| Gene | Input weight | Standard | Rank | |
| NTRK3 | 0.25 | 1 | 4 | |
| PPP2CA | - | - | 21 | |
| SLIT1 | - | - | 33 | |
| BCL11A | - | - | 44 | |
| SOX11 | - | - | 66 | |
| ARHGDIA | - | - | 76 | |
| SOX2 | - | -1 | 125 | |
| SEMA4F | - | - | 179 | |
| SFRP1 | - | - | 204 | |
| ASCL1 | - | - | 229 | |
| RARB | 0.25 | 1 | 325 | |
| NF1 | 0.25 | 1 | 333 | |
| PAX6 | 0.25 | 1 | 355 | |
| OLIG2 | - | - | 420 | |
| CNTN2 | - | - | 438 | |
| CALCA | - | - | 460 | |
| FOXG1 | - | - | 483 | |
| SOCS5 | - | - | 489 | |
| OMG | 0.25 | 1 | 521 | |
| ZNF536 | - | - | 527 | |
| APC | 0.25 | 1 | 528 | |
| TRIB2 | - | - | 534 | |
| SOX4 | - | - | 581 | |
| PTBP1 | - | - | 583 | |
| TTC3 | - | - | 627 | |
| CHRD | - | - | 697 | |
| NR2E1 | 0.25 | 1 | 699 | |
| BDNF | 0.25 | 1 | 754 | |
| NKX2-2 | - | - | 771 | |
| LRP6 | - | - | 778 | |
| DLL3 | - | -1 | 816 | |
| DICER1 | - | -1 | 834 | |
| HDAC4 | - | - | 963 | |
| RHOA | - | - | 973 | |
| MAPK1 | - | - | 985 | |
| BMP7 | - | - | 987 | |
| THY1 | - | - | 993 | |
| ZFPM2 | - | -1 | 1023 | |
| WNT10B | - | - | 1030 | |
| RUNX1 | - | -1 | 1041 | |
| SOX9 | - | -1 | 1045 | |
| LDB2 | - | - | 1061 | |
| YWHAH | - | - | 1109 | |
| ID4 | - | - | 1171 | |
| CARTPT | 0.25 | 1 | 1181 | |
| DCC | - | - | 1193 | |
| DLX2 | 0.25 | 1 | 1235 | |
| PTHLH | - | -1 | 1269 | |
| TSPO | 0.25 | 1 | 1277 | |
| SMAD7 | - | - | 1283 | |
| PHOX2B | - | - | 1326 | |
| GPR98 | - | -1 | 1335 | |
| NME2 | - | - | 1434 | |
| INSIG1 | - | - | 1440 | |
| ISL1 | - | - | 1441 | |
| ULK1 | - | - | 1530 | |
| SMAD3 | - | - | 1541 | |
| ZCCHC11 | - | - | 1620 | |
| FGFR3 | - | -1 | 1648 | |
| SIRT1 | - | - | 1656 | |
| NR0B1 | - | -1 | 1715 | |
| ID2 | - | - | 1719 | |
| TBX5 | - | - | 1743 | |
| RTN4 | - | - | 1776 | |
| FOXA2 | - | - | 1835 | |
| CITED1 | - | - | 1867 | |
| TTPA | - | - | 1875 | |
| SUZ12 | - | - | 1913 | |
| RUFY3 | - | - | 1922 | |
| VANGL2 | - | - | 1957 | |
| NRP1 | - | - | 1961 | |
| MT3 | - | - | 1972 | |
| APP | - | - | 1991 | |
| IGF1 | 0.25 | 1 | 1993 | |
| XYLT1 | - | -1 | 2006 | |
| CNTN4 | 1.0 | 1 | 2038 | |
| SOX3 | - | - | 2042 | |
| NKX3-2 | - | - | 2048 | |
| BMPR1A | - | - | 2059 | |
| SEMA3A | - | - | 2076 | |
| SOX21 | - | - | 2110 | |
| DLL1 | - | - | 2143 | |
| NODAL | - | -1 | 2184 | |
| CDK6 | - | - | 2224 | |
| MBP | - | - | 2234 | |
| GSK3A | - | - | 2346 | |
| DLX1 | 0.25 | 1 | 2366 | |
| ZFP36 | - | - | 2405 | |
| CIT | - | - | 2426 | |
| NKX2-1 | - | - | 2488 | |
| WNT8B | - | - | 2506 | |
