| Gene | Input weight | Standard | Rank | |
| PDGFRA | - | -1 | 233 | |
| NF1 | 0.25 | 1 | 333 | |
| CALB1 | 0.25 | 1 | 342 | |
| BASP1 | - | - | 353 | |
| RET | - | -1 | 384 | |
| SALL1 | - | - | 408 | |
| PAX2 | - | - | 459 | |
| APC | 0.25 | 1 | 528 | |
| NIPBL | - | -1 | 561 | |
| SOX4 | - | - | 581 | |
| SCHIP1 | - | - | 738 | |
| PROX1 | - | - | 962 | |
| BMP7 | - | - | 987 | |
| SOX9 | - | -1 | 1045 | |
| PTCH1 | - | -1 | 1149 | |
| ROBO2 | - | -1 | 1224 | |
| LRP4 | - | - | 1290 | |
| AGTR2 | 0.25 | 1 | 1418 | |
| BAG6 | - | - | 1435 | |
| ID2 | - | - | 1719 | |
| LEF1 | - | - | 1731 | |
| COL4A3 | - | -1 | 1772 | |
| TSC1 | 0.25 | 1 | 1844 | |
| CITED1 | - | - | 1867 | |
| LHX1 | - | - | 1926 | |
| RBP4 | - | - | 2097 | |
| FOXD3 | - | - | 2272 | |
| COL4A4 | - | -1 | 2368 | |
| TFAP2B | - | - | 2409 | |
| TFAP2A | - | -1 | 2460 | |
| POU3F3 | - | - | 2495 | |
| SMAD1 | - | - | 2829 | |
| WNT5A | - | - | 2870 | |
| WNT6 | - | - | 2891 | |
| AGTR1 | - | -1 | 2898 | |
| SMAD4 | - | - | 2927 | |
| PAX8 | - | -1 | 3021 | |
| WT1 | - | -1 | 3046 | |
| FOXF1 | - | -1 | 3053 | |
| ITGA8 | - | - | 3151 | |
| ACVR2B | - | -1 | 3179 | |
| GATA3 | - | - | 3207 | |
| BMP6 | - | - | 3242 | |
| SULF1 | - | - | 3312 | |
| GDF11 | - | - | 3345 | |
| ALDH1A2 | - | - | 3466 | |
| SOX17 | - | - | 3484 | |
| EGR1 | - | - | 3527 | |
| TET2 | - | - | 3597 | |
| PYGO1 | - | - | 3616 | |
| AGT | - | -1 | 3783 | |
| ZBTB16 | - | - | 3976 | |
| TIPARP | - | - | 4069 | |
| TSHZ3 | - | - | 4327 | |
| FGF10 | - | -1 | 4373 | |
| GDNF | - | -1 | 4462 | |
| WNT11 | - | - | 4528 | |
| SIX4 | - | - | 4623 | |
| FGF8 | - | -1 | 4677 | |
| VEGFA | 0.25 | 1 | 4691 | |
| SOX8 | - | - | 4770 | |
| ADIPOQ | 0.25 | 1 | 4834 | |
| TCF21 | - | - | 5065 | |
| GPC3 | - | -1 | 5153 | |
| BMP4 | - | -1 | 5180 | |
| FOXD1 | - | - | 5256 | |
| BCL2L11 | - | - | 5454 | |
| AQP2 | - | - | 5462 | |
| GLI2 | - | -1 | 5731 | |
| IRX2 | - | - | 5779 | |
| SMO | 0.25 | 1 | 5864 | |
| SULF2 | - | - | 5996 | |
| TGFBR1 | - | -1 | 6027 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| KIF26B | - | - | 6333 | |
| REN | - | -1 | 6631 | |
| SIX2 | - | - | 6713 | |
| JMJD6 | - | - | 7161 | |
| STRA6 | - | -1 | 7612 | |
| PLCE1 | - | - | 7692 | |
| WNT7B | - | - | 7693 | |
| TINAG | - | - | 7755 | |
| PCSK9 | - | - | 8260 | |
| FOXC2 | - | - | 8308 | |
| WNT9B | - | - | 8495 | |
| IRX3 | - | - | 8539 | |
| WFS1 | 0.25 | 1 | 8575 | |
