| Gene | Input weight | Standard | Rank | |
| ATXN1 | - | -1 | 5 | |
| ZNF148 | - | - | 30 | |
| BCL11A | 1.0 | 1 | 32 | |
| NRIP1 | - | - | 72 | |
| SOX11 | - | - | 96 | |
| CREB1 | - | - | 100 | |
| NFIB | - | - | 120 | |
| NEUROD1 | - | -1 | 127 | |
| SATB2 | 0.25 | 1 | 149 | |
| NFAT5 | - | - | 153 | |
| CREBBP | - | -1 | 163 | |
| ZNF292 | - | - | 184 | |
| NPAS2 | 0.25 | 1 | 190 | |
| NCOA3 | - | - | 192 | |
| SOX2 | - | -1 | 200 | |
| KLF12 | - | - | 224 | |
| FGFR2 | - | -1 | 237 | |
| PPP3CA | - | - | 244 | |
| SOX4 | - | - | 250 | |
| LRP6 | - | - | 279 | |
| GRIN1 | - | - | 294 | |
| RARB | 0.25 | 1 | 300 | |
| EP300 | - | -1 | 318 | |
| TCF4 | - | - | 337 | |
| RPS6KA5 | - | - | 359 | |
| UBE3A | 0.25 | 1 | 365 | |
| NCOA2 | - | - | 407 | |
| ASCL1 | - | - | 413 | |
| MEF2C | 0.25 | 1 | 428 | |
| TBR1 | 1.0 | 1 | 447 | |
| POU4F1 | - | - | 475 | |
| RUNX2 | - | -1 | 480 | |
| PBX1 | - | - | 489 | |
| MED13 | - | - | 503 | |
| SALL1 | - | - | 506 | |
| ACVR1B | - | - | 510 | |
| JUN | - | - | 511 | |
| SMARCA2 | - | - | 521 | |
| PAX6 | 0.25 | 1 | 544 | |
| PFN1 | - | - | 548 | |
| TBL1XR1 | 0.25 | 1 | 581 | |
| ARNT2 | 0.25 | 1 | 601 | |
| PAX2 | - | - | 653 | |
| LHX2 | - | - | 655 | |
| FOXG1 | - | - | 661 | |
| HDAC4 | - | - | 696 | |
| NCOA6 | - | - | 700 | |
| POU3F2 | - | - | 750 | |
| ZIC3 | - | -1 | 789 | |
| CNOT7 | - | - | 799 | |
| SMARCA4 | - | - | 801 | |
| POU4F2 | - | - | 819 | |
| SMAD4 | - | - | 821 | |
| SMAD3 | - | - | 823 | |
| CSRNP3 | 0.25 | 1 | 824 | |
| MAML1 | - | - | 852 | |
| ZMIZ1 | - | - | 861 | |
| ZFPM2 | - | -1 | 867 | |
| THRB | - | -1 | 881 | |
| HNRNPK | - | - | 885 | |
| MEF2D | - | - | 887 | |
| SOX9 | - | -1 | 970 | |
| RNF4 | - | - | 973 | |
| NR4A2 | 0.25 | 1 | 992 | |
| PROX1 | - | - | 997 | |
| AKT1 | 0.25 | 1 | 1020 | |
| MED1 | - | - | 1034 | |
| MEIS2 | - | - | 1041 | |
| TEAD1 | - | - | 1052 | |
| FOXO3 | - | - | 1056 | |
| HIF1A | - | - | 1075 | |
| KLF6 | - | -1 | 1076 | |
| NKX2-2 | - | - | 1120 | |
| BCL11B | - | - | 1125 | |
| CLOCK | 0.25 | 1 | 1134 | |
| RELA | - | - | 1142 | |
| RFX4 | - | - | 1148 | |
| CSRNP2 | - | - | 1154 | |
| COPS5 | - | - | 1158 | |
| RLF | - | - | 1164 | |
| HIF3A | - | - | 1185 | |
| PAX3 | - | -1 | 1187 | |
| TBL1X | 0.25 | 1 | 1228 | |
| LMO4 | - | - | 1244 | |
| HDAC2 | - | - | 1440 | |
| RUNX1 | - | -1 | 1449 | |
| NFIA | - | - | 1486 | |
| CHD8 | 1.0 | 1 | 1493 | |
| LEF1 | - | - | 1499 | |
| APP | - | - | 1515 | |
