| Gene | Input weight | Standard | Rank | |
| NIPBL | - | -1 | 7 | |
| SOX11 | - | - | 96 | |
| FGFR2 | - | -1 | 237 | |
| SOX4 | - | - | 250 | |
| LRP6 | - | - | 279 | |
| CHD7 | - | -1 | 416 | |
| MEF2C | 0.25 | 1 | 428 | |
| JUN | - | - | 511 | |
| NPY5R | 0.25 | 1 | 725 | |
| ZIC3 | - | -1 | 789 | |
| SMARCA4 | - | - | 801 | |
| SMAD3 | - | - | 823 | |
| TGFB2 | - | - | 834 | |
| ZMIZ1 | - | - | 861 | |
| ZFPM2 | - | -1 | 867 | |
| SOX9 | - | -1 | 970 | |
| PTCH1 | - | -1 | 972 | |
| PROX1 | - | - | 997 | |
| NPY2R | 0.25 | 1 | 1024 | |
| HIF1A | - | - | 1075 | |
| BMPR1A | - | - | 1140 | |
| MIB1 | 0.25 | 1 | 1153 | |
| NPY1R | 0.25 | 1 | 1190 | |
| SMAD7 | - | - | 1192 | |
| HEY1 | - | - | 1280 | |
| DLC1 | - | - | 1282 | |
| FKBP1A | - | - | 1284 | |
| ATF2 | - | - | 1309 | |
| COL4A3BP | - | - | 1742 | |
| VANGL2 | - | - | 1793 | |
| WHSC1 | - | - | 1948 | |
| ISL1 | - | - | 1974 | |
| UBE4B | - | - | 2086 | |
| DVL3 | - | - | 2090 | |
| CPE | - | - | 2149 | |
| MSX2 | - | -1 | 2260 | |
| WNT2 | 0.25 | 1 | 2299 | |
| GATA3 | - | - | 2376 | |
| BAZ1B | - | - | 2716 | |
| COL11A1 | 0.25 | 1 | 2725 | |
| RTN4 | - | - | 2735 | |
| SHOX2 | - | - | 2767 | |
| TBX5 | - | - | 2836 | |
| MEF2A | - | - | 2837 | |
| SRF | - | - | 2841 | |
| C2CD3 | - | - | 2994 | |
| MSX1 | - | -1 | 3127 | |
| NODAL | - | -1 | 3149 | |
| HEY2 | - | - | 3174 | |
| WNT5A | - | - | 3319 | |
| RBP4 | - | - | 3448 | |
| FOXF1 | - | -1 | 3518 | |
| HAND1 | - | - | 3590 | |
| ALDH1A2 | - | - | 3771 | |
| SOX17 | - | - | 4024 | |
| VEGFA | 0.25 | 1 | 4087 | |
| WNT16 | - | - | 4117 | |
| GSK3A | - | - | 4141 | |
| RBM15 | - | - | 4247 | |
| WNT3A | - | - | 4747 | |
| COL2A1 | - | -1 | 4839 | |
| BMP2 | - | -1 | 4855 | |
| TH | 0.25 | 1 | 4933 | |
| BMP10 | - | - | 5102 | |
| SFRP2 | - | - | 5252 | |
| GAA | - | -1 | 5434 | |
| HAND2 | - | - | 5589 | |
| TTN | - | -1 | 5620 | |
| SMARCD3 | - | - | 5635 | |
| INSR | - | -1 | 5872 | |
| HES1 | 0.25 | 1 | 5912 | |
| BMP4 | - | -1 | 6499 | |
| DVL2 | - | - | 6546 | |
| TGFBR3 | - | - | 6672 | |
| TNNT2 | - | -1 | 6745 | |
| HTR2B | - | - | 6992 | |
| IHH | - | -1 | 7160 | |
| TAB1 | - | - | 7218 | |
| FOXJ1 | - | - | 7628 | |
| MYBPC3 | - | -1 | 7697 | |
| WNT11 | - | - | 7820 | |
| TBX2 | - | - | 8392 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| TBX20 | - | -1 | 8764 | |
| MYL2 | - | -1 | 8834 | |
| LBX1 | - | - | 9134 | |
| SUFU | - | -1 | 9372 | |
| BBS4 | - | -1 | 10131 | |
| FOXC2 | - | - | 10175 | |
| SMO | 0.25 | 1 | 10504 | |
| FGFRL1 | - | - | 10721 | |
| GATA6 | - | -1 | 10828 | |
| BBS5 | - | -1 | 10945 | |
| FOXH1 | - | - | 10963 | |
| LY6E | - | - | 12003 | |
| RXRA | 0.25 | 1 | 12299 | |
| GATA4 | - | -1 | 12466 | |
| IFT88 | - | - | 12504 | |
| ACTC1 | - | -1 | 12547 | |
| HEYL | - | - | 12571 | |
| TNNI3 | - | -1 | 12758 | |
| PTCD2 | - | - | 12935 | |
| MYLK2 | - | -1 | 13626 | |
| FOXC1 | - | -1 | 13793 | |
| MESP1 | - | - | 13805 | |
| MYH6 | - | -1 | 13823 | |
| GJA1 | 0.25 | 1 | 13867 | |
| MKKS | - | -1 | 14510 | |
| IFT52 | - | - | 16599 | |
| FZD2 | - | - | 16930 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| FOXS1 | - | - | 20143 | |
| ADAM15 | - | - | 20402 | |
| MYH7 | - | -1 | 20417 | |
| MYL3 | - | -1 | 20524 | |
| FZD1 | - | - | 20775 | |
| SOX18 | - | - | 20812 | |
| EFNA1 | - | - | 21477 | |
| ADAMTS1 | - | - | 21551 | |
| TNNI1 | - | - | 21993 | |
| BBS7 | - | -1 | 22032 | |
| TCAP | - | -1 | 22131 | |
| CYR61 | - | - | 22574 | |
| SETDB2 | 0.25 | 1 | 22691 | |
| PPP1R13L | - | - | 23749 | |
| TNNC1 | - | -1 | 23782 | |
| TPM1 | - | -1 | 24247 | |
| ENG | - | -1 | 24746 | |
| COL5A1 | - | -1 | 25296 |
GO:0003007
| Name | Description | External IDs |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836 HPRD: 10560 HGNC: 28862 Ensembl: ENSG00000164190 |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664 HGNC: 11191 Ensembl: ENSG00000176887 HPRD: 02940 |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| SOX4 | SRY (sex determining region Y)-box 4 | Entrez:6659 HPRD: 01695 HGNC: 11200 Ensembl: ENSG00000124766 |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040 Ensembl: ENSG00000070018 HGNC: 6698 HPRD: 04617 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| SOX4 | SRY (sex determining region Y)-box 4 | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 |
| Query gene | Gene | Gene description | Edge score |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| SOX4 | SOX4 | SRY (sex determining region Y)-box 4 | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 |