| Gene | Input weight | Standard | Rank | |
| NRXN1 | 1.0 | 1 | 2 | |
| SEMA6D | - | - | 19 | |
| ANK2 | 1.0 | 1 | 22 | |
| SNAP25 | 0.25 | 1 | 26 | |
| NRXN3 | 0.5 | 1 | 41 | |
| CACNB2 | 0.5 | 1 | 46 | |
| DCX | 0.25 | 1 | 52 | |
| KRAS | - | -1 | 57 | |
| GAP43 | - | - | 60 | |
| SLIT1 | - | - | 61 | |
| NRCAM | 0.25 | 1 | 69 | |
| PAFAH1B1 | 0.25 | 1 | 74 | |
| KCNQ2 | - | -1 | 82 | |
| CREB1 | - | - | 100 | |
| MAP2 | - | - | 106 | |
| YWHAB | 0.25 | 1 | 107 | |
| EPHA4 | - | - | 110 | |
| TRIO | 0.5 | 1 | 111 | |
| NFASC | - | - | 113 | |
| CELSR3 | - | - | 118 | |
| NFIB | - | - | 120 | |
| NPTX1 | - | - | 144 | |
| KIF5C | - | - | 170 | |
| CRMP1 | - | - | 174 | |
| EPHB1 | - | - | 176 | |
| SCN3B | - | -1 | 177 | |
| NCAN | - | - | 206 | |
| AP2S1 | - | - | 210 | |
| SIAH1 | - | - | 223 | |
| SEMA6A | - | - | 235 | |
| FGFR2 | - | -1 | 237 | |
| MEG3 | - | - | 238 | |
| PLXNA2 | - | - | 243 | |
| IGF1R | - | - | 252 | |
| APC | 0.25 | 1 | 266 | |
| CACNB4 | - | - | 271 | |
| CACNB3 | - | - | 278 | |
| CACNA1D | 0.5 | 1 | 293 | |
| EFNB3 | - | - | 298 | |
| CNTN1 | - | - | 299 | |
| SEMA4F | - | - | 303 | |
| DLG3 | - | - | 344 | |
| SLITRK3 | - | - | 356 | |
| RPS6KA5 | - | - | 359 | |
| MYH10 | - | - | 366 | |
| CLASP2 | - | - | 375 | |
| UNC5C | - | - | 390 | |
| ARHGEF12 | - | -1 | 393 | |
| EPHB2 | - | - | 401 | |
| MAP1B | - | - | 403 | |
| L1CAM | - | - | 415 | |
| NREP | - | - | 417 | |
| GSK3B | - | - | 427 | |
| CACNA1G | 0.25 | 1 | 443 | |
| TBR1 | 1.0 | 1 | 447 | |
| SH3GL2 | - | - | 454 | |
| NCAM1 | - | - | 461 | |
| ADCY1 | 0.25 | 1 | 466 | |
| ULK2 | - | - | 471 | |
| POU4F1 | - | - | 475 | |
| NTNG1 | 0.25 | 1 | 505 | |
| JUN | - | - | 511 | |
| SLITRK5 | - | - | 522 | |
| USP33 | - | - | 542 | |
| PAX6 | 0.25 | 1 | 544 | |
| SNAP91 | - | - | 546 | |
| CDK5R1 | - | - | 586 | |
| TOP2B | - | - | 615 | |
| RELN | 1.0 | 1 | 626 | |
| SCN8A | - | - | 644 | |
| KLF7 | - | - | 649 | |
| PAX2 | - | - | 653 | |
| LHX2 | - | - | 655 | |
| SLIT2 | - | - | 659 | |
| FOXG1 | - | - | 661 | |
| CNTN2 | - | - | 674 | |
| UCHL1 | - | -1 | 675 | |
| RPS6KA2 | 0.25 | 1 | 689 | |
| ARHGEF11 | - | - | 705 | |
| RANBP9 | - | - | 724 | |
| HSP90AA1 | - | - | 727 | |
| TUBB3 | - | - | 729 | |
| RPS6KA3 | - | - | 758 | |
| STXBP1 | - | - | 769 | |
| AP2M1 | - | - | 779 | |
| BDNF | 0.25 | 1 | 791 | |
| CACNB1 | - | - | 800 | |
| PIP5K1C | - | - | 806 | |
| CACNA1C | - | -1 | 807 | |
| SOS1 | - | -1 | 810 | |
| CDH4 | - | - | 812 | |
| POU4F2 | - | - | 819 | |
| EPHA7 | - | - | 837 | |
| RAB3A | 0.25 | 1 | 848 | |
| DLG4 | - | - | 857 | |
| RPS6KA6 | - | - | 876 | |
| MAP2K1 | 0.25 | 1 | 907 | |
| ARHGAP35 | - | - | 908 | |
| LGI1 | - | - | 923 | |
| APBB2 | - | - | 930 | |
| FYN | - | - | 932 | |
| CTNNA2 | - | - | 954 | |
| CLASP1 | - | - | 955 | |
| NR4A3 | - | -1 | 963 | |
| NR2E1 | 0.25 | 1 | 977 | |
| NR4A2 | 0.25 | 1 | 992 | |
| ULK1 | - | - | 1008 | |
| SLIT3 | - | - | 1025 | |
| KCNQ3 | - | - | 1060 | |
| NDEL1 | 0.25 | 1 | 1074 | |
| DST | - | - | 1092 | |
| CHL1 | - | - | 1094 | |
| ROCK2 | - | - | 1113 | |
| COL9A1 | - | - | 1116 | |
| BCL11B | - | - | 1125 | |
| CSNK2B | - | - | 1126 | |
| MAPK1 | - | - | 1128 | |
| BMP7 | - | - | 1137 | |
| CDC42 | - | - | 1138 | |
| CNTNAP1 | - | - | 1147 | |
| SOS2 | - | - | 1181 | |
| TRPC3 | - | - | 1196 | |
| ROBO2 | - | -1 | 1202 | |
| SRGAP1 | - | - | 1215 | |
| DPYSL4 | - | - | 1222 | |
| MAP2K2 | 0.25 | 1 | 1240 | |
| SPTAN1 | - | -1 | 1287 | |
| COL4A3 | - | -1 | 1327 | |
| ENAH | - | - | 1348 | |
| ERBB3 | - | - | 1350 | |
| BAIAP2 | 0.25 | 1 | 1353 | |
| FZD7 | - | - | 1357 | |
| FEZF2 | 0.25 | 1 | 1366 | |
| SEMA5A | 0.5 | 1 | 1388 | |
| SLITRK1 | - | - | 1417 | |
| CLTA | - | - | 1495 | |
| BRSK2 | - | - | 1503 | |
| CAP2 | - | - | 1512 | |
| APP | - | - | 1515 | |
| ANK1 | - | - | 1555 | |
| ZIC2 | - | -1 | 1609 | |
| RAC1 | - | - | 1617 | |
| ST8SIA2 | 0.25 | 1 | 1618 | |
| KAL1 | - | - | 1627 | |
| COL9A2 | - | - | 1646 | |
| SPTBN4 | - | - | 1647 | |
| DCC | - | - | 1687 | |
| DPYSL5 | - | - | 1836 | |
| COL4A4 | - | -1 | 1838 | |
| PARD3 | - | - | 1845 | |
| DPYSL3 | - | - | 1875 | |
| CCK | 0.25 | 1 | 1899 | |
| CLTC | - | - | 1904 | |
| OTX2 | - | -1 | 1916 | |
| PITPNA | - | - | 1918 | |
| SPTBN2 | - | -1 | 1935 | |
| ISL1 | - | - | 1974 | |
| NEO1 | - | - | 2001 | |
| PLXNA1 | - | - | 2107 | |
| PTPRZ1 | 0.25 | 1 | 2144 | |
| ROBO1 | - | - | 2182 | |
| CNTN6 | - | - | 2198 | |
| MYO10 | - | - | 2214 | |
| WASL | - | - | 2257 | |
| FGFR1 | - | - | 2262 | |
| MAPK8IP3 | - | - | 2274 | |
| RHOA | - | - | 2292 | |
| EPHB3 | - | - | 2306 | |
| BMPR1B | - | -1 | 2316 | |
| AP2A2 | - | - | 2352 | |
| AGAP2 | - | - | 2378 | |
| PARD6B | - | - | 2392 | |
| ABL1 | - | - | 2404 | |
| ALCAM | - | - | 2432 | |
| PLXNC1 | - | - | 2433 | |
| PTK2 | 0.25 | 1 | 2488 | |
| CNTN4 | 1.0 | 1 | 2492 | |
| TRPC7 | - | - | 2516 | |
| CAP1 | - | - | 2541 | |
| EGFR | - | -1 | 2546 | |
| LHX1 | - | - | 2560 | |
| ATL1 | - | -1 | 2567 | |
| DSCAML1 | - | - | 2579 | |
| PICALM | - | -1 | 2597 | |
| NRP2 | 0.25 | 1 | 2603 | |
| SRGAP2 | - | - | 2605 | |
| FGFR3 | - | -1 | 2640 | |
| TRPC1 | - | - | 2648 | |
| DPYSL2 | - | - | 2672 | |
| DOCK1 | - | - | 2675 | |
| CACNA1I | - | - | 2676 | |