| FGFR1 | - | - | 2550 | |
| TOB2 | - | - | 2577 | |
| JAG1 | - | -1 | 2588 | |
| CDX2 | - | - | 2595 | |
| HDAC5 | - | - | 2683 | |
| ABCA1 | - | -1 | 2698 | |
| GATA2 | - | -1 | 2710 | |
| FZD7 | - | - | 2714 | |
| ZHX2 | - | - | 2748 | |
| DRD3 | 0.25 | 1 | 2757 | |
| TNR | - | - | 2784 | |
| WNT5A | - | - | 2870 | |
| FGF23 | - | -1 | 2939 | |
| KLF4 | - | - | 3003 | |
| LRRC17 | - | - | 3094 | |
| MIB1 | - | - | 3110 | |
| NKX6-1 | - | - | 3174 | |
| GATA3 | - | - | 3207 | |
| IFNB1 | - | - | 3220 | |
| INHA | - | - | 3229 | |
| PIWIL2 | - | - | 3262 | |
| WNT1 | - | - | 3263 | |
| SLC6A4 | 0.25 | 1 | 3328 | |
| GDF11 | - | - | 3345 | |
| NOTCH1 | - | -1 | 3360 | |
| KLF10 | - | - | 3421 | |
| PRMT1 | - | - | 3538 | |
| NGFR | 0.25 | 1 | 3554 | |
| PCM1 | - | -1 | 3562 | |
| DAB2IP | - | - | 3635 | |
| ESRRB | 0.25 | 1 | 3688 | |
| HOXA2 | - | - | 3750 | |
| SFRP2 | - | - | 3758 | |
| TLX2 | - | - | 3823 | |
| TBX3 | - | - | 3843 | |
| MAG | - | - | 3851 | |
| STAT5B | - | - | 3888 | |
| RC3H1 | - | - | 3931 | |
| FLT3 | - | -1 | 3966 | |
| ZBTB16 | - | - | 3976 | |
| USH2A | - | -1 | 3984 | |
| BCL6 | - | - | 3994 | |
| HES5 | - | - | 4001 | |
| SKIL | - | - | 4016 | |
| HOPX | - | - | 4054 | |
| HOXA7 | - | - | 4063 | |
| SKI | - | - | 4231 | |
| DYNLT1 | - | - | 4275 | |
| CETP | - | - | 4312 | |
| FGF10 | - | -1 | 4373 | |
| ITGB1 | - | - | 4390 | |
| ITGB3 | 0.5 | 1 | 4442 | |
| DIXDC1 | - | - | 4469 | |
| IL6 | - | -1 | 4578 | |
| RNF6 | - | -1 | 4587 | |
| IL4 | - | - | 4723 | |
| NANOG | - | - | 4730 | |
| IHH | - | -1 | 4742 | |
| SOX8 | - | - | 4770 | |
| WNT3 | - | - | 4799 | |
| FGF4 | - | - | 4827 | |
| CRP | - | - | 4831 | |
| ADIPOQ | 0.25 | 1 | 4834 | |
| WNT3A | - | - | 4844 | |
| HIST1H4F | - | - | 4902 | |
| DTX1 | - | - | 5135 | |
| BMP4 | - | -1 | 5180 | |
| FOXJ1 | - | - | 5202 | |
| IFNG | - | -1 | 5255 | |
| NTN1 | - | - | 5275 | |
| LBX1 | - | - | 5371 | |
| NKX6-2 | - | - | 5422 | |
| NKX2-5 | 0.25 | 1 | 5490 | |
| LMX1A | - | - | 5502 | |
| NME1 | - | -1 | 5563 | |
| TLX3 | - | - | 5583 | |
| HES1 | 0.25 | 1 | 5662 | |
| ENPP1 | - | -1 | 5674 | |
| TET1 | - | - | 5732 | |
| PPARA | - | - | 5743 | |
| IFNA2 | - | - | 5752 | |
| PRDM16 | - | - | 5921 | |
| AXIN2 | - | -1 | 5927 | |
| THOC5 | - | - | 6015 | |
| RARA | 0.25 | 1 | 6024 | |
| TGFBR1 | - | -1 | 6027 | |
| TNFSF4 | - | - | 6034 | |
| NFKBIA | - | - | 6067 | |
| TWIST1 | - | -1 | 6128 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| LINGO1 | - | - | 6233 | |
