | -1 | 7268 | |
| GLI2 | - | -1 | 7307 | |
| WNT8A | - | - | 7814 | |
| TLX1 | - | - | 7842 | |
| MYF5 | - | - | 7875 | |
| GCM1 | - | - | 8388 | |
| TBX2 | - | - | 8392 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| GSX2 | - | - | 8581 | |
| MYL2 | - | -1 | 8834 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| LBX1 | - | - | 9134 | |
| FOXI2 | - | - | 9637 | |
| TDGF1P3 | - | - | 9765 | |
| FOXC2 | - | - | 10175 | |
| FOXA3 | - | - | 10333 | |
| SMO | 0.25 | 1 | 10504 | |
| SPRY1 | - | - | 10636 | |
| EPAS1 | - | - | 10869 | |
| ATOH1 | - | - | 11336 | |
| MYOG | - | - | 12349 | |
| SIX1 | - | -1 | 12393 | |
| IL7 | - | - | 12636 | |
| FGF2 | - | - | 13150 | |
| FOXC1 | - | -1 | 13793 | |
| MESP1 | - | - | 13805 | |
| NTF4 | 0.25 | 1 | 14749 | |
| EVX1 | - | - | 15344 | |
| FOXI3 | - | - | 15933 | |
| TBX19 | - | - | 17620 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| NOTCH4 | - | - | 19230 | |
| POU5F1 | - | - | 19704 | |
| FOXS1 | - | - | 20143 | |
| IFRD1 | - | - | 20716 | |
| TRIM15 | - | - | 21614 | |
| PITX1 | 0.25 | 1 | 21646 | |
| WNT4 | - | - | 21809 | |
| NOTCH3 | - | - | 22114 | |
| PPARG | - | -1 | 22729 | |
| PSEN2 | - | - | 23095 | |
| FZD5 | - | - | 23249 | |
| TGFB1I1 | - | - | 23709 | |
| FGFR4 | - | - | 23965 | |
| PML | - | - | 25277 | |
| TEAD4 | - | - | 25568 |
GO:0045165
| Name | Description | External IDs |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | Entrez:4916  Ensembl: ENSG00000140538  HPRD: 01870  HGNC: 8033  |
| GAP43 | growth associated protein 43 | Entrez:2596  Ensembl: ENSG00000172020  HPRD: 01198  HGNC: 4140  |
| ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | Entrez:2066  HGNC: 3432  HPRD: 02767  Ensembl: ENSG00000178568  |
| NEUROD1 | neuronal differentiation 1 | Entrez:4760  HPRD: 03428  HGNC: 7762  Ensembl: ENSG00000162992  |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657  HGNC: 11195  HPRD: 08921  Ensembl: ENSG00000181449  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | ||||
| GAP43 | growth associated protein 43 | ||||
| ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | ||||
| NEUROD1 | neuronal differentiation 1 | ||||
| SOX2 | SRY (sex determining region Y)-box 2 |
| Query gene | Gene | Gene description | Edge score |
| NTRK3 | NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | |
| GAP43 | GAP43 | growth associated protein 43 | |
| ERBB4 | ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | |
| NEUROD1 | NEUROD1 | neuronal differentiation 1 | |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 |