| Gene | Input weight | Standard | Rank | |
| SOX11 | - | - | 66 | |
| SATB2 | 0.25 | 1 | 108 | |
| RYBP | - | - | 135 | |
| FGFR2 | - | -1 | 165 | |
| MECP2 | 1.0 | 1 | 217 | |
| ZBTB18 | - | - | 243 | |
| MEF2C | 0.25 | 1 | 248 | |
| BPTF | - | - | 270 | |
| NFIB | - | - | 271 | |
| NRIP1 | - | - | 289 | |
| POU4F1 | - | - | 292 | |
| ENO1 | - | - | 297 | |
| RARB | 0.25 | 1 | 325 | |
| SALL1 | - | - | 408 | |
| OLIG2 | - | - | 420 | |
| KLF12 | - | - | 445 | |
| ZMYND11 | - | - | 448 | |
| TRIM28 | - | - | 472 | |
| THRA | - | - | 485 | |
| POU4F2 | - | - | 535 | |
| NIPBL | - | -1 | 561 | |
| DRAP1 | - | - | 587 | |
| TCF4 | - | - | 610 | |
| ZNF148 | - | - | 636 | |
| FEZF2 | 0.25 | 1 | 712 | |
| ST18 | - | - | 714 | |
| THRB | - | -1 | 735 | |
| SMARCA4 | - | - | 751 | |
| DICER1 | - | -1 | 834 | |
| ATN1 | - | -1 | 941 | |
| PKIA | - | - | 959 | |
| PROX1 | - | - | 962 | |
| HDAC4 | - | - | 963 | |
| CTBP1 | - | - | 1017 | |
| ZFPM2 | - | -1 | 1023 | |
| XPO1 | - | - | 1054 | |
| SMARCA2 | - | - | 1077 | |
| TRPS1 | - | -1 | 1089 | |
| HEY1 | - | - | 1114 | |
| FOXP1 | 0.5 | 1 | 1117 | |
| NCOA2 | - | - | 1159 | |
| ID4 | - | - | 1171 | |
| SATB1 | - | - | 1214 | |
| NR2F1 | - | - | 1220 | |
| DLX2 | 0.25 | 1 | 1235 | |
| SMAD7 | - | - | 1283 | |
| TBL1XR1 | 0.25 | 1 | 1298 | |
| EDNRB | - | -1 | 1322 | |
| CBX4 | - | - | 1341 | |
| PCGF2 | - | - | 1393 | |
| HDAC2 | - | - | 1413 | |
| MEIS2 | - | - | 1420 | |
| ISL1 | - | - | 1441 | |
| NFIX | - | - | 1483 | |
| PRRX1 | - | - | 1491 | |
| JARID2 | - | - | 1504 | |
| SMAD3 | - | - | 1541 | |
| AES | - | - | 1548 | |
| DR1 | - | - | 1642 | |
| SIRT1 | - | - | 1656 | |
| NR0B1 | - | -1 | 1715 | |
| ID2 | - | - | 1719 | |
| YY1 | - | - | 1729 | |
| LEF1 | - | - | 1731 | |
| ZBTB7A | - | - | 1762 | |
| NR1D1 | - | - | 1801 | |
| NCOR1 | - | - | 1807 | |
| STRAP | - | - | 1862 | |
| SUZ12 | - | - | 1913 | |
| SOX6 | - | - | 1939 | |
| PSMD10 | - | - | 2012 | |
| SOX3 | - | - | 2042 | |
| UBE2I | - | - | 2101 | |
| MXD4 | - | - | 2116 | |
| SHOX2 | - | - | 2149 | |
| BMI1 | - | - | 2175 | |
| NODAL | - | -1 | 2184 | |
| CBX6 | - | - | 2198 | |
| FOXD3 | - | - | 2272 | |
| FOXA1 | - | - | 2277 | |
| STRN3 | - | - | 2292 | |
| HIPK2 | - | - | 2306 | |
| MSX1 | - | -1 | 2365 | |
| DLX1 | 0.25 | 1 | 2366 | |
| TBL1X | 0.25 | 1 | 2388 | |
| BCOR | - | -1 | 2451 | |
| TFAP2A | - | -1 | 2460 | |
| NKX2-1 | - | - | 2488 | |
| POU3F3 | - | - | 2495 | |
| MYB | - | - | 2519 | |
| FGFR1 | - | - | 2550 | |
| JDP2 | - | - | 2583 | |
| CDX2 | - | - | 2595 | |
| STAT3 | - | -1 | 2598 | |
| MTDH | - | - | 2631 | |
| WHSC1 | - | - | 2663 | |
| ZEB1 | - | -1 | 2672 | |
| HDAC5 | - | - | 2683 | |
| NR6A1 | - | - | 2693 | |
| ZHX2 | - | - | 2748 | |
| DRD3 | 0.25 | 1 | 2757 | |
| HAND1 | - | - | 2763 | |
| HOXC8 | - | - | 2815 | |
| SIM2 | - | - | 2848 | |
| NR1H4 | - | - | 2888 | |
| MXI1 | - | -1 | 2895 | |
| CRYM | - | - | 2922 | |
| FOXO3 | - | - | 2950 | |
| ALX1 | - | - | 2966 | |
| SUPT5H | - | - | 3001 | |
| NRIP2 | - | - | 3026 | |
| PHF21A | - | - | 3042 | |
| WT1 | - | -1 | 3046 | |
| USP2 | - | - | 3058 | |
| ZMYND8 | - | - | 3118 | |
| NKX6-1 | - | - | 3174 | |
| HSF4 | - | - | 3183 | |
| NCOR2 | - | - | 3200 | |
| GATA3 | - | - | 3207 | |
| FOXE1 | - | -1 | 3384 | |
| KLF10 | - | - | 3421 | |
| PIAS1 | - | - | 3424 | |
| CITED2 | - | - | 3457 | |
| EGR1 | - | - | 3527 | |
| HEY2 | - | - | 3529 | |
| SUPT4H1 | - | - | 3593 | |
| DAB2IP | - | - | 3635 | |
| BMP2 | - | -1 | 3686 | |
| JAZF1 | - | - | 3744 | |
| HOXA2 | - | - | 3750 | |
| HDAC9 | - | - | 3770 | |
| SOX14 | - | - | 3810 | |
| RBBP7 | - | - | 3839 | |
| PRDM1 | - | - | 3852 | |
| RCOR1 | - | - | 3860 | |
| PAX5 | - | - | 3863 | |
| MAEL | - | - | 3903 | |
| EID1 | - | - | 3920 | |
| BCL6 | - | - | 3994 | |
| HES5 | - | - | 4001 | |
| SKIL | - | - | 4016 | |
| HOPX | - | - | 4054 | |
| HOXA7 | - | - | 4063 | |
| CDX4 | - | - | 4130 | |
| TCF25 | - | - | 4201 | |
| SKI | - | - | 4231 | |
| ZBTB10 | - | - | 4296 | |
| HSBP1 | - | - | 4317 | |
| CBX8 | - | - | 4367 | |
| EPC1 | - | - | 4520 | |
| EHMT2 | - | - | 4560 | |
| NR2F2 | - | - | 4609 | |
| KAT5 | - | - | 4613 | |
| CDKN1C | - | -1 | 4821 | |
| CUX1 | - | - | 4853 | |
| ZNF136 | - | - | 4857 | |
| MBD2 | - | - | 4876 | |
| ZNF157 | - | - | 4903 | |
| CIITA | - | -1 | 5009 | |
| TCF21 | - | - | 5065 | |
| PIAS4 | - | - | 5148 | |
| BMP4 | - | -1 | 5180 | |
| FOXJ1 | - | - | 5202 | |
| IFNG | - | -1 | 5255 | |
| LPIN1 | - | - | 5282 | |
| GLIS1 | - | - | 5283 | |
| HDAC1 | - | - | 5284 | |
| KCNIP3 | - | - | 5329 | |
| TFAP2C | - | - | 5332 | |
| SIN3A | - | - | 5383 | |
| NKX6-2 | - | - | 5422 | |
| NKX2-5 | 0.25 | 1 | 5490 | |
| TBX22 | - | - | 5562 | |
| MDM2 | - | - | 5588 | |
| GLIS3 | - | - | 5656 | |
| HES1 | 0.25 | 1 | 5662 | |
| TCF7L2 | - | -1 | 5670 | |
| GLI2 | - | -1 | 5731 | |
| PPARA | - | - | 5743 | |
| PRDM16 | - | - | 5921 | |
| DNMT1 | - | - | 5985 | |
| RARA | 0.25 | 1 | 6024 | |
| MEF2A | - | - | 6060 | |
| BARX2 | - | - | 6105 | |
| TWIST1 | - | -1 | 6128 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| CTNNBIP1 | - | - | 6252 | |
| FOXP3 | - | -1 | 6270 | |
| MTA2 | - | - | 6450 | |
| TBX2 | - | - | 6701 | |
| MEN1 | - | -1 | 6723 | |
| NPAS1 | - | - | 6761 | |
| TGIF1 | - | -1 | 6785 | |
| HES7 | - | -1 | 6789 | |
| GLIS2 | - | -1 | 6865 | |
| DKK1 | - | - | 6892 | |
| SOX15 | - | - | 6897 | |
| TBX18 | - | - | 7034 | |
| CBX2 | - | -1 | 7190 | |
| DNMT3A | - | - | 7261 | |
| ZNF177 | - | - | 7350 | |
| CBX7 | - | - | 7355 | |
| FOSB | 0.25 | 1 | 7438 | |
| GFI1 | - | -1 | 7699 | |
| KLF11 | - | -1 | 7734 | |
| FST | - | - | 8021 | |
| GSC | - | - | 8075 | |
| SMYD2 | - | - | 8088 | |
| HMGB1 | 0.25 | 1 | 8141 | |
| HEXIM1 | - | - | 8261 | |
| ID1 | - | - | 8270 | |
| FOXC2 | - | - | 8308 | |
| PDX1 | - | -1 | 8378 | |
| SNAI1 | - | - | 8474 | |
| RNF2 | - | - | 8552 | |
| KDM2B | - | - | 8663 | |
| ASCL2 | - | - | 8695 | |
| HOXB4 | - | - | 8992 | |
| GLI3 | - | -1 | 9032 | |
| SALL4 | - | - | 9465 | |
| TCEAL1 | - | - | 9482 | |
| ZBTB14 | - | - | 9486 | |
| EDN1 | - | - | 9566 | |
| PPARD | - | - | 9856 | |
| SUFU | - | -1 | 9989 | |
| ZNF189 | - | - | 10048 | |
| MLXIPL | - | - | 10379 | |
| IRF2 | - | - | 10385 | |
| VHL | - | -1 | 10426 | |
| GZF1 | - | - | 10434 | |
| ZFHX3 | - | -1 | 10438 | |
| ZNF345 | - | - | 10476 | |
| HELT | - | - | 10624 | |
| ATF7IP | - | - | 10687 | |
| ZFP57 | - | - | 10716 | |
| IGHMBP2 | - | - | 10829 | |
| SCGB1A1 | - | - | 10925 | |
| SLA2 | - | - | 10935 | |
| RARG | 0.25 | 1 | 10956 | |
| TAF7 | - | - | 11048 | |
| S100A1 | - | - | 11072 | |
| CEBPA | - | -1 | 11468 | |
| RPS14 | - | - | 11481 | |
| TAF3 | - | - | 11533 | |
| FOXH1 | - | - | 11747 | |
| ZNF254 | - | - | 11772 | |
| MDFI | - | - | 11799 | |
| E2F6 | - | - | 11933 | |
| WWP2 | - | - | 12103 | |
| FOXP4 | - | - | 12411 | |
| HHEX | - | - | 12438 | |
| ZGLP1 | - | - | 12957 | |
| ZNF202 | - | - | 12990 | |
| SKOR2 | - | - | 13004 | |
| REST | - | - | 13067 | |
| SIK1 | - | - | 13156 | |
| GATA6 | - | -1 | 13349 | |
| LEP | 0.25 | 1 | 13368 | |
| E2F1 | - | - | 13572 | |
| LCOR | - | - | 13656 | |
| BCL6B | - | - | 13868 | |
| HDAC10 | - | - | 13958 | |
| RLIM | - | - | 14091 | |
| ZNF496 | - | - | 14139 | |
| TFCP2L1 | - | - | 14235 | |
| VPS72 | - | - | 14399 | |
| NR0B2 | - | -1 | 14446 | |
| SORBS3 | - | - | 14540 | |
| TWIST2 | - | - | 14594 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| ZBTB32 | - | - | 14839 | |
| TRAF6 | - | - | 14847 | |
| ZNF675 | - | - | 15034 | |
| TRIM27 | - | - | 15044 | |
| RXRA | 0.25 | 1 | 15046 | |
| YEATS2 | - | - | 15878 | |
| TP73 | - | - | 15964 | |
| KDM1A | - | - | 15967 | |