| RGMB | - | - | 2696 | |
| DLX5 | - | - | 2706 | |
| RTN4 | - | - | 2735 | |
| NRP1 | - | - | 2807 | |
| SRC | - | - | 2825 | |
| UNC5A | - | - | 2835 | |
| VAV2 | - | - | 2850 | |
| PLXNB1 | - | - | 2853 | |
| NOTCH1 | - | -1 | 2865 | |
| FZD8 | - | - | 2933 | |
| ABLIM1 | - | - | 2939 | |
| TRPC6 | 0.5 | 1 | 2954 | |
| GRB2 | - | - | 2962 | |
| GPC1 | - | - | 2969 | |
| NEUROG2 | - | - | 2989 | |
| FOXD3 | - | - | 3025 | |
| FEZ1 | - | - | 3035 | |
| NCK2 | - | - | 3077 | |
| APBB1 | - | - | 3094 | |
| EVL | - | - | 3103 | |
| RHOB | - | - | 3118 | |
| TRPC5 | - | - | 3138 | |
| GFRA1 | - | - | 3164 | |
| FZD3 | - | - | 3193 | |
| CDK5 | 0.25 | 1 | 3194 | |
| NTF3 | 0.25 | 1 | 3232 | |
| RAF1 | 0.25 | 1 | 3236 | |
| UNC5D | - | - | 3290 | |
| PTPRA | - | - | 3316 | |
| WNT5A | - | - | 3319 | |
| PLXNA3 | - | - | 3326 | |
| NDN | 0.25 | 1 | 3379 | |
| BAI1 | - | - | 3385 | |
| NTN4 | - | - | 3398 | |
| NTNG2 | - | - | 3474 | |
| SPTB | - | - | 3478 | |
| SEMA3A | - | - | 3494 | |
| VAX2 | - | - | 3553 | |
| NUMBL | - | - | 3618 | |
| SPTBN1 | - | - | 3627 | |
| SIAH2 | - | - | 3729 | |
| DRD2 | 0.25 | 1 | 3749 | |
| TNN | - | - | 3766 | |
| DLG1 | - | - | 3822 | |
| CACNA1H | 1.0 | 1 | 3855 | |
| TNR | - | - | 3868 | |
| ITGB1 | - | - | 3903 | |
| HSP90AB1 | - | - | 3924 | |
| PLXNB3 | - | - | 4003 | |
| TSPO | 0.25 | 1 | 4009 | |
| LAMA1 | - | - | 4021 | |
| WNT16 | - | - | 4117 | |
| NKX2-1 | - | - | 4142 | |
| CFL1 | - | - | 4162 | |
| S100B | - | - | 4199 | |
| LMX1A | - | - | 4236 | |
| LIMK1 | - | - | 4265 | |
| PAK2 | - | - | 4270 | |
| HOXA2 | - | - | 4273 | |
| ROCK1 | - | - | 4378 | |
| PVRL1 | - | - | 4430 | |
| GBX2 | - | - | 4440 | |
| SLITRK6 | - | - | 4542 | |
| LHX9 | - | - | 4572 | |
| WNT3 | - | - | 4613 | |
| GDNF | - | -1 | 4658 | |
| SEMA3E | - | - | 4698 | |
| DRAXIN | - | - | 4717 | |
| PLCG1 | - | - | 4744 | |
| WNT3A | - | - | 4747 | |
| RGMA | - | - | 4758 | |
| PTPRM | - | - | 4769 | |
| EXT1 | 0.25 | 1 | 4780 | |
| COL2A1 | - | -1 | 4839 | |
| AP2A1 | - | - | 4845 | |
| PAK1 | - | - | 4940 | |
| RTN4RL2 | - | - | 4963 | |
| HRAS | 0.25 | 1 | 5086 | |
| BRSK1 | - | - | 5103 | |
| SPTBN5 | - | - | 5319 | |
| FOXB1 | - | - | 5360 | |
| RYK | - | - | 5383 | |
| PLXNA4 | - | - | 5391 | |
| PRNP | - | -1 | 5418 | |
| NOG | - | -1 | 5439 | |
| RND1 | - | - | 5515 | |
| EFNA5 | - | - | 5525 | |
| COL4A5 | - | -1 | 5647 | |
| ABLIM3 | - | - | 5662 | |
| MNX1 | - | - | 5812 | |
| CSNK2A1 | - | - | 5948 | |
| COL6A5 | - | - | 5963 | |
| FARP2 | - | - | 5987 | |
| AGRN | 0.25 | 1 | 6010 | |
| NTN1 | - | - | 6023 | |
| FOXD2 | - | - | 6176 | |
| NGFR | 0.25 | 1 | 6212 | |
| EGR2 | 0.25 | 1 | 6247 | |
| GLI3 | - | -1 | 6261 | |
| RHOG | - | - | 6279 | |
| RTN4R | - | - | 6304 | |
| RUNX3 | - | - | 6322 | |
| ALS2 | - | -1 | 6326 | |
| CYFIP1 | - | - | 6339 | |
| MAPK3 | 0.25 | 1 | 6426 | |
| EFNB1 | - | -1 | 6517 | |
| ST8SIA4 | - | - | 6549 | |
| OPHN1 | 0.5 | 1 | 6584 | |
| RTN4RL1 | - | - | 6593 | |
| GDF7 | - | - | 6682 | |
| SCN1B | - | -1 | 6718 | |
| SEMA6C | - | - | 6810 | |
| AP2B1 | - | - | 6850 | |
| BOC | - | - | 6901 | |
| GAS1 | - | - | 6937 | |
| SPTA1 | - | -1 | 6958 | |
| COL6A6 | - | - | 7027 | |
| WNT7B | - | - | 7113 | |
| POU4F3 | - | -1 | 7242 | |
| GLI2 | - | -1 | 7307 | |
| VAX1 | - | - | 7419 | |
| LHX4 | - | - | 7529 | |
| ACTG1 | - | -1 | 7566 | |
| PTPN11 | - | -1 | 7735 | |
| FOXN4 | - | - | 7786 | |
| CXCL12 | - | - | 7802 | |
| FOXD4L1 | - | - | 7836 | |
| NUMB | - | - | 7848 | |
| VASP | - | - | 7880 | |
| FOXD1 | - | - | 7884 | |
| KIAA1598 | - | - | 7896 | |
| MET | 1.0 | 1 | 8002 | |
| ABL2 | - | - | 8082 | |
| CD24 | - | -1 | 8102 | |
| PSPN | - | - | 8112 | |
| TRPC4 | - | - | 8264 | |
| MYH9 | - | -1 | 8434 | |
| COL9A3 | - | - | 8628 | |
| ITGA9 | - | - | 8870 | |
| EZR | - | - | 8959 | |
| STMN1 | - | - | 9278 | |
| CTNNA1 | - | - | 9331 | |
| FOXD4L4 | - | - | 9599 | |
| ITGA2 | - | - | 10030 | |
| RPS6KA4 | - | - | 10148 | |
| ARHGAP39 | - | - | 10477 | |
| ABLIM2 | - | - | 10487 | |
| SMO | 0.25 | 1 | 10504 | |
| SEMA4A | - | -1 | 10527 | |
| TLN1 | - | - | 10904 | |
| ATOH1 | - | - | 11336 | |
| B3GNT2 | - | - | 11566 | |
| CACNA1F | 0.25 | 1 | 11612 | |
| FOXD4 | - | - | 11635 | |
| RHOC | - | - | 11655 | |
| CSNK2A2 | - | - | 11717 | |
| CCKAR | - | - | 11747 | |
| ITGB3 | 0.5 | 1 | 11817 | |
| NKX2-8 | - | - | 12202 | |
| RXRA | 0.25 | 1 | 12299 | |
| SEMA4D | - | - | 12699 | |
| HFE2 | - | -1 | 12783 | |
| DRGX | - | - | 12824 | |
| NCK1 | - | - | 12890 | |
| PLXND1 | - | - | 13635 | |
| SEMA7A | - | - | 13700 | |
| FOXD4L5 | - | - | 13951 | |
| NRAS | - | -1 | 14119 | |
| NRTN | - | - | 14223 | |
| PRKCQ | - | - | 15381 | |
| ITGA1 | - | - | 15500 | |
| UNC5B | - | - | 15551 | |
| KIF4B | - | - | 15720 | |
| VCAN | - | - | 15758 | |
| ACTB | - | - | 15887 | |
| FEZF1 | 0.25 | 1 | 16009 | |
| TREM2 | - | - | 16167 | |
| ROBO3 | 0.25 | 1 | 16413 | |
| FOXD4L2 | - | - | 16505 | |
| EFNA2 | - | - | 16629 | |
| FZD2 | - | - | 16930 | |
| STIP1 | - | - | 18295 | |
| SHH | - | -1 | 18571 | |
| DVL1P1 | - | - | 18731 | |
| DVL1 | - | - | 18924 | |
| FOXD4L6 | - | - | 19555 | |
| DOCK7 | - | - | 19597 | |
| FZD6 | - | - | 19921 | |
| SDCBP | - | - | 19967 | |
| PLA2G10 | - | - | 20040 | |
| COL5A2 | - | -1 | 20084 | |
| CACNA1S | - | -1 | 20128 | |
| CHRNB2 | 0.25 | 1 | 20216 | |
| AMIGO1 | - | - | 20613 | |
| CNP | - | - | 20759 | |
| FZD1 | - | - | 20775 | |
| CD72 | - | - | 20858 | |
| S100A6 | - | - | 21518 | |
| PTPRC | - | - | 21546 | |
| AFG3L2 | - | -1 | 21742 | |
| ITGA2B | - | -1 | 21808 | |
| FES | - | - | 21831 | |
| ARX | 0.25 | 1 | 21856 | |
| ITGA5 | - | - | 21866 | |
| B3GNT1 | - | - | 21885 | |
| FEZ2 | - | - | 21906 | |
| TYROBP | - | - | 21979 | |
| CHST3 | - | - | 22182 | |
| NTN3 | - | - | 22328 | |
| COL1A2 | - | -1 | 22629 | |
| TNC | - | - | 22676 | |
| SEMA3B | - | - | 22735 | |
| COL3A1 | - | -1 | 22855 | |
| MYL12B | - | - | 22856 | |
| SPON2 | - | - | 23129 | |
| ERBB2 | - | -1 | 23130 | |
| COL6A3 | - | -1 | 23170 | |
| RPS6KA1 | - | - | 23184 | |
| FZD5 | - | - | 23249 | |
| LAMC1 | - | - | 23363 | |
| MYH11 | - | -1 | 23442 | |
| ARTN | - | - | 23447 | |
| APOE | 0.25 | 1 | 23516 | |
| ATG7 | - | - | 23978 | |
| MYL6 | - | - | 24098 | |
| COL1A1 | - | -1 | 24140 | |
| SEMA3F | - | - | 24157 | |
| COL6A1 | - | -1 | 24402 | |
| MYH14 | - | -1 | 24407 | |
| LAMB1 | 0.5 | 1 | 24677 | |
| RAC2 | - | - | 24787 | |
| TBCE | - | - | 24892 | |
| CDK1 | - | - | 25053 | |
| RRAS | - | - | 25111 | |
| KIF4A | - | - | 25122 | |
| COL5A1 | - | -1 | 25296 | |
| ITGAV | - | - | 25460 | |
| COL4A1 | - | - | 25541 | |
| COL6A2 | - | -1 | 25671 | |
| LAMB2 | - | - | 25730 | |
| MYL9 | - | - | 25739 | |
| COL4A2 | - | - | 25800 |
GO:0007409
| Name | Description | External IDs |
| NRXN1 | neurexin 1 | Entrez:9378 HPRD: 11858 Ensembl: ENSG00000179915 HGNC: 8008 |
| SEMA6D | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | Entrez:80031 Ensembl: ENSG00000137872 HGNC: 16770 HPRD: 10221 |
| ANK2 | ankyrin 2, neuronal | Entrez:287 HGNC: 493 HPRD: 00110 Ensembl: ENSG00000145362 |
| SNAP25 | synaptosomal-associated protein, 25kDa | Entrez:6616 Ensembl: ENSG00000132639 HPRD: 02637 HGNC: 11132 |
| NRXN3 | neurexin 3 | Entrez:9369 HGNC: 8010 HPRD: 08989 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NRXN1 | neurexin 1 | ||||
| SEMA6D | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | ||||
| ANK2 | ankyrin 2, neuronal | ||||
| SNAP25 | synaptosomal-associated protein, 25kDa | ||||
| NRXN3 | neurexin 3 |
| Query gene | Gene | Gene description | Edge score |
| NRXN1 | NRXN1 | neurexin 1 | |
| SEMA6D | SEMA6D | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | |
| ANK2 | ANK2 | ankyrin 2, neuronal | |
| SNAP25 | SNAP25 | synaptosomal-associated protein, 25kDa | |
| NRXN3 | NRXN3 | neurexin 3 |