| WNT7A | - | - | 6375 | |
| SPP1 | - | - | 6377 | |
| RTN4R | - | - | 6379 | |
| HIST1H4B | - | - | 6463 | |
| NR1H2 | - | - | 6604 | |
| CTLA4 | - | - | 6709 | |
| SIX2 | - | - | 6713 | |
| MEN1 | - | -1 | 6723 | |
| VAX1 | - | - | 6999 | |
| HOXA5 | - | - | 7014 | |
| NANOS2 | - | - | 7244 | |
| TLR4 | - | -1 | 7283 | |
| LIN28A | - | - | 7324 | |
| GPR55 | - | - | 7357 | |
| NOG | - | -1 | 7650 | |
| MAFB | - | - | 7672 | |
| FST | - | - | 8021 | |
| PRAME | - | - | 8174 | |
| ID1 | - | - | 8270 | |
| IFNL1 | - | - | 8380 | |
| SNAI1 | - | - | 8474 | |
| EREG | - | - | 8504 | |
| IRX3 | - | - | 8539 | |
| ASCL2 | - | - | 8695 | |
| TGFBR3 | - | - | 8717 | |
| TRPV1 | 0.25 | 1 | 8765 | |
| HIST1H4C | - | - | 8810 | |
| PRDX2 | - | - | 8945 | |
| HIST1H4L | - | - | 9008 | |
| GLI3 | - | -1 | 9032 | |
| JAK3 | - | - | 9292 | |
| HIST1H4E | - | - | 9376 | |
| FRZB | - | - | 9553 | |
| RCAN1 | - | - | 9640 | |
| HIST1H4A | - | - | 9720 | |
| INHBA | - | - | 9731 | |
| NOTCH2 | - | -1 | 9863 | |
| RHOC | - | - | 9929 | |
| RBM15 | - | - | 10015 | |
| HIST4H4 | - | - | 10081 | |
| MBNL3 | - | - | 10153 | |
| HOOK3 | - | - | 10195 | |
| HIST1H4I | - | - | 10206 | |
| FOXO4 | - | - | 10242 | |
| F2 | - | -1 | 10327 | |
| ZFHX3 | - | -1 | 10438 | |
| UCMA | - | - | 10818 | |
| AXIN1 | - | -1 | 10905 | |
| ZNF358 | - | - | 10936 | |
| MESP1 | - | - | 10948 | |
| RARG | 0.25 | 1 | 10956 | |
| PTK2 | 0.25 | 1 | 11177 | |
| OSTN | - | - | 11307 | |
| NMRK2 | - | - | 11469 | |
| HIST1H4D | - | - | 11522 | |
| C1QC | - | - | 11561 | |
| CTNNA1 | - | - | 11705 | |
| HIST1H4H | - | - | 11763 | |
| SOD2 | - | - | 12001 | |
| NOTCH4 | - | - | 12179 | |
| HIST1H4K | - | - | 12218 | |
| PF4 | - | - | 12421 | |
| JUP | - | -1 | 12627 | |
| NFKBID | - | - | 12661 | |
| FOXO6 | - | - | 12694 | |
| RYK | - | - | 12768 | |
| HIST2H4B | - | - | 12893 | |
| REST | - | - | 13067 | |
| LRRK2 | - | -1 | 13335 | |
| OVOL2 | - | - | 13406 | |
| WEE2 | - | - | 13548 | |
| TCF7L1 | - | - | 13850 | |
| NPHP3 | - | -1 | 14055 | |
| WNT9A | - | - | 14123 | |
| LDB1 | - | - | 14274 | |
| LMO2 | - | - | 14372 | |
| VPS72 | - | - | 14399 | |
| TWIST2 | - | - | 14594 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| ZNF675 | - | - | 15034 | |
| NRARP | - | - | 15165 | |
| LIG4 | - | -1 | 15324 | |
| IL4R | - | - | 15546 | |
| PRDM6 | - | - | 15834 | |
| SHH | - | -1 | 15942 | |
| TP73 | - | - | 15964 | |
| TRIB3 | - | - | 16821 | |
