| Gene | Input weight | Standard | Rank | |
| LRP6 | - | - | 279 | |
| PAX6 | 0.25 | 1 | 544 | |
| PTCH1 | - | -1 | 972 | |
| WNT10B | - | - | 1517 | |
| FOXA2 | - | - | 2645 | |
| TULP3 | - | - | 2770 | |
| BMI1 | - | - | 3300 | |
| PAX7 | - | -1 | 3577 | |
| WNT1 | - | - | 4383 | |
| GBX2 | - | - | 4440 | |
| WNT3 | - | - | 4613 | |
| WNT3A | - | - | 4747 | |
| EN1 | - | - | 5021 | |
| MNX1 | - | - | 5812 | |
| HES1 | 0.25 | 1 | 5912 | |
| GLI3 | - | -1 | 6261 | |
| BMP4 | - | -1 | 6499 | |
| GAS1 | - | - | 6937 | |
| HES3 | - | - | 7466 | |
| KDM2B | - | - | 8359 | |
| GSC | - | - | 9702 | |
| SMO | 0.25 | 1 | 10504 | |
| PSEN1 | - | - | 18523 | |
| SHH | - | -1 | 18571 | |
| RPGRIP1L | - | - | 21472 | |
| PSEN2 | - | - | 23095 |
GO:0021532
| Name | Description | External IDs |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040  Ensembl: ENSG00000070018  HGNC: 6698  HPRD: 04617  |
| PAX6 | paired box 6 | Entrez:5080  HPRD: 06167  Ensembl: ENSG00000007372  HGNC: 8620  |
| PTCH1 | patched 1 | Entrez:5727  Ensembl: ENSG00000185920  HGNC: 9585  HPRD: 03200  |
| WNT10B | wingless-type MMTV integration site family, member 10B | Entrez:7480  Ensembl: ENSG00000169884  HGNC: 12775  HPRD: 03548  |
| FOXA2 | forkhead box A2 | Entrez:3170  HGNC: 5022  Ensembl: ENSG00000125798  HPRD: 02618  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| PAX6 | paired box 6 | ||||
| PTCH1 | patched 1 | ||||
| WNT10B | wingless-type MMTV integration site family, member 10B | ||||
| FOXA2 | forkhead box A2 |
| Query gene | Gene | Gene description | Edge score |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| PAX6 | PAX6 | paired box 6 | |
| PTCH1 | PTCH1 | patched 1 | |
| WNT10B | WNT10B | wingless-type MMTV integration site family, member 10B | |
| FOXA2 | FOXA2 | forkhead box A2 |