| Gene | Input weight | Standard | Rank | |
| SATB2 | 0.25 | 1 | 108 | |
| SOX2 | - | -1 | 125 | |
| FGFR2 | - | -1 | 165 | |
| SFRP1 | - | - | 204 | |
| RUNX2 | - | -1 | 209 | |
| FGF9 | - | - | 241 | |
| MEF2C | 0.25 | 1 | 248 | |
| NF1 | 0.25 | 1 | 333 | |
| GABBR1 | 0.25 | 1 | 352 | |
| CDH11 | - | - | 496 | |
| SP3 | - | - | 536 | |
| JUND | - | - | 756 | |
| NAB1 | - | - | 765 | |
| HDAC4 | - | - | 963 | |
| BMP7 | - | - | 987 | |
| JUNB | - | - | 1044 | |
| ACHE | - | - | 1266 | |
| PTHLH | - | -1 | 1269 | |
| STC1 | - | - | 1273 | |
| MSX2 | - | -1 | 1405 | |
| SMAD3 | - | - | 1541 | |
| NAB2 | - | - | 1559 | |
| LEF1 | - | - | 1731 | |
| MAPK8 | - | - | 1764 | |
| ESR1 | 0.25 | 1 | 1914 | |
| CHRDL1 | - | - | 1977 | |
| IGF1 | 0.25 | 1 | 1993 | |
| SHOX2 | - | - | 2149 | |
| GNAS | - | -1 | 2352 | |
| DLX5 | - | - | 2361 | |
| AMBN | - | - | 2369 | |
| COL11A1 | 0.25 | 1 | 2558 | |
| IGFBP5 | - | - | 2665 | |
| EGFR | - | -1 | 2811 | |
| SMAD1 | - | - | 2829 | |
| AMELX | - | -1 | 2925 | |
| DMP1 | - | -1 | 2973 | |
| MN1 | - | -1 | 3052 | |
| PTGS2 | 0.25 | 1 | 3176 | |
| BMP6 | - | - | 3242 | |
| COL2A1 | - | -1 | 3352 | |
| KLF10 | - | - | 3421 | |
| RSPO2 | - | - | 3476 | |
| STATH | - | - | 3528 | |
| BMP2 | - | -1 | 3686 | |
| HOXA2 | - | - | 3750 | |
| EXT1 | 0.25 | 1 | 3907 | |
| BMP5 | - | - | 4051 | |
| CBS | 0.25 | 1 | 4080 | |
| BMP3 | - | - | 4142 | |
| BMP8A | - | - | 4315 | |
| WNT11 | - | - | 4528 | |
| TNFRSF11A | - | -1 | 4672 | |
| CASR | - | - | 4724 | |
| FGF18 | - | - | 4736 | |
| IHH | - | -1 | 4742 | |
| SOX8 | - | - | 4770 | |
| WNT3 | - | - | 4799 | |
| WNT3A | - | - | 4844 | |
| MMP13 | - | -1 | 4872 | |
| WWOX | - | -1 | 5122 | |
| GPC3 | - | -1 | 5153 | |
| BMP4 | - | -1 | 5180 | |
| TGFB3 | - | -1 | 5321 | |
| CYP24A1 | - | - | 5639 | |
| GLI2 | - | -1 | 5731 | |
| SMO | 0.25 | 1 | 5864 | |
| AXIN2 | - | -1 | 5927 | |
| MEF2A | - | - | 6060 | |
| CLEC5A | - | - | 6073 | |
| IGSF10 | - | - | 6080 | |
| NPR2 | - | -1 | 6150 | |
| MYF5 | - | - | 6153 | |
| ATP6V0A4 | - | - | 6347 | |
| SPP1 | - | - | 6377 | |
| MMP8 | - | - | 6413 | |
| GLI1 | - | - | 6597 | |
| MEN1 | - | -1 | 6723 | |
| RIPPLY2 | - | - | 7060 | |
| ALOX15 | - | - | 7076 | |
| NPPC | - | - | 7442 | |
| TNFSF11 | - | -1 | 7511 | |
| IBSP | - | - | 7647 | |
| CHRDL2 | - | - | 7648 | |
| NOG | - | -1 | 7650 | |
| BMP8B | - | - | 7971 | |
| SP7 | - | - | 8240 | |
| FOXC2 | - | - | 8308 | |
| SNAI1 | - | - | 8474 | |
