| Gene | Input weight | Standard | Rank | |
| LRP6 | - | - | 279 | |
| RARB | 0.25 | 1 | 300 | |
| CHD7 | - | -1 | 416 | |
| DICER1 | - | -1 | 762 | |
| SMARCA4 | - | - | 801 | |
| MED1 | - | - | 1034 | |
| GNAS | - | -1 | 1842 | |
| NOTCH1 | - | -1 | 2865 | |
| ALX3 | - | - | 4288 | |
| WNT3 | - | - | 4613 | |
| RSPO2 | - | - | 4631 | |
| FGF4 | - | - | 4938 | |
| MECOM | - | - | 4979 | |
| OSR1 | - | - | 5691 | |
| ALX4 | - | - | 5932 | |
| BMP4 | - | -1 | 6499 | |
| WNT7A | - | - | 7312 | |
| MMP13 | - | -1 | 7779 | |
| GPC3 | - | -1 | 8430 | |
| RARG | 0.25 | 1 | 8575 | |
| CTNNB1 | 0.5 | 1 | 9066 | |
| SHH | - | -1 | 18571 | |
| OSR2 | - | - | 20931 | |
| RPGRIP1L | - | - | 21472 | |
| PITX1 | 0.25 | 1 | 21646 |
GO:0035116
| Name | Description | External IDs |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040  Ensembl: ENSG00000070018  HGNC: 6698  HPRD: 04617  |
| RARB | retinoic acid receptor, beta | Entrez:5915  HPRD: 07183  Ensembl: ENSG00000077092  HGNC: 9865  |
| CHD7 | chromodomain helicase DNA binding protein 7 | Entrez:55636  Ensembl: ENSG00000171316  HGNC: 20626  HPRD: 10595  |
| DICER1 | dicer 1, ribonuclease type III | Entrez:23405  HGNC: 17098  Ensembl: ENSG00000100697  HPRD: 05875  |
| SMARCA4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | Entrez:6597  HPRD: 04459  HGNC: 11100  Ensembl: ENSG00000127616  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| RARB | retinoic acid receptor, beta | ||||
| CHD7 | chromodomain helicase DNA binding protein 7 | ||||
| DICER1 | dicer 1, ribonuclease type III | ||||
| SMARCA4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
| Query gene | Gene | Gene description | Edge score |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| RARB | RARB | retinoic acid receptor, beta | |
| CHD7 | CHD7 | chromodomain helicase DNA binding protein 7 | |
| DICER1 | DICER1 | dicer 1, ribonuclease type III | |
| SMARCA4 | SMARCA4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |