| Gene | Input weight | Standard | Rank | |
| FGFR2 | - | -1 | 165 | |
| RARB | 0.25 | 1 | 325 | |
| CALB1 | 0.25 | 1 | 342 | |
| RET | - | -1 | 384 | |
| SALL1 | - | - | 408 | |
| PAX2 | - | - | 459 | |
| SLIT2 | - | - | 582 | |
| BDNF | 0.25 | 1 | 754 | |
| PBX1 | - | - | 823 | |
| BMP7 | - | - | 987 | |
| PTCH1 | - | -1 | 1149 | |
| ROBO2 | - | -1 | 1224 | |
| SMAD7 | - | - | 1283 | |
| SMAD3 | - | - | 1541 | |
| CITED1 | - | - | 1867 | |
| LHX1 | - | - | 1926 | |
| SMAD6 | - | - | 2079 | |
| FOXD3 | - | - | 2272 | |
| FGFR1 | - | - | 2550 | |
| WNT6 | - | - | 2891 | |
| ILK | - | - | 2917 | |
| PAX8 | - | -1 | 3021 | |
| WT1 | - | -1 | 3046 | |
| GATA3 | - | - | 3207 | |
| WNT1 | - | - | 3263 | |
| BMPER | - | - | 3267 | |
| GDF11 | - | - | 3345 | |
| SIM1 | - | -1 | 3584 | |
| AGT | - | -1 | 3783 | |
| HOXA11 | - | - | 4215 | |
| SMAD9 | - | -1 | 4245 | |
| TSHZ3 | - | - | 4327 | |
| GDNF | - | -1 | 4462 | |
| WNT11 | - | - | 4528 | |
| CD44 | - | - | 5047 | |
| TCF21 | - | - | 5065 | |
| BMP4 | - | -1 | 5180 | |
| FOXD1 | - | - | 5256 | |
| FOXD2 | - | - | 5493 | |
| HOXD11 | 0.25 | 1 | 5555 | |
| CRLF1 | - | - | 5774 | |
| RARA | 0.25 | 1 | 6024 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| CTNNBIP1 | - | - | 6252 | |
| KIF26B | - | - | 6333 | |
| ARG2 | - | - | 7159 | |
| SMAD2 | - | - | 7224 | |
| FOXD4L1 | - | - | 7290 | |
| PSPN | - | - | 7530 | |
| NOG | - | -1 | 7650 | |
| NPNT | - | - | 7660 | |
| PGF | - | - | 7841 | |
| FOXC2 | - | - | 8308 | |
| HS2ST1 | - | - | 8389 | |
| WNT9B | - | - | 8495 | |
| GLI3 | - | -1 | 9032 | |
| HNF1B | - | -1 | 9562 | |
| FGF2 | - | - | 9627 | |
| FOXD4 | - | - | 9835 | |
| GZF1 | - | - | 10434 | |
| FOXD4L4 | - | - | 10472 | |
| DLG1 | - | - | 10557 | |
| SPRY1 | - | - | 10579 | |
| EPCAM | - | -1 | 11302 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| SDC1 | - | - | 14905 | |
| SIX1 | - | -1 | 15117 | |
| SHH | - | -1 | 15942 | |
| FOXD4L5 | - | - | 16935 | |
| FOXD4L2 | - | - | 17995 | |
| LAMA5 | - | - | 19186 | |
| FOXD4L6 | - | - | 19463 | |
| MYC | - | -1 | 21066 | |
| WNT4 | - | - | 21840 | |
| SDC4 | - | - | 22313 | |
| FOXC1 | - | -1 | 22868 |
GO:0001657
| Name | Description | External IDs |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| RARB | retinoic acid receptor, beta | Entrez:5915 HPRD: 07183 Ensembl: ENSG00000077092 HGNC: 9865 |
| CALB1 | calbindin 1, 28kDa | Entrez:793 Ensembl: ENSG00000104327 HGNC: 1434 HPRD: 00229 |
| RET | ret proto-oncogene | Entrez:5979 HGNC: 9967 Ensembl: ENSG00000165731 HPRD: 01266 |
| SALL1 | sal-like 1 (Drosophila) | Entrez:6299 HGNC: 10524 Ensembl: ENSG00000103449 HPRD: 03742 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| RARB | retinoic acid receptor, beta | ||||
| CALB1 | calbindin 1, 28kDa | ||||
| RET | ret proto-oncogene | ||||
| SALL1 | sal-like 1 (Drosophila) |
| Query gene | Gene | Gene description | Edge score |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| RARB | RARB | retinoic acid receptor, beta | |
| CALB1 | CALB1 | calbindin 1, 28kDa | |
| RET | RET | ret proto-oncogene | |
| SALL1 | SALL1 | sal-like 1 (Drosophila) |