| SKOR1 | - | - | 16408 | |
| MYPOP | - | - | 16526 | |
| SREBF1 | - | - | 16874 | |
| RFX5 | - | -1 | 17573 | |
| ENG | - | -1 | 17647 | |
| SAP30 | - | - | 17818 | |
| OSR2 | - | - | 18904 | |
| GFI1B | - | - | 19254 | |
| HDAC3 | - | - | 19605 | |
| TNF | 0.25 | 1 | 19823 | |
| AJUBA | - | - | 19840 | |
| ID3 | - | - | 20004 | |
| PKIG | - | - | 20074 | |
| VDR | - | - | 20212 | |
| NFKB1 | - | - | 20216 | |
| GPS2 | - | - | 20293 | |
| PAWR | - | - | 20351 | |
| HDAC7 | - | - | 20410 | |
| HEXIM2 | - | - | 20619 | |
| IRF8 | - | - | 20721 | |
| HDAC8 | - | - | 20762 | |
| NR2F6 | - | - | 20967 | |
| LMCD1 | - | - | 20987 | |
| SPI1 | - | - | 20993 | |
| MDM4 | - | - | 21248 | |
| TAF9B | - | - | 21603 | |
| NEDD4 | 0.25 | 1 | 21604 | |
| EFNA1 | - | - | 21813 | |
| PPARG | - | -1 | 21945 | |
| TP53 | 0.25 | 1 | 21968 | |
| NFIC | - | - | 22115 | |
| EHMT1 | 0.5 | 1 | 22250 | |
| CALR | - | - | 22356 | |
| YBX3 | - | - | 22368 | |
| ZNF593 | - | - | 22588 | |
| SETD8 | - | - | 22651 | |
| ZNF174 | - | - | 22688 | |
| SP100 | - | - | 22701 | |
| RBL1 | - | - | 22770 | |
| WWTR1 | - | - | 22777 | |
| SNAI2 | - | -1 | 22934 | |
| NFX1 | - | - | 23105 | |
| NSD1 | 0.25 | 1 | 23293 | |
| PHB | - | -1 | 23909 | |
| SPDEF | - | - | 23955 | |
| TP63 | - | -1 | 24113 | |
| MOSPD1 | - | - | 24340 | |
| MBD3 | 0.25 | 1 | 24699 | |
| CAV1 | - | -1 | 24767 | |
| ORC2 | - | - | 24776 | |
| NR1H3 | - | - | 24805 | |
| IRF7 | - | - | 24810 | |
| C12orf52 | - | - | 24985 | |
| FOXM1 | - | - | 25108 | |
| IGBP1 | - | - | 25575 | |
| PRMT5 | - | - | 25630 |
GO:0000122
| Name | Description | External IDs |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| SATB2 | SATB homeobox 2 | Entrez:23314  Ensembl: ENSG00000119042  HPRD: 12178  HGNC: 21637  |
| RYBP | RING1 and YY1 binding protein | Entrez:23429  HGNC: 10480  HPRD: 09607  |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| MECP2 | methyl CpG binding protein 2 (Rett syndrome) | Entrez:4204  HPRD: 02050  Ensembl: ENSG00000169057  HGNC: 6990  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| SATB2 | SATB homeobox 2 | ||||
| RYBP | RING1 and YY1 binding protein | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| MECP2 | methyl CpG binding protein 2 (Rett syndrome) |
| Query gene | Gene | Gene description | Edge score |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| SATB2 | SATB2 | SATB homeobox 2 | |
| RYBP | RYBP | RING1 and YY1 binding protein | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| MECP2 | MECP2 | methyl CpG binding protein 2 (Rett syndrome) |