| Gene | Input weight | Standard | Rank | |
| ATP2B2 | 0.5 | 1 | 3 | |
| NIPBL | - | -1 | 7 | |
| ABR | - | - | 160 | |
| FGFR2 | - | -1 | 237 | |
| FGF9 | - | - | 262 | |
| CHD7 | - | -1 | 416 | |
| SALL1 | - | - | 506 | |
| PAX2 | - | - | 653 | |
| FOXG1 | - | - | 661 | |
| ZIC1 | - | - | 939 | |
| NR4A3 | - | -1 | 963 | |
| SOX9 | - | -1 | 970 | |
| PROX1 | - | - | 997 | |
| SPRY2 | - | - | 1454 | |
| RAC1 | - | - | 1617 | |
| VANGL2 | - | - | 1793 | |
| BCR | - | -1 | 1839 | |
| DVL3 | - | - | 2090 | |
| PRRX1 | - | - | 2125 | |
| FGFR1 | - | - | 2262 | |
| MYO15A | - | -1 | 2469 | |
| INSIG1 | - | - | 2529 | |
| TSHZ1 | - | - | 2619 | |
| NKX3-2 | - | - | 2620 | |
| SOD1 | - | -1 | 2702 | |
| DLX5 | - | - | 2706 | |
| COL11A1 | 0.25 | 1 | 2725 | |
| TFAP2A | - | -1 | 2923 | |
| DLX6 | 0.25 | 1 | 3129 | |
| FZD3 | - | - | 3193 | |
| WNT5A | - | - | 3319 | |
| WNT8B | - | - | 3407 | |
| ITGA8 | - | - | 3626 | |
| SIX4 | - | - | 3738 | |
| OTOP1 | - | - | 3757 | |
| HOXA2 | - | - | 4273 | |
| WNT1 | - | - | 4383 | |
| GBX2 | - | - | 4440 | |
| FGF10 | - | -1 | 4532 | |
| OTX1 | - | - | 4602 | |
| WNT3 | - | - | 4613 | |
| NEUROG1 | 0.25 | 1 | 4644 | |
| FGF3 | - | - | 4687 | |
| WNT3A | - | - | 4747 | |
| COL2A1 | - | -1 | 4839 | |
| CLIC5 | - | - | 5291 | |
| NOG | - | -1 | 5439 | |
| TMIE | - | -1 | 5505 | |
| OSR1 | - | - | 5691 | |
| CELSR1 | - | - | 6180 | |
| SIX2 | - | - | 6306 | |
| HMX2 | - | - | 6428 | |
| HMX3 | - | - | 6472 | |
| FOXI1 | - | -1 | 6510 | |
| DVL2 | - | - | 6546 | |
| GAS1 | - | - | 6937 | |
| POU4F3 | - | -1 | 7242 | |
| GJB6 | - | -1 | 7314 | |
| GRHL3 | - | - | 7409 | |
| MYO7A | - | -1 | 8064 | |
| FRZB | - | - | 8105 | |
| EDN1 | - | - | 9540 | |
| FOXI2 | - | - | 9637 | |
| GSC | - | - | 9702 | |
| PRKRA | - | - | 9728 | |
| CHRNA10 | - | - | 10096 | |
| USH1G | - | -1 | 10139 | |
| INSIG2 | - | - | 10252 | |
| SMO | 0.25 | 1 | 10504 | |
| ATP6V1B1 | - | - | 10564 | |
| MAFB | - | - | 10783 | |
| CEP290 | - | -1 | 11184 | |
| ATOH1 | - | - | 11336 | |
| SIX1 | - | -1 | 12393 | |
| PTPRQ | - | -1 | 12427 | |
| KCNQ4 | - | -1 | 12849 | |
| PRKRAP1 | - | - | 13599 | |
| PTK7 | - | - | 13643 | |
| FOXI3 | - | - | 15933 | |
| FZD2 | - | - | 16930 | |
| DVL1P1 | - | - | 18731 | |
| DVL1 | - | - | 18924 | |
| FZD6 | - | - | 19921 | |
| HESX1 | - | - | 20692 | |
| OSR2 | - | - | 20931 | |
| TCAP | - | -1 | 22131 | |
| PRRX2 | - | - | 23936 | |
| NAGLU | - | -1 | 25261 |
GO:0042471
| Name | Description | External IDs |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | Entrez:491 HGNC: 815 Ensembl: ENSG00000157087 HPRD: 00160 |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836 HPRD: 10560 HGNC: 28862 Ensembl: ENSG00000164190 |
| ABR | active BCR-related | Entrez:29 HGNC: 81 HPRD: 02649 Ensembl: ENSG00000159842 |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| FGF9 | fibroblast growth factor 9 | Entrez:2254 HPRD: 02951 HGNC: 3687 Ensembl: ENSG00000102678 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | ||||
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| ABR | active BCR-related | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| FGF9 | fibroblast growth factor 9 |
| Query gene | Gene | Gene description | Edge score |
| ATP2B2 | ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| ABR | ABR | active BCR-related | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| FGF9 | FGF9 | fibroblast growth factor 9 |