| Gene | Input weight | Standard | Rank | |
| ATP2B2 | 0.5 | 1 | 3 | |
| GNAO1 | - | - | 4 | |
| NIPBL | - | -1 | 7 | |
| BPTF | - | - | 8 | |
| AFF2 | 0.25 | 1 | 21 | |
| SHANK2 | 1.0 | 1 | 28 | |
| ATRX | - | -1 | 36 | |
| LPHN1 | - | - | 44 | |
| PLCB1 | - | -1 | 48 | |
| SLIT1 | - | - | 61 | |
| GRIN2A | 0.25 | 1 | 66 | |
| PAFAH1B1 | 0.25 | 1 | 74 | |
| ERBB4 | 0.25 | 1 | 86 | |
| NEUROD2 | - | - | 98 | |
| CREB1 | - | - | 100 | |
| CNTNAP2 | 1.0 | 1 | 115 | |
| SLC1A2 | - | - | 119 | |
| NFIB | - | - | 120 | |
| NEUROD1 | - | -1 | 127 | |
| SYNJ1 | - | - | 156 | |
| ABR | - | - | 160 | |
| GABRA5 | 0.25 | 1 | 161 | |
| GNAQ | - | - | 189 | |
| SOX2 | - | -1 | 200 | |
| FGFR2 | - | -1 | 237 | |
| PLXNA2 | - | - | 243 | |
| SSTR2 | - | - | 251 | |
| IGF1R | - | - | 252 | |
| CACNA1A | - | -1 | 270 | |
| LRP6 | - | - | 279 | |
| BMPR2 | - | -1 | 281 | |
| RORB | - | - | 283 | |
| GRIN1 | - | - | 294 | |
| RARB | 0.25 | 1 | 300 | |
| SLC8A2 | - | - | 334 | |
| UBE3A | 0.25 | 1 | 365 | |
| MYH10 | - | - | 366 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| UNC5C | - | - | 390 | |
| NCOA2 | - | - | 407 | |
| ASCL1 | - | - | 413 | |
| GSK3B | - | - | 427 | |
| CA10 | - | - | 430 | |
| TBR1 | 1.0 | 1 | 447 | |
| NR3C1 | - | - | 496 | |
| SALL1 | - | - | 506 | |
| ATP6V0D1 | - | - | 539 | |
| NNAT | - | - | 543 | |
| PAX6 | 0.25 | 1 | 544 | |
| NEUROD6 | - | - | 556 | |
| VLDLR | 0.25 | 1 | 574 | |
| CDK5R1 | - | - | 586 | |
| NPY | 0.25 | 1 | 592 | |
| TOP2B | - | - | 615 | |
| RELN | 1.0 | 1 | 626 | |
| PAX2 | - | - | 653 | |
| LHX2 | - | - | 655 | |
| SLIT2 | - | - | 659 | |
| FOXG1 | - | - | 661 | |
| CNTN2 | - | - | 674 | |
| FABP7 | 0.25 | 1 | 678 | |
| MYO16 | 0.25 | 1 | 691 | |
| NCOA6 | - | - | 700 | |
| PGAP1 | - | - | 711 | |
| POU3F2 | - | - | 750 | |
| DICER1 | - | -1 | 762 | |
| GRIN2B | 1.0 | 1 | 763 | |
| TSC1 | 0.25 | 1 | 790 | |
| SMARCA4 | - | - | 801 | |
| HPRT1 | - | -1 | 842 | |
| PCSK1 | - | - | 898 | |
| DRD1 | 0.25 | 1 | 899 | |
| FYN | - | - | 932 | |
| SHROOM2 | - | - | 937 | |
| ZIC1 | - | - | 939 | |
| CHRD | - | - | 941 | |
| CTNNA2 | - | - | 954 | |
| NR4A3 | - | -1 | 963 | |
| PTCH1 | - | -1 | 972 | |
| NR2E1 | 0.25 | 1 | 977 | |
| LRP2 | 0.25 | 1 | 984 | |
| NR4A2 | 0.25 | 1 | 992 | |
| YWHAE | - | - | 995 | |
| PROX1 | - | - | 997 | |
| ULK1 | - | - | 1008 | |
| ID4 | - | - | 1009 | |
| NCOR1 | - | - | 1019 | |
| SYNJ2 | - | - | 1031 | |
| MED1 | - | - | 1034 | |
| KCNK3 | - | - | 1065 | |
| NDEL1 | 0.25 | 1 | 1074 | |
| NKX2-2 | - | - | 1120 | |
