| Gene | Input weight | Standard | Rank | |
| HIPK1 | - | - | 311 | |
| PAX6 | 0.25 | 1 | 544 | |
| PTCH1 | - | -1 | 972 | |
| HIPK2 | - | - | 1051 | |
| NKX2-2 | - | - | 1120 | |
| DYRK2 | - | - | 1203 | |
| WNT10B | - | - | 1517 | |
| PTCHD1 | 1.0 | 1 | 2465 | |
| TULP3 | - | - | 2770 | |
| MAP3K10 | - | - | 2968 | |
| CDON | - | - | 3487 | |
| FOXF1 | - | -1 | 3518 | |
| NKX6-1 | - | - | 4665 | |
| HES5 | - | - | 4919 | |
| NDST1 | - | - | 5114 | |
| HES1 | 0.25 | 1 | 5912 | |
| GLI3 | - | -1 | 6261 | |
| BMP4 | - | -1 | 6499 | |
| BOC | - | - | 6901 | |
| GLI2 | - | -1 | 7307 | |
| PTCHD2 | - | - | 8030 | |
| DISP2 | - | - | 8238 | |
| TGFBR2 | - | -1 | 10407 | |
| SMO | 0.25 | 1 | 10504 | |
| TCTN2 | - | - | 11040 | |
| IFT88 | - | - | 12504 | |
| HHAT | - | - | 13234 | |
| IFT52 | - | - | 16599 | |
| SHH | - | -1 | 18571 | |
| STK36 | - | - | 21217 | |
| IFT172 | - | - | 22658 | |
| DISP1 | - | - | 22983 | |
| NSDHL | - | - | 23481 |
GO:0007224
| Name | Description | External IDs |
| HIPK1 | homeodomain interacting protein kinase 1 | Entrez:204851  HGNC: 19006  Ensembl: ENSG00000163349  HPRD: 06418  |
| PAX6 | paired box 6 | Entrez:5080  HPRD: 06167  Ensembl: ENSG00000007372  HGNC: 8620  |
| PTCH1 | patched 1 | Entrez:5727  Ensembl: ENSG00000185920  HGNC: 9585  HPRD: 03200  |
| HIPK2 | homeodomain interacting protein kinase 2 | Entrez:28996  HPRD: 06039  HGNC: 14402  Ensembl: ENSG00000064393  |
| NKX2-2 | NK2 homeobox 2 | Entrez:4821  Ensembl: ENSG00000125820  HGNC: 7835  HPRD: 05213  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| HIPK1 | homeodomain interacting protein kinase 1 | ||||
| PAX6 | paired box 6 | ||||
| PTCH1 | patched 1 | ||||
| HIPK2 | homeodomain interacting protein kinase 2 | ||||
| NKX2-2 | NK2 homeobox 2 |
| Query gene | Gene | Gene description | Edge score |
| HIPK1 | HIPK1 | homeodomain interacting protein kinase 1 | |
| PAX6 | PAX6 | paired box 6 | |
| PTCH1 | PTCH1 | patched 1 | |
| HIPK2 | HIPK2 | homeodomain interacting protein kinase 2 | |
| NKX2-2 | NKX2-2 | NK2 homeobox 2 |