| Gene | Input weight | Standard | Rank | |
| SOX2 | - | -1 | 125 | |
| FGFR2 | - | -1 | 165 | |
| SFRP1 | - | - | 204 | |
| FGF9 | - | - | 241 | |
| CDK14 | 0.25 | 1 | 334 | |
| APC | 0.25 | 1 | 528 | |
| SOX4 | - | - | 581 | |
| EDA | - | -1 | 615 | |
| APC2 | - | - | 671 | |
| LRP6 | - | - | 778 | |
| CSNK1D | - | - | 811 | |
| WNT10B | - | - | 1030 | |
| SOX9 | - | -1 | 1045 | |
| WNT2B | - | - | 1126 | |
| CSNK1E | 0.25 | 1 | 1225 | |
| LRP4 | - | - | 1290 | |
| HDAC2 | - | - | 1413 | |
| SMAD3 | - | - | 1541 | |
| AES | - | - | 1548 | |
| UBR5 | - | - | 1553 | |
| FGFR3 | - | -1 | 1648 | |
| LEF1 | - | - | 1731 | |
| WNT2 | 0.25 | 1 | 1783 | |
| TNKS | - | - | 1911 | |
| DKK2 | - | - | 2075 | |
| DLX5 | - | - | 2361 | |
| MCC | - | - | 2843 | |
| WNT5A | - | - | 2870 | |
| ILK | - | - | 2917 | |
| USP34 | - | - | 2985 | |
| LATS1 | - | - | 3031 | |
| RSPO2 | - | - | 3476 | |
| SOX17 | - | - | 3484 | |
| SFRP4 | - | - | 3511 | |
| EGR1 | - | - | 3527 | |
| DAB2IP | - | - | 3635 | |
| SFRP2 | - | - | 3758 | |
| DKK3 | - | - | 4056 | |
| FGF10 | - | -1 | 4373 | |
| DIXDC1 | - | - | 4469 | |
| WNT11 | - | - | 4528 | |
| DRAXIN | - | - | 4545 | |
| SOX7 | - | - | 4709 | |
| WNT3A | - | - | 4844 | |
| SIAH2 | - | - | 4934 | |
| GPC3 | - | -1 | 5153 | |
| PRICKLE1 | - | -1 | 5311 | |
| NKX2-5 | 0.25 | 1 | 5490 | |
| TCF7L2 | - | -1 | 5670 | |
| SOST | - | - | 5795 | |
| RSPO1 | - | - | 5850 | |
| CYLD | - | -1 | 5851 | |
| AXIN2 | - | -1 | 5927 | |
| STK4 | - | - | 6010 | |
| WNT7A | - | - | 6375 | |
| ZNF703 | - | - | 6470 | |
| GLI1 | - | - | 6597 | |
| CTNND1 | - | - | 6834 | |
| DKK1 | - | - | 6892 | |
| TBX18 | - | - | 7034 | |
| BAMBI | - | - | 7548 | |
| TLE2 | - | - | 7919 | |
| CAPRIN2 | - | - | 8066 | |
| GLI3 | - | -1 | 9032 | |
| TNKS2 | - | - | 9062 | |
| FRZB | - | - | 9553 | |
| SFRP5 | - | - | 9913 | |
| AXIN1 | - | -1 | 10905 | |
| MESP1 | - | - | 10948 | |
| KREMEN1 | - | - | 11168 | |
| WNT5B | - | - | 11732 | |
| JUP | - | -1 | 12627 | |
| DDIT3 | - | - | 12944 | |
| NPHP3 | - | -1 | 14055 | |
| CCNY | - | - | 14714 | |
| LATS2 | - | - | 15008 | |
| NRARP | - | - | 15165 | |
| SHH | - | -1 | 15942 | |
| WLS | - | - | 16366 | |
| LRP5 | - | -1 | 16985 | |
| FZD6 | - | - | 19825 | |
| NFKB1 | - | - | 20216 | |
| RNF146 | - | - | 20728 | |
| POU5F1 | - | - | 21422 | |
| WNT4 | - | - | 21840 | |
| TRPM4 | - | - | 21966 | |
| FZD1 | - | - | 22086 | |
| INVS | - | -1 | 22094 | |
| STK3 | - | - | 22605 | |
| WWTR1 | - | - | 22777 | |
| YAP1 | - | - | 22816 | |
| SNAI2 | - | -1 | 22934 | |
| PFDN5 | - | - | 23979 | |
| EMD | - | -1 | 24154 | |
| SCYL2 | - | - | 24230 | |
| COL1A1 | - | -1 | 24560 | |
| CAV1 | - | -1 | 24767 | |
| CBY1 | - | - | 24830 | |
| DAB2 | - | - | 24837 |
GO:0060828
| Name | Description | External IDs |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657  HGNC: 11195  HPRD: 08921  Ensembl: ENSG00000181449  |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263  HPRD: 01492  Ensembl: ENSG00000066468  HGNC: 3689  |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422  HPRD: 09165  Ensembl: ENSG00000104332  HGNC: 10776  |
| FGF9 | fibroblast growth factor 9 | Entrez:2254  HPRD: 02951  HGNC: 3687  Ensembl: ENSG00000102678  |
| CDK14 | cyclin-dependent kinase 14 | Entrez:5218  Ensembl: ENSG00000058091  HGNC: 8883  HPRD: 15121  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| FGF9 | fibroblast growth factor 9 | ||||
| CDK14 | cyclin-dependent kinase 14 |
| Query gene | Gene | Gene description | Edge score |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| FGF9 | FGF9 | fibroblast growth factor 9 | |
| CDK14 | CDK14 | cyclin-dependent kinase 14 |