| Gene | Input weight | Standard | Rank | |
| LRP6 | - | - | 279 | |
| ZIC3 | - | -1 | 789 | |
| SMAD3 | - | - | 823 | |
| ACVR2A | - | - | 965 | |
| PCSK6 | - | - | 1035 | |
| HIF1A | - | - | 1075 | |
| MIB1 | 0.25 | 1 | 1153 | |
| RFX3 | - | - | 1523 | |
| ACVR2B | - | -1 | 1676 | |
| VANGL2 | - | - | 1793 | |
| DLL1 | - | - | 2053 | |
| NKX3-2 | - | - | 2620 | |
| CITED2 | - | - | 2650 | |
| SRF | - | - | 2841 | |
| NOTCH1 | - | -1 | 2865 | |
| C2CD3 | - | - | 2994 | |
| NODAL | - | -1 | 3149 | |
| TGIF1 | - | -1 | 3264 | |
| WNT5A | - | - | 3319 | |
| WNT8B | - | - | 3407 | |
| FOXF1 | - | -1 | 3518 | |
| HAND1 | - | - | 3590 | |
| ALDH1A2 | - | - | 3771 | |
| SOX17 | - | - | 4024 | |
| AXIN1 | - | -1 | 4419 | |
| FGF10 | - | -1 | 4532 | |
| WNT3A | - | - | 4747 | |
| KIF3B | - | - | 4833 | |
| ARL6 | - | -1 | 5581 | |
| HAND2 | - | - | 5589 | |
| ACVR1 | - | -1 | 6054 | |
| RTTN | - | - | 7129 | |
| IHH | - | -1 | 7160 | |
| DNAH11 | - | -1 | 7284 | |
| CFC1 | - | -1 | 7488 | |
| FOXJ1 | - | - | 7628 | |
| RIPPLY2 | - | - | 7657 | |
| NKX2-5 | 0.25 | 1 | 8486 | |
| PITX2 | - | -1 | 8708 | |
| TBX20 | - | -1 | 8764 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| LBX1 | - | - | 9134 | |
| CCDC39 | - | - | 9326 | |
| SUFU | - | -1 | 9372 | |
| BBS4 | - | -1 | 10131 | |
| SMO | 0.25 | 1 | 10504 | |
| BBS5 | - | -1 | 10945 | |
| FOXH1 | - | - | 10963 | |
| CCDC40 | - | - | 11931 | |
| GATA4 | - | -1 | 12466 | |
| IFT88 | - | - | 12504 | |
| DAND5 | - | - | 12647 | |
| MESP1 | - | - | 13805 | |
| GJA1 | 0.25 | 1 | 13867 | |
| MKKS | - | -1 | 14510 | |
| IFT52 | - | - | 16599 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| DYNC2LI1 | - | - | 19766 | |
| SOX18 | - | - | 20812 | |
| OFD1 | - | -1 | 20899 | |
| RPGRIP1L | - | - | 21472 | |
| BBS7 | - | -1 | 22032 | |
| IFT172 | - | - | 22658 | |
| SETDB2 | 0.25 | 1 | 22691 | |
| DISP1 | - | - | 22983 | |
| ENG | - | -1 | 24746 |
GO:0009855
| Name | Description | External IDs |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040 Ensembl: ENSG00000070018 HGNC: 6698 HPRD: 04617 |
| ZIC3 | Zic family member 3 | Entrez:7547 HGNC: 12874 HPRD: 02225 Ensembl: ENSG00000156925 |
| SMAD3 | SMAD family member 3 | Entrez:4088 HPRD: 04380 HGNC: 6769 Ensembl: ENSG00000166949 |
| ACVR2A | activin A receptor, type IIA | Entrez:92 HGNC: 173 HPRD: 00025 Ensembl: ENSG00000121989 |
| PCSK6 | proprotein convertase subtilisin/kexin type 6 | Entrez:5046 HPRD: 01329 HGNC: 8569 Ensembl: ENSG00000140479 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| ZIC3 | Zic family member 3 | ||||
| SMAD3 | SMAD family member 3 | ||||
| ACVR2A | activin A receptor, type IIA | ||||
| PCSK6 | proprotein convertase subtilisin/kexin type 6 |
| Query gene | Gene | Gene description | Edge score |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| ZIC3 | ZIC3 | Zic family member 3 | |
| SMAD3 | SMAD3 | SMAD family member 3 | |
| ACVR2A | ACVR2A | activin A receptor, type IIA | |
| PCSK6 | PCSK6 | proprotein convertase subtilisin/kexin type 6 |