| WNT10B | - | - | 1517 | |
| SOX10 | - | -1 | 1520 | |
| RFX3 | - | - | 1523 | |
| JUNB | - | - | 1547 | |
| NFIX | - | - | 1575 | |
| NR5A2 | - | - | 1591 | |
| RBPJ | - | - | 1595 | |
| MLLT10 | - | -1 | 1604 | |
| SMARCC1 | - | - | 1678 | |
| FOS | - | - | 1680 | |
| STRN3 | - | - | 1685 | |
| ONECUT2 | - | - | 1700 | |
| MKL1 | - | - | 1703 | |
| RBMX | - | - | 1730 | |
| SUPT5H | - | - | 1754 | |
| FOXF2 | - | - | 1787 | |
| NR2C2 | - | - | 1790 | |
| PSIP1 | - | - | 1794 | |
| SMAD1 | - | - | 1872 | |
| FGF1 | - | - | 1892 | |
| ZEB1 | - | -1 | 1901 | |
| AR | 0.25 | 1 | 1902 | |
| PPARGC1A | - | - | 1909 | |
| OTX2 | - | -1 | 1916 | |
| PHOX2B | - | - | 1917 | |
| ETS2 | - | - | 1941 | |
| HDAC5 | - | - | 1950 | |
| ISL1 | - | - | 1974 | |
| EN2 | 0.25 | 1 | 1984 | |
| FOXA1 | - | - | 1990 | |
| ELK1 | - | - | 2032 | |
| SOX12 | - | - | 2041 | |
| MED12 | 0.25 | 1 | 2052 | |
| ELF1 | - | - | 2054 | |
| GABPB2 | - | - | 2130 | |
| ZBTB38 | - | - | 2216 | |
| PRKD2 | - | - | 2228 | |
| WNT2 | 0.25 | 1 | 2299 | |
| MYB | - | - | 2304 | |
| SREBF2 | - | - | 2312 | |
| DLX2 | 0.25 | 1 | 2357 | |
| NPAS4 | - | - | 2371 | |
| GATA3 | - | - | 2376 | |
| HMGB1 | 0.25 | 1 | 2379 | |
| SIX3 | - | -1 | 2494 | |
| ZNF462 | - | - | 2501 | |
| IL17A | - | - | 2504 | |
| EPC1 | - | - | 2533 | |
| TAL1 | - | - | 2544 | |
| TCEA1 | - | - | 2583 | |
| STAT5B | - | - | 2593 | |
| CAMTA2 | - | - | 2626 | |
| FOXA2 | - | - | 2645 | |
| CITED2 | - | - | 2650 | |
| SCAP | - | - | 2683 | |
| PLAGL2 | - | - | 2692 | |
| SMAD2 | - | - | 2694 | |
| BCL9L | - | - | 2729 | |
| SHOX2 | - | - | 2767 | |
| IGF1 | 0.25 | 1 | 2793 | |
| NFATC3 | - | - | 2813 | |
| CNBP | - | -1 | 2828 | |
| TBX5 | - | - | 2836 | |
| MEF2A | - | - | 2837 | |
| SRF | - | - | 2841 | |
| PRPF6 | - | - | 2849 | |
| HOXD9 | - | - | 2856 | |
| NOTCH1 | - | -1 | 2865 | |
| SKI | - | - | 2904 | |
| TFAP2A | - | -1 | 2923 | |
| ABLIM1 | - | - | 2939 | |
| NEUROG2 | - | - | 2989 | |
| MYOD1 | - | - | 3005 | |
| FOXD3 | - | - | 3025 | |
| EGR1 | - | - | 3062 | |
| CDK7 | - | - | 3072 | |
| NR1H4 | - | - | 3080 | |
| TFAP2B | - | - | 3088 | |
| MSX1 | - | -1 | 3127 | |
| GSX1 | - | - | 3159 | |
| CRTC1 | - | - | 3204 | |
| SUPT4H1 | - | - | 3219 | |
| NTF3 | 0.25 | 1 | 3232 | |
| RORA | - | - | 3270 | |
| T | - | - | 3286 | |
| GATA2 | - | -1 | 3291 | |
| WNT5A | - | - | 3319 | |
| HMGB2 | - | - | 3362 | |
| HOXA7 | - | - | 3411 | |
| TEF | - | - | 3418 | |
| DAB2IP | - | - | 3482 | |
| CDON | - | - | 3487 | |
| ARNTL | - | - | 3493 | |
| MED21 | - | - | 3533 | |
| TCF7L2 | 0.5 | 1 | 3548 | |
| HAND1 | - | - | 3590 | |
| CEBPB | - | - | 3598 | |
| KLF4 | - | - | 3609 | |
| TP53BP1 | - | - | 3617 | |
| FOXE3 | - | -1 | 3688 | |
| RARA | 0.25 | 1 | 3695 | |
| SIX4 | - | - | 3738 | |
| DRD2 | 0.25 | 1 | 3749 | |
| MED17 | - | - | 3797 | |
| NRL | - | -1 | 3810 | |
| USF2 | - | - | 3869 | |
| FOXE1 | - | -1 | 3900 | |
| AKT2 | - | -1 | 3912 | |
| FOXO1 | 0.25 | 1 | 3947 | |
| MAPK14 | - | - | 3975 | |
| HSF4 | - | - | 3988 | |
| MTF1 | 0.25 | 1 | 4011 | |
| HOXA13 | - | - | 4036 | |
| NANOG | - | - | 4083 | |
| VEGFA | 0.25 | 1 | 4087 | |
| LPIN1 | - | - | 4092 | |
| NKX2-1 | - | - | 4142 | |
| PPARA | - | - | 4177 | |
| SP1 | - | - | 4195 | |
| PBX2 | - | - | 4205 | |
| RBM15 | - | - | 4247 | |
| HOXA2 | - | - | 4273 | |
| CAPRIN2 | - | - | 4284 | |
| S1PR1 | - | - | 4301 | |
| DRD3 | 0.25 | 1 | 4349 | |
| BMP6 | - | - | 4358 | |
| MYF6 | - | - | 4400 | |
| ESRRB | 0.25 | 1 | 4453 | |
| TFE3 | - | - | 4492 | |
| TFAP2C | - | - | 4511 | |
| WT1 | - | -1 | 4514 | |
| ZMIZ2 | - | - | 4528 | |
| HOXD10 | - | - | 4534 | |
| ALX1 | - | - | 4544 | |
| LMX1B | 0.5 | 1 | 4551 | |
| SOX8 | - | - | 4609 | |
| NEUROG1 | 0.25 | 1 | 4644 | |
| GDNF | - | -1 | 4658 | |
| MAML2 | - | - | 4659 | |
| NKX6-1 | - | - | 4665 | |
| WNT3A | - | - | 4747 | |
| NFYA | - | - | 4772 | |
| NKX3-1 | - | - | 4793 | |
| BMP2 | - | -1 | 4855 | |
| MEN1 | - | -1 | 4917 | |
| CCNH | - | - | 4961 | |
| MECOM | - | - | 4979 | |
| HOXD13 | 0.25 | 1 | 4997 | |
| EN1 | - | - | 5021 | |
| GLIS2 | - | -1 | 5061 | |
| MED14 | - | - | 5092 | |
| HOXA5 | - | - | 5132 | |
| MKL2 | 0.25 | 1 | 5140 | |
| IFNB1 | - | - | 5250 | |
| SFRP2 | - | - | 5252 | |
| PHOX2A | - | - | 5462 | |
| BMP3 | - | - | 5467 | |
| NFKBIA | - | - | 5569 | |
| KLF15 | - | - | 5586 | |
| HAND2 | - | - | 5589 | |
| ABLIM3 | - | - | 5662 | |
| OSR1 | - | - | 5691 | |
| GTF2A2 | - | - | 5744 | |
| FOXQ1 | - | - | 5820 | |
| MYOCD | - | - | 5907 | |
| HES1 | 0.25 | 1 | 5912 | |
| ALX4 | - | - | 5932 | |
| ETS1 | - | - | 5943 | |
| AGRN | 0.25 | 1 | 6010 | |
| GLIS1 | - | - | 6043 | |
| PLA2G1B | - | - | 6059 | |
| BHLHE23 | - | - | 6162 | |
| FOXD2 | - | - | 6176 | |
| NR1H2 | - | - | 6183 | |
| GLI1 | - | - | 6241 | |
| EGR2 | 0.25 | 1 | 6247 | |
| GLI3 | - | -1 | 6261 | |
| VSX2 | - | -1 | 6270 | |
| SIX2 | - | - | 6306 | |
| MITF | - | -1 | 6345 | |
