| Gene | Input weight | Standard | Rank | |
| NIPBL | - | -1 | 7 | |
| SOX11 | - | - | 96 | |
| NELL1 | - | - | 132 | |
| APC | 0.25 | 1 | 266 | |
| LRP6 | - | - | 279 | |
| BMPR2 | - | -1 | 281 | |
| SFRP1 | - | - | 387 | |
| RUNX2 | - | -1 | 480 | |
| PBX1 | - | - | 489 | |
| JUND | - | - | 509 | |
| HDAC4 | - | - | 696 | |
| SMAD3 | - | - | 823 | |
| TGFB2 | - | - | 834 | |
| TOB2 | - | - | 880 | |
| CHRD | - | - | 941 | |
| ACVR2A | - | - | 965 | |
| SOX9 | - | -1 | 970 | |
| ID4 | - | - | 1009 | |
| CALCA | - | - | 1013 | |
| BMP7 | - | - | 1137 | |
| BMPR1A | - | - | 1140 | |
| WNT10B | - | - | 1517 | |
| GDF10 | - | - | 1535 | |
| ACVR2B | - | -1 | 1676 | |
| CDK6 | - | - | 1795 | |
| GNAS | - | -1 | 1842 | |
| SMAD1 | - | - | 1872 | |
| FBN2 | - | - | 2131 | |
| ID2 | - | - | 2154 | |
| FGFR1 | - | - | 2262 | |
| BCOR | - | -1 | 2290 | |
| BMPR1B | - | -1 | 2316 | |
| GFRA4 | - | - | 2425 | |
| DLX5 | - | - | 2706 | |
| IGF1 | 0.25 | 1 | 2793 | |
| NOTCH1 | - | -1 | 2865 | |
| SKI | - | - | 2904 | |
| TFAP2A | - | -1 | 2923 | |
| PRL | 0.25 | 1 | 2977 | |
| SMURF1 | - | - | 3060 | |
| PTK2B | - | - | 3063 | |
| CITED1 | - | - | 3064 | |
| WNT5A | - | - | 3319 | |
| ANKH | - | - | 3475 | |
| IL6ST | - | - | 3678 | |
| FGF23 | - | -1 | 3888 | |
| KL | - | - | 3938 | |
| PIAS2 | - | - | 3977 | |
| SMOC1 | - | - | 4061 | |
| ZBTB16 | - | - | 4249 | |
| AXIN2 | - | -1 | 4260 | |
| BMP6 | - | - | 4358 | |
| STATH | - | - | 4554 | |
| BMP2 | - | -1 | 4855 | |
| MEN1 | - | -1 | 4917 | |
| SFRP2 | - | - | 5252 | |
| NOG | - | -1 | 5439 | |
| CTNNBIP1 | - | - | 5675 | |
| OSR1 | - | - | 5691 | |
| ACVR1 | - | -1 | 6054 | |
| ENPP1 | - | -1 | 6091 | |
| EGR2 | 0.25 | 1 | 6247 | |
| GLI3 | - | -1 | 6261 | |
| BMP4 | - | -1 | 6499 | |
| CSF1 | - | - | 6542 | |
| SOST | - | - | 6885 | |
| TWIST1 | - | -1 | 6980 | |
| WNT7B | - | - | 7113 | |
| ILK | - | - | 7305 | |
| P2RX7 | - | - | 7888 | |
| ID1 | - | - | 9040 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| NPPC | - | - | 9349 | |
| LRP5 | - | -1 | 9420 | |
| HEMGN | - | - | 9566 | |
| PKDCC | - | - | 9871 | |
| OSTN | - | - | 10888 | |
| OXT | 0.25 | 1 | 11176 | |
| AHSG | - | - | 11515 | |
| PDLIM7 | - | - | 12078 | |
| DDR2 | - | - | 12143 | |
| IL6 | - | -1 | 12695 | |
| TGFB3 | - | -1 | 13097 | |
| FGF2 | - | - | 13150 | |
| UCMA | - | - | 13359 | |
| CD276 | - | - | 13688 | |
| BMP2K | - | - | 14273 | |
| IFITM5 | - | - | 14395 | |
| HDAC7 | - | - | 14702 | |
| PTGER4 | - | - | 15180 | |
| TWIST2 | - | - | 15321 | |
| PPARGC1B | - | -1 | 15356 | |
| PHOSPHO1 | - | - | 15802 | |
| IL6R | - | - | 19897 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| RSAD2 | - | - | 20664 | |
| FZD1 | - | - | 20775 | |
| BGLAP | - | - | 20875 | |
| OSR2 | - | - | 20931 | |
| ESRRA | - | - | 21277 | |
| SRGN | - | - | 21336 | |
| CYP27B1 | - | - | 21369 | |
| WNT4 | - | - | 21809 | |
| NBR1 | - | - | 22425 | |
| CYR61 | - | - | 22574 | |
| ID3 | - | - | 22679 | |
| PLA2G4A | - | - | 22727 | |
| C14orf169 | - | - | 23070 | |
| ADRB2 | 0.25 | 1 | 23251 | |
| MGP | - | - | 23957 | |
| SNAI2 | - | -1 | 23962 | |
| P2RY2 | - | - | 24088 | |
| ECM1 | - | -1 | 24768 | |
| TWSG1 | - | - | 24840 |
GO:0030278
| Name | Description | External IDs |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836  HPRD: 10560  HGNC: 28862  Ensembl: ENSG00000164190  |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| NELL1 | NEL-like 1 (chicken) | Entrez:4745  Ensembl: ENSG00000165973  HPRD: 09081  HGNC: 7750  |
| APC | adenomatous polyposis coli | Entrez:324  HGNC: 583  HPRD: 01439  Ensembl: ENSG00000134982  |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040  Ensembl: ENSG00000070018  HGNC: 6698  HPRD: 04617  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| NELL1 | NEL-like 1 (chicken) | ||||
| APC | adenomatous polyposis coli | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 |
| Query gene | Gene | Gene description | Edge score |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| NELL1 | NELL1 | NEL-like 1 (chicken) | |
| APC | APC | adenomatous polyposis coli | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 |