| BCL11B | - | - | 1125 | |
| BMPR1A | - | - | 1140 | |
| RFX4 | - | - | 1148 | |
| ROBO2 | - | -1 | 1202 | |
| DLC1 | - | - | 1282 | |
| IRS2 | - | -1 | 1300 | |
| BAG6 | - | - | 1305 | |
| FZD7 | - | - | 1357 | |
| FEZF2 | 0.25 | 1 | 1366 | |
| HDAC2 | - | - | 1440 | |
| MAP1S | - | - | 1467 | |
| SALL3 | - | - | 1487 | |
| LEF1 | - | - | 1499 | |
| APP | - | - | 1515 | |
| WNT10B | - | - | 1517 | |
| SMARCA1 | - | - | 1522 | |
| SLC8A1 | - | - | 1529 | |
| GDF10 | - | - | 1535 | |
| PRKG1 | - | - | 1553 | |
| ZIC2 | - | -1 | 1609 | |
| RAC1 | - | - | 1617 | |
| SEPT4 | - | - | 1625 | |
| WNT2B | - | - | 1673 | |
| NR2F1 | - | - | 1728 | |
| AKAP5 | - | - | 1759 | |
| BCR | - | -1 | 1839 | |
| BCAN | - | - | 1869 | |
| SMAD1 | - | - | 1872 | |
| ZEB1 | - | -1 | 1901 | |
| OTX2 | - | -1 | 1916 | |
| PHOX2B | - | - | 1917 | |
| AGTR2 | 0.25 | 1 | 1955 | |
| ISL1 | - | - | 1974 | |
| EN2 | 0.25 | 1 | 1984 | |
| PCSK1N | - | - | 2078 | |
| TYRO3 | - | - | 2083 | |
| PHF8 | 0.25 | 1 | 2109 | |
| ID2 | - | - | 2154 | |
| ROBO1 | - | - | 2182 | |
| FZD4 | - | -1 | 2229 | |
| FGFR1 | - | - | 2262 | |
| MAPK8IP3 | - | - | 2274 | |
| NR0B1 | - | -1 | 2278 | |
| SOX3 | - | - | 2303 | |
| DLX2 | 0.25 | 1 | 2357 | |
| POU6F1 | - | - | 2358 | |
| DLX1 | 0.25 | 1 | 2400 | |
| MTPN | - | - | 2402 | |
| NLGN4X | 1.0 | 1 | 2439 | |
| SBK1 | - | - | 2478 | |
| ATP7A | - | -1 | 2483 | |
| BCL2 | 0.25 | 1 | 2485 | |
| CNTN4 | 1.0 | 1 | 2492 | |
| SIX3 | - | -1 | 2494 | |
| EGFR | - | -1 | 2546 | |
| LHX1 | - | - | 2560 | |
| DSCAML1 | - | - | 2579 | |
| HTR5A | 0.25 | 1 | 2606 | |
| EMX1 | - | - | 2613 | |
| FGFR3 | - | -1 | 2640 | |
| FOXA2 | - | - | 2645 | |
| PITPNM1 | - | - | 2649 | |
| GPR56 | - | - | 2667 | |
| DPYSL2 | - | - | 2672 | |
| MDGA1 | - | - | 2704 | |
| LRP8 | - | - | 2732 | |
| RTN4 | - | - | 2735 | |
| TULP3 | - | - | 2770 | |
| SRC | - | - | 2825 | |
| PTPRS | - | - | 2838 | |
| NOTCH1 | - | -1 | 2865 | |
| SKI | - | - | 2904 | |
| FZD8 | - | - | 2933 | |
| NR2F2 | - | - | 2941 | |
| FZD10 | - | - | 2957 | |
| NEUROG2 | - | - | 2989 | |
| C2CD3 | - | - | 2994 | |
| PCDH18 | - | - | 3050 | |
| CITED1 | - | - | 3064 | |
| HOOK3 | - | - | 3126 | |
| MSX1 | - | -1 | 3127 | |
| KNDC1 | - | - | 3146 | |
| NODAL | - | -1 | 3149 | |
| GSX1 | - | - | 3159 | |
| FZD3 | - | - | 3193 | |
| CDK5 | 0.25 | 1 | 3194 | |
| NTF3 | 0.25 | 1 | 3232 | |
| LHX6 | - | - | 3241 | |
| RORA | - | - | 3270 | |
| GATA2 | - | -1 | 3291 | |
| BMI1 | - | - | 3300 | |
| WNT5A | - | - | 3319 | |
| WNT8B | - | - | 3407 | |
| CDON | - | - | 3487 | |
| HCN2 | - | - | 3542 | |
| NUMBL | - | - | 3618 | |
| ATM | - | -1 | 3622 | |
| SMAD9 | - | -1 | 3672 | |
| OGDH | - | - | 3680 | |
| SERPINE2 | - | - | 3708 | |
| DIXDC1 | - | - | 3734 | |
| DRD2 | 0.25 | 1 | 3749 | |
| ALDH1A2 | - | - | 3771 | |
| HAP1 | - | - | 3800 | |
| AVPR1A | 0.5 | 1 | 3803 | |
| CYP19A1 | 0.25 | 1 | 3823 | |
| TNR | - | - | 3868 | |
| LHX8 | - | - | 3904 | |
| SLC6A11 | - | - | 3917 | |
| CYP17A1 | 0.25 | 1 | 3984 | |
| LHX5 | - | - | 3998 | |
| CTTNBP2 | 0.5 | 1 | 4123 | |
| SLC8A3 | - | - | 4131 | |
| SLC6A4 | 0.25 | 1 | 4137 | |
| NKX2-1 | - | - | 4142 | |
| FOXP2 | 0.5 | 1 | 4163 | |
| LMX1A | - | - | 4236 | |
| GHRHR | - | - | 4237 | |
| MAS1 | - | - | 4244 | |
| HOXA2 | - | - | 4273 | |
| P2RY1 | - | - | 4342 | |
| WNT1 | - | - | 4383 | |
| AGTPBP1 | - | - | 4391 | |
| AXIN1 | - | -1 | 4419 | |
| GBX2 | - | - | 4440 | |
| RAX | - | -1 | 4486 | |
| FGF10 | - | -1 | 4532 | |
| ALX1 | - | - | 4544 | |
| LMX1B | 0.5 | 1 | 4551 | |
| JHDM1D | - | - | 4566 | |
| OTX1 | - | - | 4602 | |
| WNT3 | - | - | 4613 | |
| INPPL1 | - | - | 4681 | |
| DRAXIN | - | - | 4717 | |
| WNT3A | - | - | 4747 | |
| EXT1 | 0.25 | 1 | 4780 | |
| BMP2 | - | -1 | 4855 | |
| MEN1 | - | -1 | 4917 | |
| HES5 | - | - | 4919 | |
| TH | 0.25 | 1 | 4933 | |
| SRD5A1 | 0.25 | 1 | 4966 | |
| MECOM | - | - | 4979 | |
| ACSL3 | - | - | 4998 | |
| CBS | 0.25 | 1 | 5018 | |
| EN1 | - | - | 5021 | |
| NDST1 | - | - | 5114 | |
| SPHK2 | - | - | 5120 | |
| SFRP2 | - | - | 5252 | |
| FOXB1 | - | - | 5360 | |
| RYK | - | - | 5383 | |
| PLXNA4 | - | - | 5391 | |
| NOG | - | -1 | 5439 | |
| PHOX2A | - | - | 5462 | |
| OTP | - | - | 5490 | |
| EFNA5 | - | - | 5525 | |
| BARHL1 | - | - | 5649 | |
| PTF1A | - | - | 5721 | |
| OXCT1 | - | - | 5813 | |
| CST3 | - | -1 | 5894 | |
| HES1 | 0.25 | 1 | 5912 | |
| ETS1 | - | - | 5943 | |
| FZD9 | - | - | 6246 | |
| EGR2 | 0.25 | 1 | 6247 | |
| GLI3 | - | -1 | 6261 | |
| FOXL1 | - | - | 6313 | |
| ZEB2 | - | - | 6361 | |
| OXTR | 0.5 | 1 | 6388 | |
| UQCRQ | - | - | 6404 | |
| HMX2 | - | - | 6428 | |
| HMX3 | - | - | 6472 | |
| BMP4 | - | -1 | 6499 | |
| TSPAN2 | - | - | 6543 | |
| DVL2 | - | - | 6546 | |
| PCM1 | - | -1 | 6569 | |
| CKB | - | - | 6665 | |
| GDF7 | - | - | 6682 | |
| SDF4 | - | - | 6703 | |
| GAS1 | - | - | 6937 | |
| AVPR2 | - | -1 | 7031 | |
| WNT7B | - | - | 7113 | |
| CX3CR1 | - | - | 7136 | |
| PEX5 | - | -1 | 7148 | |
| SHROOM4 | - | - | 7165 | |
| FRS2 | - | - | 7173 | |
