| Gene | Input weight | Standard | Rank | |
| SOX11 | - | - | 66 | |
| PFN1 | - | - | 74 | |
| SFRP1 | - | - | 204 | |
| LHX2 | - | - | 362 | |
| RET | - | -1 | 384 | |
| SALL1 | - | - | 408 | |
| PAX2 | - | - | 459 | |
| SOX4 | - | - | 581 | |
| LRP6 | - | - | 778 | |
| SOX9 | - | -1 | 1045 | |
| DLC1 | - | - | 1105 | |
| PTCH1 | - | -1 | 1149 | |
| LMO4 | - | - | 1406 | |
| ZIC2 | - | -1 | 1550 | |
| TSC1 | 0.25 | 1 | 1844 | |
| OPA1 | - | - | 1951 | |
| VANGL2 | - | - | 1957 | |
| ENAH | - | - | 1958 | |
| MAP3K7 | - | - | 2169 | |
| NODAL | - | -1 | 2184 | |
| TFAP2A | - | -1 | 2460 | |
| T | - | - | 2584 | |
| WNT5A | - | - | 2870 | |
| WNT6 | - | - | 2891 | |
| DEAF1 | - | - | 2911 | |
| ALX1 | - | - | 2966 | |
| PAX8 | - | -1 | 3021 | |
| MIB1 | - | - | 3110 | |
| COBL | 0.25 | 1 | 3131 | |
| GATA3 | - | - | 3207 | |
| FZD3 | - | - | 3579 | |
| SFRP2 | - | - | 3758 | |
| SKI | - | - | 4231 | |
| ZEB2 | - | - | 4607 | |
| RGMA | - | - | 4651 | |
| SOX8 | - | - | 4770 | |
| BMP4 | - | -1 | 5180 | |
| CELSR1 | - | - | 5539 | |
| IRX2 | - | - | 5779 | |
| IPMK | - | - | 6074 | |
| IFT122 | - | -1 | 6114 | |
| TWIST1 | - | -1 | 6128 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| TGIF1 | - | -1 | 6785 | |
| GDF7 | - | - | 7494 | |
| VASP | - | - | 8124 | |
| HS2ST1 | - | - | 8389 | |
| WNT9B | - | - | 8495 | |
| IRX3 | - | - | 8539 | |
| TULP3 | - | - | 8569 | |
| KDM2B | - | - | 8663 | |
| SALL4 | - | - | 9465 | |
| HNF1B | - | -1 | 9562 | |
| SUFU | - | -1 | 9989 | |
| BBS4 | - | -1 | 10693 | |
| FUZ | - | - | 10698 | |
| ADM | - | - | 10761 | |
| TSC2 | 0.25 | 1 | 11448 | |
| DVL2 | - | - | 12293 | |
| SIX1 | - | -1 | 15117 | |
| SHH | - | -1 | 15942 | |
| IFT52 | - | - | 16550 | |
| TEAD2 | - | - | 19457 | |
| FZD6 | - | - | 19825 | |
| PTK7 | - | - | 20787 | |
| WNT4 | - | - | 21840 | |
| IFT172 | - | - | 22164 | |
| KAT2A | - | - | 22874 | |
| CASP8 | - | -1 | 22936 | |
| BCL10 | - | -1 | 24165 | |
| LIAS | - | - | 25118 |
GO:0001838
| Name | Description | External IDs |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| PFN1 | profilin 1 | Entrez:5216  Ensembl: ENSG00000108518  HGNC: 8881  HPRD: 01452  |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422  HPRD: 09165  Ensembl: ENSG00000104332  HGNC: 10776  |
| LHX2 | LIM homeobox 2 | Entrez:9355  HPRD: 04786  HGNC: 6594  Ensembl: ENSG00000106689  |
| RET | ret proto-oncogene | Entrez:5979  HGNC: 9967  Ensembl: ENSG00000165731  HPRD: 01266  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| PFN1 | profilin 1 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| LHX2 | LIM homeobox 2 | ||||
| RET | ret proto-oncogene |
| Query gene | Gene | Gene description | Edge score |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| PFN1 | PFN1 | profilin 1 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| LHX2 | LHX2 | LIM homeobox 2 | |
| RET | RET | ret proto-oncogene |