| Gene | Input weight | Standard | Rank | |
| ERBB4 | 0.25 | 1 | 86 | |
| FBXW7 | - | - | 198 | |
| SOX2 | - | -1 | 200 | |
| FGFR2 | - | -1 | 237 | |
| FGF9 | - | - | 262 | |
| APC | 0.25 | 1 | 266 | |
| LRP6 | - | - | 279 | |
| BMPR2 | - | -1 | 281 | |
| NF1 | 0.25 | 1 | 372 | |
| SFRP1 | - | - | 387 | |
| FOXP1 | 1.0 | 1 | 435 | |
| JUN | - | - | 511 | |
| PAX6 | 0.25 | 1 | 544 | |
| PAX2 | - | - | 653 | |
| CCND2 | - | - | 782 | |
| SMAD3 | - | - | 823 | |
| TGFB2 | - | - | 834 | |
| SOX9 | - | -1 | 970 | |
| PTCH1 | - | -1 | 972 | |
| PROX1 | - | - | 997 | |
| MED1 | - | - | 1034 | |
| HIF1A | - | - | 1075 | |
| BMPR1A | - | - | 1140 | |
| CDKN1B | - | - | 1162 | |
| BAD | - | - | 1290 | |
| FZD7 | - | - | 1357 | |
| SCG2 | - | - | 1369 | |
| PTEN | 1.0 | 1 | 1389 | |
| WNT10B | - | - | 1517 | |
| CDH13 | - | - | 1692 | |
| CDK6 | - | - | 1795 | |
| TGFA | - | - | 1873 | |
| FGF1 | - | - | 1892 | |
| AR | 0.25 | 1 | 1902 | |
| MCC | - | - | 2167 | |
| ROBO1 | - | - | 2182 | |
| WNT2 | 0.25 | 1 | 2299 | |
| GATA3 | - | - | 2376 | |
| EGFR | - | -1 | 2546 | |
| FGF7 | - | - | 2591 | |
| FGFR3 | - | -1 | 2640 | |
| WFDC1 | - | - | 2701 | |
| DLX5 | - | - | 2706 | |
| IGF1 | 0.25 | 1 | 2793 | |
| NOTCH1 | - | -1 | 2865 | |
| PGR | - | - | 2926 | |
| CDKN1C | - | -1 | 2938 | |
| NR2F2 | - | - | 2941 | |
| PRL | 0.25 | 1 | 2977 | |
| DEAF1 | 1.0 | 1 | 3084 | |
| LECT1 | - | - | 3124 | |
| DLX6 | 0.25 | 1 | 3129 | |
| VASH1 | 0.25 | 1 | 3148 | |
| WNT5A | - | - | 3319 | |
| HMGB2 | - | - | 3362 | |
| DAB2IP | - | - | 3482 | |
| FOXE3 | - | -1 | 3688 | |
| NME2 | - | - | 3712 | |
| ALDH1A2 | - | - | 3771 | |
| DLG1 | - | - | 3822 | |
| EDNRA | - | -1 | 3857 | |
| MAGED1 | - | - | 4068 | |
| VEGFA | 0.25 | 1 | 4087 | |
| FOXP2 | 0.5 | 1 | 4163 | |
| VASH2 | - | - | 4218 | |
| BMP6 | - | - | 4358 | |
| FGF10 | - | -1 | 4532 | |
| PTPRM | - | - | 4769 | |
| NKX3-1 | - | - | 4793 | |
| KDR | 0.25 | 1 | 4854 | |
| BMP2 | - | -1 | 4855 | |
| MAP2K5 | - | - | 4962 | |
| ZNF703 | - | - | 5031 | |
| HRAS | 0.25 | 1 | 5086 | |
| HOXA5 | - | - | 5132 | |
| SFRP2 | - | - | 5252 | |
| NOG | - | -1 | 5439 | |
| OSR1 | - | - | 5691 | |
| STK11 | - | -1 | 6000 | |
| KRIT1 | - | - | 6163 | |
| PGF | - | - | 6172 | |
| RUNX3 | - | - | 6322 | |
| BMP4 | - | -1 | 6499 | |
| PPARD | - | - | 6562 | |
| TGFBR3 | - | - | 6672 | |
| GAS1 | - | - | 6937 | |
| HTR2B | - | - | 6992 | |
| IHH | - | -1 | 7160 | |
| FRS2 | - | - | 7173 | |
| WNT7A | - | - | 7312 | |
| CYBA | - | -1 | 7322 | |
| TNMD | - | - | 7369 | |
| LACRT | - | - | 7733 | |
| CXCL12 | - | - | 7802 | |
| GPC3 | - | -1 | 8430 | |
| EREG | - | - | 9052 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| GHRL | 0.25 | 1 | 9242 | |
| TSC2 | 0.25 | 1 | 9351 | |
| CCL11 | - | - | 9615 | |
| SMO | 0.25 | 1 | 10504 | |
| F3 | - | - | 10889 | |
| APOH | - | - | 11562 | |
| TACR1 | - | - | 11618 | |
| GPX1 | 0.25 | 1 | 11644 | |
| IL26 | - | - | 11645 | |
| ACVRL1 | - | -1 | 11656 | |
| ITGB3 | 0.5 | 1 | 11817 | |
| VEGFB | - | - | 11980 | |
| AIMP1 | - | - | 12043 | |
| NKX2-8 | - | - | 12202 | |
| EPGN | - | - | 12503 | |
| IL6 | - | -1 | 12695 | |
| VEGFC | - | - | 12850 | |
| FGF2 | - | - | 13150 | |
| THBS4 | - | - | 13380 | |
| MMP12 | - | - | 13535 | |
| NME1 | - | -1 | 13556 | |
| NRARP | - | - | 14597 | |
| GDF2 | - | - | 14603 | |
| CDKN2B | - | - | 14806 | |
| SHH | - | -1 | 18571 | |
| IQGAP3 | - | - | 19438 | |
| ARG1 | - | -1 | 19499 | |
| TGFB1 | 0.25 | 1 | 20135 | |
| POLD4 | - | - | 20313 | |
| CDKN2A | - | -1 | 20587 | |
| OSR2 | - | - | 20931 | |
| TNFSF12 | - | - | 20965 | |
| PDGFB | - | - | 21071 | |
| MTOR | - | - | 21095 | |
| AGGF1 | - | - | 21258 | |
| NOD2 | - | -1 | 21514 | |
| SAV1 | - | - | 21620 | |
| EAF2 | - | - | 21685 | |
| CCL24 | - | - | 21868 | |
| KRT4 | - | -1 | 22318 | |
| ATP5A1 | - | - | 22338 | |
| SERPINB5 | - | - | 22491 | |
| ATPIF1 | - | - | 22561 | |
| B4GALT1 | - | -1 | 22700 | |
| CCL26 | - | - | 22814 | |
| ARNT | - | - | 23123 | |
| ERBB2 | - | -1 | 23130 | |
| LAMC1 | - | - | 23363 | |
| APOE | 0.25 | 1 | 23516 | |
| TINF2 | - | - | 24033 | |
| THBS1 | - | - | 24444 | |
| BRCA2 | - | -1 | 24637 | |
| LAMB1 | 0.5 | 1 | 24677 | |
| ENG | - | -1 | 24746 | |
| ECM1 | - | -1 | 24768 | |
| ANG | - | -1 | 24879 | |
| SERPINF1 | - | - | 25093 | |
| CAV2 | - | - | 25271 | |
| CAV1 | - | -1 | 25381 |
GO:0050678
| Name | Description | External IDs |
| ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | Entrez:2066  HGNC: 3432  HPRD: 02767  Ensembl: ENSG00000178568  |
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase | Entrez:55294  HPRD: 05888  Ensembl: ENSG00000109670  HGNC: 16712  |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657  HGNC: 11195  HPRD: 08921  Ensembl: ENSG00000181449  |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| FGF9 | fibroblast growth factor 9 | Entrez:2254  HPRD: 02951  HGNC: 3687  Ensembl: ENSG00000102678  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | ||||
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase | ||||
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| FGF9 | fibroblast growth factor 9 |
| Query gene | Gene | Gene description | Edge score |
| ERBB4 | ERBB4 | v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 | |
| FBXW7 | FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase | |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| FGF9 | FGF9 | fibroblast growth factor 9 |