| KLHL17 | - | - | 7239 | |
| PRTFDC1 | - | - | 7244 | |
| GLI2 | - | -1 | 7307 | |
| SFRP4 | - | - | 7310 | |
| WNT7A | - | - | 7312 | |
| VAX1 | - | - | 7419 | |
| HES3 | - | - | 7466 | |
| GHRH | - | - | 7478 | |
| SLC6A3 | 0.5 | 1 | 7659 | |
| HMGCS1 | - | - | 7719 | |
| CXCL12 | - | - | 7802 | |
| WNT8A | - | - | 7814 | |
| NUMB | - | - | 7848 | |
| MET | 1.0 | 1 | 8002 | |
| CYP11A1 | 0.25 | 1 | 8063 | |
| FRZB | - | - | 8105 | |
| KDM2B | - | - | 8359 | |
| ARF4 | - | - | 8507 | |
| GSX2 | - | - | 8581 | |
| TAL2 | - | - | 8785 | |
| LRRK2 | - | -1 | 8802 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| DMBX1 | - | - | 9113 | |
| CASP2 | - | - | 9480 | |
| RAB3GAP1 | - | - | 9492 | |
| UTP3 | - | - | 9543 | |
| BOK | - | - | 9611 | |
| SLC7A11 | - | - | 9692 | |
| GSC | - | - | 9702 | |
| HNF1B | - | -1 | 9881 | |
| HSD17B3 | 0.25 | 1 | 9988 | |
| BBS4 | - | -1 | 10131 | |
| GNG12 | - | - | 10259 | |
| FOXA3 | - | - | 10333 | |
| ECE2 | - | - | 10348 | |
| TGFBR2 | - | -1 | 10407 | |
| SMO | 0.25 | 1 | 10504 | |
| LDB1 | - | - | 10693 | |
| MAFB | - | - | 10783 | |
| PYGO2 | - | - | 11014 | |
| CEP290 | - | -1 | 11184 | |
| SFRP5 | - | - | 11273 | |
| ATOH1 | - | - | 11336 | |
| AHSG | - | - | 11515 | |
| DKK1 | - | - | 11567 | |
| CEP120 | - | - | 11598 | |
| DUOX2 | - | -1 | 11733 | |
| CCKAR | - | - | 11747 | |
| NKX2-6 | - | -1 | 11887 | |
| HMGCS2 | - | - | 12061 | |
| KDM1A | - | - | 12183 | |
| FOXP3 | - | -1 | 12457 | |
| IFT88 | - | - | 12504 | |
| EOMES | - | - | 12952 | |
| FGF2 | - | - | 13150 | |
| HOXB1 | 0.25 | 1 | 13245 | |
| FOXB2 | - | - | 13267 | |
| SLC23A1 | - | - | 13509 | |
| FOXC1 | - | -1 | 13793 | |
| PPT1 | - | -1 | 13834 | |
| COX1 | - | - | 14254 | |
| NES | - | - | 14479 | |
| MKKS | - | -1 | 14510 | |
| PHGDH | - | -1 | 14598 | |
| VCX3A | - | - | 15342 | |
| PEBP1 | - | - | 15772 | |
| FEZF1 | 0.25 | 1 | 16009 | |
| EFNA2 | - | - | 16629 | |
| FZD2 | - | - | 16930 | |
| TBX19 | - | - | 17620 | |
| SSTR3 | - | - | 18309 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| TP73 | - | - | 18810 | |
| HSPA5 | - | - | 19143 | |
| PITX3 | 0.25 | 1 | 19326 | |
| ND4 | - | - | 19910 | |
| FZD6 | - | - | 19921 | |
| CHRNB2 | 0.25 | 1 | 20216 | |
| HOXB2 | - | - | 20538 | |
| COX17 | - | - | 20673 | |
| HESX1 | - | - | 20692 | |
| FZD1 | - | - | 20775 | |
| SRR | - | - | 20837 | |
| LUZP6 | - | - | 20893 | |
| BAK1 | - | - | 21229 | |
| KAT2A | - | - | 21262 | |
| CDK5RAP2 | - | -1 | 21330 | |
| RPGRIP1L | - | - | 21472 | |
| HNMT | - | - | 21489 | |