| PDLIM7 | - | - | 8541 | |
| MYOG | - | - | 8556 | |
| COL13A1 | - | - | 9254 | |
| SUCO | - | - | 9453 | |
| ATP6V1B1 | - | - | 9514 | |
| MMP14 | - | - | 9775 | |
| DUOX2 | - | -1 | 9797 | |
| ASPN | - | - | 10001 | |
| ENAM | - | -1 | 10918 | |
| OSTN | - | - | 11307 | |
| KAZALD1 | - | - | 11786 | |
| GDF2 | - | - | 11942 | |
| DSPP | - | -1 | 12361 | |
| SP1 | - | - | 12422 | |
| SORT1 | - | - | 13249 | |
| LEP | 0.25 | 1 | 13368 | |
| TUFT1 | - | - | 13400 | |
| ZBTB40 | - | - | 13641 | |
| PKDCC | - | - | 13669 | |
| CYP27B1 | - | - | 13801 | |
| FBXL15 | - | - | 14570 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| TRAF6 | - | - | 14847 | |
| FOXS1 | - | - | 15328 | |
| SHH | - | -1 | 15942 | |
| OSTF1 | - | - | 16051 | |
| PPARGC1B | - | -1 | 16411 | |
| LRP5 | - | -1 | 16985 | |
| CYR61 | - | - | 19764 | |
| EIF2AK3 | - | - | 20407 | |
| ASGR2 | - | - | 20715 | |
| ERCC2 | - | -1 | 20724 | |
| SBDS | - | - | 21855 | |
| BGLAP | - | - | 21911 | |
| FZD1 | - | - | 22086 | |
| WWTR1 | - | - | 22777 | |
| IL18 | - | - | 22799 | |
| FOXC1 | - | -1 | 22868 | |
| SNAI2 | - | -1 | 22934 | |
| MGP | - | - | 22959 | |
| IGF2 | 0.25 | 1 | 23391 | |
| CTSK | - | - | 23467 | |
| MINPP1 | - | -1 | 23473 | |
| ECM1 | - | -1 | 23510 | |
| FIGNL1 | 0.25 | 1 | 23562 | |
| MMP9 | - | - | 23766 | |
| THBS3 | - | - | 24201 | |
| SLC26A2 | - | -1 | 24416 | |
| SPARC | - | - | 24433 | |
| EXT2 | - | -1 | 24541 | |
| COL1A1 | - | -1 | 24560 | |
| FSTL3 | - | - | 24700 | |
| IMPAD1 | - | - | 24769 | |
| MMP2 | - | - | 24926 | |
| BMP1 | - | - | 25016 | |
| TWSG1 | - | - | 25171 | |
| PEX7 | 0.25 | 1 | 25180 |
GO:0001503
| Name | Description | External IDs |
| SATB2 | SATB homeobox 2 | Entrez:23314 Ensembl: ENSG00000119042 HPRD: 12178 HGNC: 21637 |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657 HGNC: 11195 HPRD: 08921 Ensembl: ENSG00000181449 |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422 HPRD: 09165 Ensembl: ENSG00000104332 HGNC: 10776 |
| RUNX2 | runt-related transcription factor 2 | Entrez:860 Ensembl: ENSG00000124813 HGNC: 10472 HPRD: 02566 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SATB2 | SATB homeobox 2 | ||||
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| RUNX2 | runt-related transcription factor 2 |
| Query gene | Gene | Gene description | Edge score |
| SATB2 | SATB2 | SATB homeobox 2 | |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| RUNX2 | RUNX2 | runt-related transcription factor 2 |