| LRP5 | - | -1 | 16985 | |
| ABCG1 | - | - | 17188 | |
| STAT5A | - | - | 19316 | |
| TNF | 0.25 | 1 | 19823 | |
| CCDC85B | - | - | 19925 | |
| ABCA5 | - | - | 19940 | |
| ID3 | - | - | 20004 | |
| PSEN1 | - | - | 20241 | |
| TLR3 | - | - | 20315 | |
| HDAC7 | - | - | 20410 | |
| RIF1 | - | - | 20515 | |
| LIF | - | - | 20888 | |
| TCL1A | - | - | 21083 | |
| POU5F1 | - | - | 21422 | |
| HIST1H4J | - | - | 21610 | |
| NBN | - | -1 | 21778 | |
| PRPF19 | - | - | 21797 | |
| EFNA1 | - | - | 21813 | |
| WNT4 | - | - | 21840 | |
| PPARG | - | -1 | 21945 | |
| KLK8 | - | - | 22103 | |
| TRIM11 | - | - | 22145 | |
| CALR | - | - | 22356 | |
| HIST2H4A | - | - | 22387 | |
| C14orf169 | - | - | 22418 | |
| CD74 | - | - | 22633 | |
| TGFB1I1 | - | - | 22730 | |
| NOTCH3 | - | - | 22751 | |
| WWTR1 | - | - | 22777 | |
| YAP1 | - | - | 22816 | |
| SNAI2 | - | -1 | 22934 | |
| INPP5D | - | - | 23241 | |
| RNF10 | - | - | 23821 | |
| CTDSP1 | - | - | 23825 | |
| ATF5 | - | - | 23952 | |
| SPDEF | - | - | 23955 | |
| TP63 | - | -1 | 24113 | |
| ARHGEF1 | - | - | 24198 | |
| EFEMP1 | - | - | 24649 | |
| FSTL3 | - | - | 24700 | |
| CAV1 | - | -1 | 24767 | |
| NR1H3 | - | - | 24805 | |
| NME1-NME2 | - | - | 24831 | |
| NBR1 | - | - | 24836 | |
| ZC3H8 | - | - | 24841 | |
| TWSG1 | - | - | 25171 | |
| IQCB1 | - | -1 | 25265 | |
| ITGAV | - | - | 25348 | |
| ASPM | - | -1 | 25468 | |
| TPT1 | - | - | 25664 |
GO:0045596
| Name | Description | External IDs |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | Entrez:4916  Ensembl: ENSG00000140538  HPRD: 01870  HGNC: 8033  |
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | Entrez:5515  HGNC: 9299  HPRD: 08912  |
| SLIT1 | slit homolog 1 (Drosophila) | Entrez:6585  Ensembl: ENSG00000187122  HGNC: 11085  HPRD: 04773  |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | Entrez:53335  Ensembl: ENSG00000119866  HGNC: 13221  HPRD: 05949  |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | ||||
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | ||||
| SLIT1 | slit homolog 1 (Drosophila) | ||||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | ||||
| SOX11 | SRY (sex determining region Y)-box 11 |
| Query gene | Gene | Gene description | Edge score |
| NTRK3 | NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | |
| PPP2CA | PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | |
| SLIT1 | SLIT1 | slit homolog 1 (Drosophila) | |
| BCL11A | BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 |