| Gene | Input weight | Standard | Rank | |
| SATB2 | 0.25 | 1 | 149 | |
| SOX2 | - | -1 | 200 | |
| FGF9 | - | - | 262 | |
| GABBR1 | 0.25 | 1 | 264 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| MEF2C | 0.25 | 1 | 428 | |
| RUNX2 | - | -1 | 480 | |
| JUND | - | - | 509 | |
| HDAC4 | - | - | 696 | |
| SMAD3 | - | - | 823 | |
| LEF1 | - | - | 1499 | |
| JUNB | - | - | 1547 | |
| ESR1 | 0.25 | 1 | 1791 | |
| SMAD1 | - | - | 1872 | |
| PTHLH | - | -1 | 1993 | |
| ACHE | - | - | 2025 | |
| MSX2 | - | -1 | 2260 | |
| DLX5 | - | - | 2706 | |
| SHOX2 | - | - | 2767 | |
| MEF2A | - | - | 2837 | |
| IGFBP5 | - | - | 3306 | |
| AMELX | - | -1 | 3396 | |
| HOXA2 | - | - | 4273 | |
| BMP6 | - | - | 4358 | |
| SOX8 | - | - | 4609 | |
| WNT3 | - | - | 4613 | |
| RSPO2 | - | - | 4631 | |
| WNT3A | - | - | 4747 | |
| BMP2 | - | -1 | 4855 | |
| MEN1 | - | -1 | 4917 | |
| NOG | - | -1 | 5439 | |
| WWOX | - | -1 | 5791 | |
| GLI1 | - | - | 6241 | |
| BMP4 | - | -1 | 6499 | |
| CYP24A1 | - | - | 7000 | |
| SP7 | - | - | 7138 | |
| IHH | - | -1 | 7160 | |
| GLI2 | - | -1 | 7307 | |
| WNT11 | - | - | 7820 | |
| CLEC5A | - | - | 8599 | |
| SNAI1 | - | - | 9198 | |
| LRP5 | - | -1 | 9420 | |
| SMO | 0.25 | 1 | 10504 | |
| SPP1 | - | - | 12442 | |
| GDF2 | - | - | 14603 | |
| SHH | - | -1 | 18571 | |
| FZD1 | - | - | 20775 | |
| BGLAP | - | - | 20875 | |
| IGF2 | 0.25 | 1 | 22401 | |
| CYR61 | - | - | 22574 | |
| FIGNL1 | 0.25 | 1 | 23587 | |
| SNAI2 | - | -1 | 23962 | |
| IL18 | - | - | 24018 | |
| COL1A1 | - | -1 | 24140 | |
| WWTR1 | - | - | 24317 |
GO:0001649
| Name | Description | External IDs |
| SATB2 | SATB homeobox 2 | Entrez:23314 Ensembl: ENSG00000119042 HPRD: 12178 HGNC: 21637 |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657 HGNC: 11195 HPRD: 08921 Ensembl: ENSG00000181449 |
| FGF9 | fibroblast growth factor 9 | Entrez:2254 HPRD: 02951 HGNC: 3687 Ensembl: ENSG00000102678 |
| GABBR1 | gamma-aminobutyric acid (GABA) B receptor, 1 | Entrez:2550 HGNC: 4070 Ensembl: ENSG00000204681 HPRD: 04644 |
| NF1 | neurofibromin 1 | Entrez:4763 HGNC: 7765 HPRD: 01203 Ensembl: ENSG00000196712 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SATB2 | SATB homeobox 2 | ||||
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| FGF9 | fibroblast growth factor 9 | ||||
| GABBR1 | gamma-aminobutyric acid (GABA) B receptor, 1 | ||||
| NF1 | neurofibromin 1 |
| Query gene | Gene | Gene description | Edge score |
| SATB2 | SATB2 | SATB homeobox 2 | |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| FGF9 | FGF9 | fibroblast growth factor 9 | |
| GABBR1 | GABBR1 | gamma-aminobutyric acid (GABA) B receptor, 1 | |
| NF1 | NF1 | neurofibromin 1 |