| Gene | Input weight | Standard | Rank | |
| SOX2 | - | -1 | 125 | |
| SFRP1 | - | - | 204 | |
| NF1 | 0.25 | 1 | 333 | |
| PAX6 | 0.25 | 1 | 355 | |
| FBXW7 | - | - | 525 | |
| APC | 0.25 | 1 | 528 | |
| TGFB2 | - | - | 625 | |
| LRP6 | - | - | 778 | |
| SCG2 | - | - | 849 | |
| WNT10B | - | - | 1030 | |
| SOX9 | - | -1 | 1045 | |
| CDKN1B | - | - | 1067 | |
| PTCH1 | - | -1 | 1149 | |
| AR | 0.25 | 1 | 1499 | |
| FGFR3 | - | -1 | 1648 | |
| LECT1 | - | - | 1837 | |
| ROBO1 | - | - | 1888 | |
| VASH1 | 0.25 | 1 | 2133 | |
| WFDC1 | - | - | 2183 | |
| CDK6 | - | - | 2224 | |
| PTEN | 1.0 | 1 | 2260 | |
| NKX3-1 | - | - | 2779 | |
| MCC | - | - | 2843 | |
| WNT5A | - | - | 2870 | |
| GATA3 | - | - | 3207 | |
| PTPRM | - | - | 3512 | |
| DAB2IP | - | - | 3635 | |
| SFRP2 | - | - | 3758 | |
| MAGED1 | - | - | 4429 | |
| NR2F2 | - | - | 4609 | |
| CDKN1C | - | -1 | 4821 | |
| GPC3 | - | -1 | 5153 | |
| BMP4 | - | -1 | 5180 | |
| TNMD | - | - | 5719 | |
| GAS1 | - | - | 5960 | |
| RUNX3 | - | - | 6065 | |
| EREG | - | - | 8504 | |
| TGFBR3 | - | - | 8717 | |
| NKX2-8 | - | - | 9313 | |
| GHRL | 0.25 | 1 | 9333 | |
| CDKN2A | - | -1 | 9650 | |
| PPARD | - | - | 9856 | |
| IL26 | - | - | 10272 | |
| DLG1 | - | - | 10557 | |
| APOH | - | - | 11155 | |
| STK11 | - | -1 | 11332 | |
| TSC2 | 0.25 | 1 | 11448 | |
| AIMP1 | - | - | 11667 | |
| GDF2 | - | - | 11942 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| KRT4 | - | -1 | 14758 | |
| CDKN2B | - | - | 15696 | |
| ENG | - | -1 | 17647 | |
| EAF2 | - | - | 20328 | |
| KRIT1 | - | - | 20970 | |
| APOE | 0.25 | 1 | 21310 | |
| THBS1 | - | - | 21993 | |
| ATPIF1 | - | - | 22467 | |
| ATP5A1 | - | - | 23186 | |
| SAV1 | - | - | 23234 | |
| CAV2 | - | - | 23834 | |
| TINF2 | - | - | 24064 | |
| SERPINF1 | - | - | 24149 | |
| CAV1 | - | -1 | 24767 | |
| BRCA2 | - | -1 | 24829 |
GO:0050680
| Name | Description | External IDs |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657 HGNC: 11195 HPRD: 08921 Ensembl: ENSG00000181449 |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422 HPRD: 09165 Ensembl: ENSG00000104332 HGNC: 10776 |
| NF1 | neurofibromin 1 | Entrez:4763 HGNC: 7765 HPRD: 01203 Ensembl: ENSG00000196712 |
| PAX6 | paired box 6 | Entrez:5080 HPRD: 06167 Ensembl: ENSG00000007372 HGNC: 8620 |
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase | Entrez:55294 HPRD: 05888 Ensembl: ENSG00000109670 HGNC: 16712 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| NF1 | neurofibromin 1 | ||||
| PAX6 | paired box 6 | ||||
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |
| Query gene | Gene | Gene description | Edge score |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| NF1 | NF1 | neurofibromin 1 | |
| PAX6 | PAX6 | paired box 6 | |
| FBXW7 | FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |