| Gene | Input weight | Standard | Rank | |
| SOX11 | - | - | 66 | |
| FGFR2 | - | -1 | 165 | |
| NIPBL | - | -1 | 561 | |
| SOX10 | - | -1 | 1510 | |
| SMAD3 | - | - | 1541 | |
| FGFR3 | - | -1 | 1648 | |
| ID2 | - | - | 1719 | |
| SHOX2 | - | - | 2149 | |
| NODAL | - | -1 | 2184 | |
| EGFR | - | -1 | 2811 | |
| WNT5A | - | - | 2870 | |
| FOXF1 | - | -1 | 3053 | |
| ACVR2B | - | -1 | 3179 | |
| EPB41L5 | - | - | 3311 | |
| NOTCH1 | - | -1 | 3360 | |
| SOX17 | - | - | 3484 | |
| HOXA13 | - | - | 3602 | |
| FGF10 | - | -1 | 4373 | |
| HOXD13 | 0.25 | 1 | 4465 | |
| WNT11 | - | - | 4528 | |
| IHH | - | -1 | 4742 | |
| TCF21 | - | - | 5065 | |
| BMP4 | - | -1 | 5180 | |
| NKX2-3 | - | - | 5540 | |
| GLI2 | - | -1 | 5731 | |
| SMO | 0.25 | 1 | 5864 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| SMAD2 | - | - | 7224 | |
| STRA6 | - | -1 | 7612 | |
| TINAG | - | - | 7755 | |
| GLI3 | - | -1 | 9032 | |
| HNF1B | - | -1 | 9562 | |
| GATA4 | - | -1 | 11137 | |
| FOXP4 | - | - | 12411 | |
| STX2 | - | - | 13464 | |
| TCF7 | - | - | 14920 | |
| SHH | - | -1 | 15942 | |
| TP73 | - | - | 15964 | |
| IL18 | - | - | 22799 | |
| TP63 | - | -1 | 24113 | |
| BBS7 | - | -1 | 24350 |
GO:0048546
| Name | Description | External IDs |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| NIPBL | Nipped-B homolog (Drosophila) | Entrez:25836  HPRD: 10560  HGNC: 28862  Ensembl: ENSG00000164190  |
| SOX10 | SRY (sex determining region Y)-box 10 | Entrez:6663  Ensembl: ENSG00000100146  HGNC: 11190  HPRD: 03752  |
| SMAD3 | SMAD family member 3 | Entrez:4088  HPRD: 04380  HGNC: 6769  Ensembl: ENSG00000166949  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| NIPBL | Nipped-B homolog (Drosophila) | ||||
| SOX10 | SRY (sex determining region Y)-box 10 | ||||
| SMAD3 | SMAD family member 3 |
| Query gene | Gene | Gene description | Edge score |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| NIPBL | NIPBL | Nipped-B homolog (Drosophila) | |
| SOX10 | SOX10 | SRY (sex determining region Y)-box 10 | |
| SMAD3 | SMAD3 | SMAD family member 3 |