| TFAP4 | - | - | 6377 | |
| MYO6 | - | -1 | 6390 | |
| VGLL2 | - | - | 6394 | |
| TCF3 | - | - | 6420 | |
| MAPK3 | 0.25 | 1 | 6426 | |
| BMP4 | - | -1 | 6499 | |
| FOXI1 | - | -1 | 6510 | |
| PAX8 | - | -1 | 6637 | |
| MAML3 | - | - | 6646 | |
| PKNOX1 | - | - | 6662 | |
| SOX15 | - | - | 6674 | |
| CDX1 | - | - | 6685 | |
| KMT2D | - | - | 6700 | |
| IL4 | - | - | 6852 | |
| CIITA | - | -1 | 6875 | |
| PRDM9 | - | - | 6886 | |
| GLIS3 | - | - | 6916 | |
| NKX2-3 | - | - | 6924 | |
| PTH | - | - | 6947 | |
| TWIST1 | - | -1 | 6980 | |
| ERCC3 | - | -1 | 7110 | |
| IHH | - | -1 | 7160 | |
| LMO1 | - | - | 7228 | |
| MURC | - | - | 7286 | |
| GLI2 | - | -1 | 7307 | |
| WNT7A | - | - | 7312 | |
| NR5A1 | - | -1 | 7328 | |
| GTF2H1 | - | - | 7370 | |
| GRHL3 | - | - | 7409 | |
| HES3 | - | - | 7466 | |
| FOXL2 | - | -1 | 7521 | |
| FOSL1 | - | - | 7629 | |
| IL11 | - | - | 7718 | |
| ABRA | - | - | 7831 | |
| FOXD4L1 | - | - | 7836 | |
| IL2 | - | - | 7838 | |
| TLX1 | - | - | 7842 | |
| ONECUT1 | - | - | 7872 | |
| MYF5 | - | - | 7875 | |
| FOXD1 | - | - | 7884 | |
| PDX1 | - | -1 | 7958 | |
| ELF4 | - | - | 7975 | |
| BCL3 | - | - | 7998 | |
| MC1R | - | -1 | 7999 | |
| MTA2 | - | - | 8271 | |
| NFATC2 | - | - | 8295 | |
| ATF4 | - | - | 8314 | |
| BARX2 | - | - | 8393 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| STAT3 | - | -1 | 8538 | |
| RARG | 0.25 | 1 | 8575 | |
| MED6 | - | - | 8655 | |
| NOBOX | - | -1 | 8694 | |
| TBX20 | - | -1 | 8764 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| GATA5 | - | - | 9103 | |
| POU2F3 | - | - | 9183 | |
| FOXO4 | - | - | 9362 | |
| LRP5 | - | -1 | 9420 | |
| FOXD4L4 | - | - | 9599 | |
| CRX | - | -1 | 9828 | |
| HNF1B | - | -1 | 9881 | |
| GLP1R | - | - | 9893 | |
| BHLHA15 | - | - | 9905 | |
| SALL4 | - | - | 9929 | |
| RPS6KA4 | - | - | 10148 | |
| FOXC2 | - | - | 10175 | |
| FOXA3 | - | - | 10333 | |
| NEUROG3 | - | - | 10352 | |
| ABLIM2 | - | - | 10487 | |
| LPIN2 | - | - | 10521 | |
| TAF9 | - | - | 10627 | |
| TBK1 | - | - | 10660 | |
| LDB1 | - | - | 10693 | |
| TAF1 | - | - | 10729 | |
| MAFB | - | - | 10783 | |
| GATA6 | - | -1 | 10828 | |
| EPAS1 | - | - | 10869 | |
| TFAP2E | - | - | 10883 | |
| FOXH1 | - | - | 10963 | |
| TRAF6 | - | - | 11055 | |
| CSRNP1 | - | - | 11067 | |
| MLXIPL | - | - | 11075 | |
| TFEB | - | - | 11138 | |
| ATOH1 | - | - | 11336 | |
| TAF7 | - | - | 11434 | |
| UTF1 | - | - | 11553 | |
| FOXD4 | - | - | 11635 | |
| IRF1 | - | -1 | 11641 | |
