| Gene | Input weight | Standard | Rank | |
| FGFR2 | - | -1 | 237 | |
| RARB | 0.25 | 1 | 300 | |
| CALB1 | 0.25 | 1 | 484 | |
| PBX1 | - | - | 489 | |
| SALL1 | - | - | 506 | |
| RET | - | -1 | 524 | |
| PAX2 | - | - | 653 | |
| SLIT2 | - | - | 659 | |
| BDNF | 0.25 | 1 | 791 | |
| SMAD3 | - | - | 823 | |
| PTCH1 | - | -1 | 972 | |
| BMP7 | - | - | 1137 | |
| SMAD7 | - | - | 1192 | |
| ROBO2 | - | -1 | 1202 | |
| FGFR1 | - | - | 2262 | |
| SMAD6 | - | - | 2305 | |
| GATA3 | - | - | 2376 | |
| LHX1 | - | - | 2560 | |
| SMAD2 | - | - | 2694 | |
| FOXD3 | - | - | 3025 | |
| CITED1 | - | - | 3064 | |
| BMPER | - | - | 3497 | |
| SIM1 | - | -1 | 3528 | |
| SMAD9 | - | -1 | 3672 | |
| RARA | 0.25 | 1 | 3695 | |
| DLG1 | - | - | 3822 | |
| TSHZ3 | - | - | 3848 | |
| GDF11 | - | - | 4104 | |
| WNT1 | - | - | 4383 | |
| HOXA11 | - | - | 4432 | |
| WT1 | - | -1 | 4514 | |
| GDNF | - | -1 | 4658 | |
| KIF26B | - | - | 4895 | |
| HOXD11 | 0.25 | 1 | 5105 | |
| WNT6 | - | - | 5106 | |
| NOG | - | -1 | 5439 | |
| TCF21 | - | - | 5633 | |
| CTNNBIP1 | - | - | 5675 | |
| OSR1 | - | - | 5691 | |
| PGF | - | - | 6172 | |
| FOXD2 | - | - | 6176 | |
| NPNT | - | - | 6188 | |
| GLI3 | - | -1 | 6261 | |
| BMP4 | - | -1 | 6499 | |
| PAX8 | - | -1 | 6637 | |
| GZF1 | - | - | 7072 | |
| CRLF1 | - | - | 7152 | |
| LAMA5 | - | - | 7171 | |
| ILK | - | - | 7305 | |
| WNT11 | - | - | 7820 | |
| FOXD4L1 | - | - | 7836 | |
| FOXD1 | - | - | 7884 | |
| PSPN | - | - | 8112 | |
| WNT9B | - | - | 8217 | |
| ARG2 | - | - | 8780 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| FOXD4L4 | - | - | 9599 | |
| HNF1B | - | -1 | 9881 | |
| FOXC2 | - | - | 10175 | |
| SPRY1 | - | - | 10636 | |
| HS2ST1 | - | - | 11391 | |
| EPCAM | - | -1 | 11411 | |
| FOXD4 | - | - | 11635 | |
| SIX1 | - | -1 | 12393 | |
| FGF2 | - | - | 13150 | |
| AGT | - | -1 | 13305 | |
| FOXC1 | - | -1 | 13793 | |
| FOXD4L5 | - | - | 13951 | |
| FOXD4L2 | - | - | 16505 | |
| SHH | - | -1 | 18571 | |
| FOXD4L6 | - | - | 19555 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| CD44 | - | - | 20701 | |
| WNT4 | - | - | 21809 | |
| MYC | - | -1 | 22615 | |
| SDC1 | - | - | 22626 | |
| SDC4 | - | - | 23067 |
GO:0001657
| Name | Description | External IDs |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| RARB | retinoic acid receptor, beta | Entrez:5915 HPRD: 07183 Ensembl: ENSG00000077092 HGNC: 9865 |
| CALB1 | calbindin 1, 28kDa | Entrez:793 Ensembl: ENSG00000104327 HGNC: 1434 HPRD: 00229 |
| PBX1 | pre-B-cell leukemia homeobox 1 | Entrez:5087 Ensembl: ENSG00000185630 HGNC: 8632 HPRD: 08889 |
| SALL1 | sal-like 1 (Drosophila) | Entrez:6299 HGNC: 10524 Ensembl: ENSG00000103449 HPRD: 03742 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| RARB | retinoic acid receptor, beta | ||||
| CALB1 | calbindin 1, 28kDa | ||||
| PBX1 | pre-B-cell leukemia homeobox 1 | ||||
| SALL1 | sal-like 1 (Drosophila) |
| Query gene | Gene | Gene description | Edge score |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| RARB | RARB | retinoic acid receptor, beta | |
| CALB1 | CALB1 | calbindin 1, 28kDa | |
| PBX1 | PBX1 | pre-B-cell leukemia homeobox 1 | |
| SALL1 | SALL1 | sal-like 1 (Drosophila) |