| MNAT1 | - | - | 21615 | |
| PITX1 | 0.25 | 1 | 21646 | |
| TACC3 | - | - | 21671 | |
| ALDH1A3 | - | - | 21739 | |
| PAFAH1B2 | - | - | 21761 | |
| C1QB | - | - | 21780 | |
| WNT4 | - | - | 21809 | |
| ARX | 0.25 | 1 | 21856 | |
| BBS2 | - | -1 | 21914 | |
| NOTCH3 | - | - | 22114 | |
| AQP1 | - | - | 22433 | |
| BID | - | - | 22640 | |
| SHARPIN | - | - | 22710 | |
| MDK | - | - | 22733 | |
| UCHL5 | - | - | 22745 | |
| NDUFS4 | - | -1 | 22766 | |
| AARS | - | - | 22782 | |
| AGER | - | - | 22895 | |
| CD9 | - | - | 22906 | |
| ANXA3 | - | - | 22980 | |
| E2F1 | - | - | 23057 | |
| PSEN2 | - | - | 23095 | |
| FZD5 | - | - | 23249 | |
| BDH1 | - | - | 23265 | |
| BAG3 | - | - | 23315 | |
| CCNG1 | - | - | 23565 | |
| CDH1 | - | -1 | 23589 | |
| WDR62 | - | - | 23710 | |
| ATG7 | - | - | 23978 | |
| SPHK1 | - | - | 24069 | |
| EPOR | - | - | 24273 | |
| CDK5RAP3 | - | - | 24423 | |
| PEX13 | - | -1 | 24461 | |
| AXL | - | - | 24522 | |
| BRCA1 | - | -1 | 24573 | |
| CTNS | - | -1 | 24644 | |
| CDK5RAP1 | - | - | 24649 | |
| HTRA2 | - | -1 | 24821 | |
| TWSG1 | - | - | 24840 | |
| ASPM | - | -1 | 24942 | |
| NAGLU | - | -1 | 25261 | |
| GNPAT | - | -1 | 25382 | |
| ACAT1 | - | -1 | 25641 | |
| CLN5 | - | -1 | 25742 |
GO:0007420
| Name | Description | External IDs |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | Entrez:491  HGNC: 815  Ensembl: ENSG00000157087  HPRD: 00160  |
| GNAO1 | guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O | Entrez:2775  HPRD: 00757  HGNC: 4389  Ensembl: ENSG00000087258  |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836  HPRD: 10560  HGNC: 28862  Ensembl: ENSG00000164190  |
| BPTF | bromodomain PHD finger transcription factor | Entrez:2186  HGNC: 3581  Ensembl: ENSG00000171634  HPRD: 03490  |
| AFF2 | AF4/FMR2 family, member 2 | Entrez:2334  HGNC: 3776  HPRD: 02397  Ensembl: ENSG00000155966  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | ||||
| GNAO1 | guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O | ||||
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| BPTF | bromodomain PHD finger transcription factor | ||||
| AFF2 | AF4/FMR2 family, member 2 |
| Query gene | Gene | Gene description | Edge score |
| ATP2B2 | ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | |
| GNAO1 | GNAO1 | guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O | |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| BPTF | BPTF | bromodomain PHD finger transcription factor | |
| AFF2 | AFF2 | AF4/FMR2 family, member 2 |