| IL26 | - | - | 11645 | |
| PAX9 | - | -1 | 11940 | |
| THRAP3 | - | - | 12089 | |
| KDM1A | - | - | 12183 | |
| TCF7L1 | - | - | 12273 | |
| RXRA | 0.25 | 1 | 12299 | |
| MYOG | - | - | 12349 | |
| SIX1 | - | -1 | 12393 | |
| FOXP3 | - | -1 | 12457 | |
| GATA4 | - | -1 | 12466 | |
| HEYL | - | - | 12571 | |
| IL17F | - | - | 12626 | |
| NFIC | - | - | 12633 | |
| IL6 | - | -1 | 12695 | |
| USF1 | - | - | 12725 | |
| TLR4 | - | -1 | 12795 | |
| HDAC1 | - | - | 12825 | |
| SMARCB1 | - | -1 | 12857 | |
| EOMES | - | - | 12952 | |
| MAFA | - | - | 13014 | |
| TGFB3 | - | -1 | 13097 | |
| FGF2 | - | - | 13150 | |
| HOXB1 | 0.25 | 1 | 13245 | |
| TLR9 | - | - | 13360 | |
| IL33 | - | - | 13620 | |
| FOXC1 | - | -1 | 13793 | |
| MESP1 | - | - | 13805 | |
| PLAGL1 | - | - | 13916 | |
| FOXD4L5 | - | - | 13951 | |
| NUFIP1 | - | - | 14035 | |
| RHOQ | - | - | 14092 | |
| FOXO6 | - | - | 14502 | |
| GDF2 | - | - | 14603 | |
| HNF1A | - | -1 | 14631 | |
| POMC | 0.25 | 1 | 14990 | |
| BSX | - | - | 15113 | |
| TNF | 0.25 | 1 | 15243 | |
| EVX1 | - | - | 15344 | |
| PPARGC1B | - | -1 | 15356 | |
| STK16 | - | - | 16008 | |
| FOXD4L2 | - | - | 16505 | |
| INHBA | - | - | 16974 | |
| TBX19 | - | - | 17620 | |
| ARHGEF10L | - | - | 17881 | |
| TP53 | 0.25 | 1 | 18277 | |
| SHH | - | -1 | 18571 | |
| SS18 | - | - | 18696 | |
| TP73 | - | - | 18810 | |
| TLR2 | - | -1 | 19246 | |
| SREBF1 | - | - | 19464 | |
| TEAD2 | - | - | 19466 | |
| HHEX | - | - | 19523 | |
| FOXD4L6 | - | - | 19555 | |
| SKAP1 | - | - | 19568 | |
| OSM | - | - | 19580 | |
| NLRC5 | - | - | 19618 | |
| POU5F1 | - | - | 19704 | |
| ARRB1 | - | - | 19906 | |
| F2RL1 | - | - | 19969 | |
| MEOX1 | - | - | 20002 | |
| AKIRIN2 | - | - | 20005 | |
| AHR | - | - | 20015 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| FOXS1 | - | - | 20143 | |
| ATF6 | - | - | 20267 | |
| NFKB1 | - | - | 20281 | |
| JAK3 | - | - | 20340 | |
| RBM14 | - | - | 20547 | |
| CDKN2A | - | -1 | 20587 | |
| CREB3L4 | - | - | 20714 | |
| SOX18 | - | - | 20812 | |
| OSR2 | - | - | 20931 | |
| STAT5A | - | - | 21176 | |
| ESRRA | - | - | 21277 | |
| INO80 | - | - | 21496 | |
| MNAT1 | - | - | 21615 | |
| PITX1 | 0.25 | 1 | 21646 | |
| ERCC2 | - | -1 | 21804 | |
| DCAF6 | - | - | 21864 | |
| HMGN3 | - | - | 21870 | |
| LIF | - | - | 22134 | |
| ITGA6 | - | - | 22166 | |
| RNF10 | - | - | 22383 | |
| UHRF1 | - | - | 22392 | |
| IGF2 | 0.25 | 1 | 22401 | |
| TLR3 | - | - | 22478 | |
