| Gene | Input weight | Standard | Rank | |
| SATB2 | 0.25 | 1 | 149 | |
| FGFR2 | - | -1 | 237 | |
| LRP6 | - | - | 279 | |
| PGAP1 | - | - | 711 | |
| SMAD4 | - | - | 821 | |
| SMAD3 | - | - | 823 | |
| PTCH1 | - | -1 | 972 | |
| SMAD5 | - | - | 1002 | |
| PCSK6 | - | - | 1035 | |
| BMP7 | - | - | 1137 | |
| MEOX2 | - | - | 1224 | |
| CXXC4 | - | - | 1490 | |
| SMAD1 | - | - | 1872 | |
| DLL1 | - | - | 2053 | |
| SMAD6 | - | - | 2305 | |
| EPB41L5 | - | - | 2335 | |
| LHX1 | - | - | 2560 | |
| SMAD2 | - | - | 2694 | |
| SIM2 | - | - | 2910 | |
| TBX3 | - | - | 2958 | |
| C2CD3 | - | - | 2994 | |
| CITED1 | - | - | 3064 | |
| NODAL | - | -1 | 3149 | |
| T | - | - | 3286 | |
| WNT5A | - | - | 3319 | |
| WNT1 | - | - | 4383 | |
| FGF10 | - | -1 | 4532 | |
| HOXB6 | - | - | 4560 | |
| WNT3 | - | - | 4613 | |
| WNT3A | - | - | 4747 | |
| TDGF1 | - | - | 6132 | |
| EFNB1 | - | -1 | 6517 | |
| IHH | - | -1 | 7160 | |
| FRS2 | - | - | 7173 | |
| WNT7A | - | - | 7312 | |
| HOXD8 | - | - | 7316 | |
| TDRD5 | - | - | 7375 | |
| RIPPLY2 | - | - | 7657 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| RIPPLY1 | - | - | 9472 | |
| GDF3 | - | -1 | 10819 | |
| TCF7L1 | - | - | 12273 | |
| OOEP | - | - | 13495 | |
| NOTO | - | - | 14785 | |
| MEOX1 | - | - | 20002 | |
| RPGRIP1L | - | - | 21472 | |
| PLD6 | - | - | 21953 | |
| DISP1 | - | - | 22983 | |
| FZD5 | - | - | 23249 |
GO:0009880
| Name | Description | External IDs |
| SATB2 | SATB homeobox 2 | Entrez:23314  Ensembl: ENSG00000119042  HPRD: 12178  HGNC: 21637  |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040  Ensembl: ENSG00000070018  HGNC: 6698  HPRD: 04617  |
| PGAP1 | post-GPI attachment to proteins 1 | Entrez:80055  HGNC: 25712  HPRD: 10147  |
| SMAD4 | SMAD family member 4 | Entrez:4089  Ensembl: ENSG00000141646  HGNC: 6770  HPRD: 02995  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SATB2 | SATB homeobox 2 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| PGAP1 | post-GPI attachment to proteins 1 | ||||
| SMAD4 | SMAD family member 4 |
| Query gene | Gene | Gene description | Edge score |
| SATB2 | SATB2 | SATB homeobox 2 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| PGAP1 | PGAP1 | post-GPI attachment to proteins 1 | |
| SMAD4 | SMAD4 | SMAD family member 4 |