| Gene | Input weight | Standard | Rank | |
| NIPBL | - | -1 | 7 | |
| GNAQ | - | - | 189 | |
| FGF9 | - | - | 262 | |
| LRP6 | - | - | 279 | |
| RARB | 0.25 | 1 | 300 | |
| CHD7 | - | -1 | 416 | |
| PBX1 | - | - | 489 | |
| SALL1 | - | - | 506 | |
| MYCN | - | - | 560 | |
| DICER1 | - | -1 | 762 | |
| SMARCA4 | - | - | 801 | |
| MBNL1 | - | - | 956 | |
| PTCH1 | - | -1 | 972 | |
| MED1 | - | - | 1034 | |
| BMP7 | - | - | 1137 | |
| BMPR1A | - | - | 1140 | |
| HDAC2 | - | - | 1440 | |
| LEF1 | - | - | 1499 | |
| LRP4 | - | - | 1500 | |
| CYP26B1 | - | - | 1734 | |
| GNAS | - | -1 | 1842 | |
| PRRX1 | - | - | 2125 | |
| MSX2 | - | -1 | 2260 | |
| FGFR1 | - | - | 2262 | |
| DLX5 | - | - | 2706 | |
| SHOX2 | - | - | 2767 | |
| TULP3 | - | - | 2770 | |
| TBX5 | - | - | 2836 | |
| HOXD9 | - | - | 2856 | |
| NOTCH1 | - | -1 | 2865 | |
| SKI | - | - | 2904 | |
| TFAP2A | - | -1 | 2923 | |
| TBX3 | - | - | 2958 | |
| C2CD3 | - | - | 2994 | |
| MSX1 | - | -1 | 3127 | |
| DLX6 | 0.25 | 1 | 3129 | |
| WNT5A | - | - | 3319 | |
| SP8 | - | - | 3706 | |
| ALDH1A2 | - | - | 3771 | |
| HOXA13 | - | - | 4036 | |
| PBX2 | - | - | 4205 | |
| ALX3 | - | - | 4288 | |
| HOXA11 | - | - | 4432 | |
| ALX1 | - | - | 4544 | |
| WNT3 | - | - | 4613 | |
| RSPO2 | - | - | 4631 | |
| GDF5 | - | -1 | 4882 | |
| FGF4 | - | - | 4938 | |
| MECOM | - | - | 4979 | |
| HOXD13 | 0.25 | 1 | 4997 | |
| EN1 | - | - | 5021 | |
| HOXD11 | 0.25 | 1 | 5105 | |
| SFRP2 | - | - | 5252 | |
| NOG | - | -1 | 5439 | |
| ZNF358 | - | - | 5591 | |
| OSR1 | - | - | 5691 | |
| ALX4 | - | - | 5932 | |
| GLI3 | - | -1 | 6261 | |
| BMP4 | - | -1 | 6499 | |
| GAS1 | - | - | 6937 | |
| TWIST1 | - | -1 | 6980 | |
| WNT7A | - | - | 7312 | |
| MMP13 | - | -1 | 7779 | |
| TBX4 | - | - | 8189 | |
| GPC3 | - | -1 | 8430 | |
| RARG | 0.25 | 1 | 8575 | |
| CHST11 | - | - | 9003 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| GJA5 | - | - | 9156 | |
| RDH10 | - | - | 9300 | |
| LRP5 | - | -1 | 9420 | |
| ACD | - | - | 9679 | |
| SALL4 | - | - | 9929 | |
| MUSTN1 | - | - | 11301 | |
| LMBR1 | - | -1 | 11626 | |
| IFT88 | - | - | 12504 | |
| HDAC1 | - | - | 12825 | |
| WNT9A | - | - | 13365 | |
| SP9 | - | - | 13625 | |
| GNA12 | - | - | 14481 | |
| IFT52 | - | - | 16599 | |
| FBXW4 | - | - | 18142 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| ECE1 | - | -1 | 20540 | |
| RAB23 | - | - | 20831 | |
| OSR2 | - | - | 20931 | |
| KIAA1715 | - | - | 21073 | |
| RPGRIP1L | - | - | 21472 | |
| PITX1 | 0.25 | 1 | 21646 | |
| TP63 | - | -1 | 22528 | |
| CRABP2 | - | - | 22763 | |
| PSEN2 | - | - | 23095 | |
| PRRX2 | - | - | 23936 | |
| FLVCR1 | - | - | 24042 | |
| IMPAD1 | - | - | 24504 |
GO:0035113
| Name | Description | External IDs |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836 HPRD: 10560 HGNC: 28862 Ensembl: ENSG00000164190 |
| GNAQ | guanine nucleotide binding protein (G protein), q polypeptide | Entrez:2776 HGNC: 4390 HPRD: 02998 |
| FGF9 | fibroblast growth factor 9 | Entrez:2254 HPRD: 02951 HGNC: 3687 Ensembl: ENSG00000102678 |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040 Ensembl: ENSG00000070018 HGNC: 6698 HPRD: 04617 |
| RARB | retinoic acid receptor, beta | Entrez:5915 HPRD: 07183 Ensembl: ENSG00000077092 HGNC: 9865 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| GNAQ | guanine nucleotide binding protein (G protein), q polypeptide | ||||
| FGF9 | fibroblast growth factor 9 | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| RARB | retinoic acid receptor, beta |
| Query gene | Gene | Gene description | Edge score |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| GNAQ | GNAQ | guanine nucleotide binding protein (G protein), q polypeptide | |
| FGF9 | FGF9 | fibroblast growth factor 9 | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| RARB | RARB | retinoic acid receptor, beta |