| TP63 | - | -1 | 22528 | |
| DDX58 | - | - | 22544 | |
| CYR61 | - | - | 22574 | |
| RFXANK | - | -1 | 22636 | |
| RIPK1 | - | - | 22681 | |
| MESP2 | - | -1 | 22723 | |
| PPARG | - | -1 | 22729 | |
| XRCC6 | - | - | 22834 | |
| TNFRSF1A | - | - | 22842 | |
| GABPB1 | - | - | 22961 | |
| HNF4A | - | -1 | 22965 | |
| E2F1 | - | - | 23057 | |
| MYD88 | - | - | 23106 | |
| IRAK4 | - | - | 23154 | |
| AATF | - | - | 23243 | |
| FZD5 | - | - | 23249 | |
| ADRB2 | 0.25 | 1 | 23251 | |
| GABPA | - | - | 23253 | |
| FADD | - | - | 23261 | |
| MAVS | - | - | 23348 | |
| C1orf85 | - | - | 23495 | |
| CD3D | - | - | 23498 | |
| KAT2B | - | - | 23529 | |
| SLC11A1 | - | - | 23561 | |
| SQSTM1 | - | -1 | 23584 | |
| SRA1 | - | - | 23586 | |
| ELL3 | - | - | 23659 | |
| GTF2F2 | - | - | 23723 | |
| CRLF3 | - | - | 23856 | |
| BLOC1S2 | - | - | 24061 | |
| SPDEF | - | - | 24165 | |
| MOSPD1 | - | - | 24168 | |
| ATF1 | - | - | 24277 | |
| WWTR1 | - | - | 24317 | |
| PRKDC | - | - | 24421 | |
| IRF7 | - | - | 24488 | |
| PSMC3IP | - | - | 24571 | |
| BRCA1 | - | -1 | 24573 | |
| TMEM173 | - | - | 24599 | |
| TAF2 | - | - | 24673 | |
| ENG | - | -1 | 24746 | |
| FHOD1 | - | - | 24802 | |
| NFATC1 | - | - | 24911 | |
| NR1H3 | - | - | 25006 | |
| FSTL3 | - | - | 25154 | |
| CENPK | - | - | 25195 | |
| TEAD4 | - | - | 25568 | |
| FOXM1 | - | - | 25656 | |
| PUS1 | - | - | 25718 |
GO:0045944
| Name | Description | External IDs |
| ATXN1 | ataxin 1 | Entrez:6310  Ensembl: ENSG00000124788  HPRD: 03333  HGNC: 10548  |
| ZNF148 | zinc finger protein 148 | Entrez:7707  HGNC: 12933  Ensembl: ENSG00000163848  HPRD: 03540  |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | Entrez:53335  Ensembl: ENSG00000119866  HGNC: 13221  HPRD: 05949  |
| NRIP1 | nuclear receptor interacting protein 1 | Entrez:8204  Ensembl: ENSG00000180530  HGNC: 8001  HPRD: 03927  |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ATXN1 | ataxin 1 | ||||
| ZNF148 | zinc finger protein 148 | ||||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | ||||
| NRIP1 | nuclear receptor interacting protein 1 | ||||
| SOX11 | SRY (sex determining region Y)-box 11 |
| Query gene | Gene | Gene description | Edge score |
| ATXN1 | ATXN1 | ataxin 1 | |
| ZNF148 | ZNF148 | zinc finger protein 148 | |
| BCL11A | BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | |
| NRIP1 | NRIP1 | nuclear receptor interacting protein 1 | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 |