| GLI3 | - | -1 | 9032 | |
| PKHD1 | - | -1 | 9162 | |
| ACE | - | - | 9212 | |
| HNF1B | - | -1 | 9562 | |
| RDH10 | - | - | 9600 | |
| AQP11 | - | - | 10019 | |
| UPK3A | - | -1 | 10467 | |
| SPRY1 | - | - | 10579 | |
| HMGCS2 | - | - | 10713 | |
| KCNJ8 | - | - | 10897 | |
| PYGO2 | - | - | 11582 | |
| MPV17 | - | - | 12011 | |
| PCSK5 | - | - | 12160 | |
| PDGFB | - | - | 12484 | |
| APH1A | - | - | 12706 | |
| UMOD | - | -1 | 12939 | |
| LRRK2 | - | -1 | 13335 | |
| ADAMTS1 | - | - | 14693 | |
| SIX1 | - | -1 | 15117 | |
| ALDH1A3 | - | - | 15783 | |
| SHH | - | -1 | 15942 | |
| TP73 | - | - | 15964 | |
| IQCJ-SCHIP1 | - | - | 18546 | |
| OSR2 | - | - | 18904 | |
| RPGRIP1L | - | - | 19545 | |
| ID3 | - | - | 20004 | |
| SGPL1 | - | - | 20483 | |
| CA2 | - | -1 | 20831 | |
| PDGFRB | - | - | 21054 | |
| CEP290 | - | -1 | 21573 | |
| RRM2B | - | - | 21720 | |
| WNT4 | - | - | 21840 | |
| ALDH9A1 | - | - | 21991 | |
| INVS | - | -1 | 22094 | |
| PTCD2 | - | - | 22503 | |
| WWTR1 | - | - | 22777 | |
| NID1 | - | - | 22847 | |
| FOXC1 | - | -1 | 22868 | |
| ASS1 | - | -1 | 23526 | |
| C1GALT1 | - | - | 23761 | |
| TP63 | - | -1 | 24113 | |
| SERPINF1 | - | - | 24149 | |
| FSTL3 | - | - | 24700 | |
| DCN | - | - | 24707 | |
| ACAT1 | - | -1 | 25660 | |
| LAMB2 | - | - | 25761 |
GO:0072001
| Name | Description | External IDs |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide | Entrez:5156 Ensembl: ENSG00000134853 HPRD: 01429 HGNC: 8803 |
| NF1 | neurofibromin 1 | Entrez:4763 HGNC: 7765 HPRD: 01203 Ensembl: ENSG00000196712 |
| CALB1 | calbindin 1, 28kDa | Entrez:793 Ensembl: ENSG00000104327 HGNC: 1434 HPRD: 00229 |
| BASP1 | brain abundant, membrane attached signal protein 1 | Entrez:10409 HGNC: 957 HPRD: 08389 Ensembl: ENSG00000176788 |
| RET | ret proto-oncogene | Entrez:5979 HGNC: 9967 Ensembl: ENSG00000165731 HPRD: 01266 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide | ||||
| NF1 | neurofibromin 1 | ||||
| CALB1 | calbindin 1, 28kDa | ||||
| BASP1 | brain abundant, membrane attached signal protein 1 | ||||
| RET | ret proto-oncogene |
| Query gene | Gene | Gene description | Edge score |
| PDGFRA | PDGFRA | platelet-derived growth factor receptor, alpha polypeptide | |
| NF1 | NF1 | neurofibromin 1 | |
| CALB1 | CALB1 | calbindin 1, 28kDa | |
| BASP1 | BASP1 | brain abundant, membrane attached signal protein 1 | |
| RET | RET | ret proto-oncogene |