| Gene | Input weight | Standard | Rank | |
| CREB1 | - | - | 100 | |
| BMPR2 | - | -1 | 281 | |
| ACVR1B | - | - | 510 | |
| JUN | - | - | 511 | |
| UBE2D3 | - | - | 528 | |
| USP9X | - | - | 554 | |
| NLK | - | - | 712 | |
| ZFYVE9 | - | - | 795 | |
| SMAD4 | - | - | 821 | |
| SMAD3 | - | - | 823 | |
| TGFB2 | - | - | 834 | |
| PTPRK | - | - | 850 | |
| SMURF2 | - | - | 889 | |
| CHRD | - | - | 941 | |
| ACVR2A | - | - | 965 | |
| SMAD5 | - | - | 1002 | |
| HIPK2 | - | - | 1051 | |
| BMP7 | - | - | 1137 | |
| BMPR1A | - | - | 1140 | |
| SMAD7 | - | - | 1192 | |
| MAP3K7 | - | - | 1275 | |
| FKBP1A | - | - | 1284 | |
| LEF1 | - | - | 1499 | |
| GDF10 | - | - | 1535 | |
| ACVR2B | - | -1 | 1676 | |
| FOS | - | - | 1680 | |
| SMAD1 | - | - | 1872 | |
| MSX2 | - | -1 | 2260 | |
| GDF6 | - | -1 | 2291 | |
| SMAD6 | - | - | 2305 | |
| BMPR1B | - | -1 | 2316 | |
| CHRDL1 | - | - | 2383 | |
| LEFTY1 | - | - | 2443 | |
| GREM2 | - | - | 2664 | |
| SMAD2 | - | - | 2694 | |
| RGMB | - | - | 2696 | |
| INHBB | - | - | 2842 | |
| SKI | - | - | 2904 | |
| SMURF1 | - | - | 3060 | |
| EGR1 | - | - | 3062 | |
| CITED1 | - | - | 3064 | |
| MSX1 | - | -1 | 3127 | |
| NODAL | - | -1 | 3149 | |
| T | - | - | 3286 | |
| MAP3K1 | - | -1 | 3381 | |
| KLF10 | - | - | 3457 | |
| SPTBN1 | - | - | 3627 | |
| SMAD9 | - | -1 | 3672 | |
| PDGFA | - | - | 3731 | |
| STUB1 | - | - | 4250 | |
| MSTN | - | - | 4329 | |
| BMP6 | - | - | 4358 | |
| WNT1 | - | - | 4383 | |
| FURIN | - | - | 4605 | |
| TGFBRAP1 | - | - | 4795 | |
| BMP2 | - | -1 | 4855 | |
| GDF5 | - | -1 | 4882 | |
| BMP10 | - | - | 5102 | |
| NOG | - | -1 | 5439 | |
| ZFYVE16 | - | - | 5592 | |
| WFIKKN2 | - | - | 5598 | |
| PPM1L | - | - | 5788 | |
| ACVR1 | - | -1 | 6054 | |
| GDF9 | - | - | 6335 | |
| BMP4 | - | -1 | 6499 | |
| USP9Y | - | -1 | 6508 | |
| AKAP3 | - | - | 6566 | |
| TGFBR3 | - | - | 6672 | |
| GDF7 | - | - | 6682 | |
| CER1 | - | - | 6956 | |
| TAB1 | - | - | 7218 | |
| TGFBR1 | - | -1 | 7268 | |
| LEFTY2 | - | - | 7335 | |
| AKAP4 | - | - | 8051 | |
| AMHR2 | - | - | 8485 | |
| ID1 | - | - | 9040 | |
| TGFBR2 | - | -1 | 10407 | |
| ARRB2 | - | - | 10647 | |
| FOXH1 | - | - | 10963 | |
| AFP | - | - | 11538 | |
| ACVRL1 | - | -1 | 11656 | |
| GATA4 | - | -1 | 12466 | |
| FSHB | 0.25 | 1 | 12923 | |
| TGFB3 | - | -1 | 13097 | |
| FSTL1 | - | - | 14291 | |
| GDF2 | - | - | 14603 | |
| FST | - | - | 14783 | |
| FNTA | - | - | 14922 | |
| POU5F1 | - | - | 19704 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| GDF15 | - | - | 20185 | |
| PDGFB | - | - | 21071 | |
| EID2 | - | - | 21599 | |
| IRAK1 | - | - | 21640 | |
| HPGD | - | -1 | 22284 | |
| ECSIT | - | - | 22627 | |
| COL1A2 | - | -1 | 22629 | |
| COL3A1 | - | -1 | 22855 | |
| HNF4A | - | -1 | 22965 | |
| FMOD | - | - | 23581 | |
| TGFB1I1 | - | - | 23709 | |
| ENG | - | -1 | 24746 | |
| DUSP22 | - | - | 24825 | |
| UBE2D1 | - | - | 24988 | |
| ADAM9 | - | -1 | 25221 | |
| PML | - | - | 25277 | |
| LTBP2 | - | -1 | 25618 |
GO:0007178
| Name | Description | External IDs |
| CREB1 | cAMP responsive element binding protein 1 | Entrez:1385  HGNC: 2345  HPRD: 00442  Ensembl: ENSG00000118260  |
| BMPR2 | bone morphogenetic protein receptor, type II (serine/threonine kinase) | Entrez:659  Ensembl: ENSG00000204217  HPRD: 02880  HGNC: 1078  |
| ACVR1B | activin A receptor, type IB | Entrez:91  Ensembl: ENSG00000135503  HGNC: 172  HPRD: 03193  |
| JUN | jun proto-oncogene | Entrez:3725  HGNC: 6204  HPRD: 01302  Ensembl: ENSG00000177606  |
| UBE2D3 | ubiquitin-conjugating enzyme E2D 3 | Entrez:7323  Ensembl: ENSG00000109332  HPRD: 04269  HGNC: 12476  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| CREB1 | cAMP responsive element binding protein 1 | ||||
| BMPR2 | bone morphogenetic protein receptor, type II (serine/threonine kinase) | ||||
| ACVR1B | activin A receptor, type IB | ||||
| JUN | jun proto-oncogene | ||||
| UBE2D3 | ubiquitin-conjugating enzyme E2D 3 |
| Query gene | Gene | Gene description | Edge score |
| CREB1 | CREB1 | cAMP responsive element binding protein 1 | |
| BMPR2 | BMPR2 | bone morphogenetic protein receptor, type II (serine/threonine kinase) | |
| ACVR1B | ACVR1B | activin A receptor, type IB | |
| JUN | JUN | jun proto-oncogene | |
| UBE2D3 | UBE2D3 | ubiquitin-conjugating enzyme E2D 3 |