| Gene | Input weight | Standard | Rank | |
| SOX11 | - | - | 66 | |
| PFN1 | - | - | 74 | |
| SFRP1 | - | - | 204 | |
| PLXNA2 | - | - | 235 | |
| NF1 | 0.25 | 1 | 333 | |
| PAX6 | 0.25 | 1 | 355 | |
| LHX2 | - | - | 362 | |
| SALL1 | - | - | 408 | |
| PAX2 | - | - | 459 | |
| SOX4 | - | - | 581 | |
| CHRD | - | - | 697 | |
| LRP6 | - | - | 778 | |
| PROX1 | - | - | 962 | |
| WNT10B | - | - | 1030 | |
| DLC1 | - | - | 1105 | |
| PTCH1 | - | -1 | 1149 | |
| LMO4 | - | - | 1406 | |
| ZIC2 | - | -1 | 1550 | |
| FOXA2 | - | - | 1835 | |
| TSC1 | 0.25 | 1 | 1844 | |
| OPA1 | - | - | 1951 | |
| VANGL2 | - | - | 1957 | |
| ENAH | - | - | 1958 | |
| PAX7 | - | -1 | 2033 | |
| MAP3K7 | - | - | 2169 | |
| BMI1 | - | - | 2175 | |
| NODAL | - | -1 | 2184 | |
| TFAP2A | - | -1 | 2460 | |
| T | - | - | 2584 | |
| WNT5A | - | - | 2870 | |
| DEAF1 | - | - | 2911 | |
| ALX1 | - | - | 2966 | |
| MIB1 | - | - | 3110 | |
| COBL | 0.25 | 1 | 3131 | |
| WNT1 | - | - | 3263 | |
| NOTCH1 | - | -1 | 3360 | |
| ALDH1A2 | - | - | 3466 | |
| FZD3 | - | - | 3579 | |
| GBX2 | - | - | 3588 | |
| SFRP2 | - | - | 3758 | |
| EN1 | - | - | 3999 | |
| HES5 | - | - | 4001 | |
| FOXB1 | - | - | 4202 | |
| SKI | - | - | 4231 | |
| ZEB2 | - | - | 4607 | |
| RGMA | - | - | 4651 | |
| WNT3 | - | - | 4799 | |
| WNT3A | - | - | 4844 | |
| BMP4 | - | -1 | 5180 | |
| C2CD3 | - | - | 5468 | |
| CELSR1 | - | - | 5539 | |
| HES1 | 0.25 | 1 | 5662 | |
| GLI2 | - | -1 | 5731 | |
| SMO | 0.25 | 1 | 5864 | |
| MNX1 | - | - | 5932 | |
| GAS1 | - | - | 5960 | |
| IPMK | - | - | 6074 | |
| IFT122 | - | -1 | 6114 | |
| TWIST1 | - | -1 | 6128 | |
| TGIF1 | - | -1 | 6785 | |
| GDF7 | - | - | 7494 | |
| NOG | - | -1 | 7650 | |
| GSC | - | - | 8075 | |
| VASP | - | - | 8124 | |
| TULP3 | - | - | 8569 | |
| KDM2B | - | - | 8663 | |
| HES3 | - | - | 8916 | |
| GLI3 | - | -1 | 9032 | |
| SALL4 | - | - | 9465 | |
| SUFU | - | -1 | 9989 | |
| BBS4 | - | -1 | 10693 | |
| FUZ | - | - | 10698 | |
| ADM | - | - | 10761 | |
| ZNF358 | - | - | 10936 | |
| TSC2 | 0.25 | 1 | 11448 | |
| FOXH1 | - | - | 11747 | |
| PHGDH | - | -1 | 11898 | |
| DVL2 | - | - | 12293 | |
| AMBRA1 | - | - | 12424 | |
| EPHA2 | - | -1 | 14150 | |
| TCF7 | - | - | 14920 | |
| SHH | - | -1 | 15942 | |
| IFT52 | - | - | 16550 | |
| TEAD2 | - | - | 19457 | |
| RPGRIP1L | - | - | 19545 | |
| FZD6 | - | - | 19825 | |
| PSEN1 | - | - | 20241 | |
| PTK7 | - | - | 20787 | |
| DVL1 | - | - | 21155 | |
| PSEN2 | - | - | 21431 | |
| IFT172 | - | - | 22164 | |
| KAT2A | - | - | 22874 | |
| CASP8 | - | -1 | 22936 | |
| BCL10 | - | -1 | 24165 | |
| PLOD3 | - | - | 24723 | |
| LIAS | - | - | 25118 |
GO:0021915
| Name | Description | External IDs |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664 HGNC: 11191 Ensembl: ENSG00000176887 HPRD: 02940 |
| PFN1 | profilin 1 | Entrez:5216 Ensembl: ENSG00000108518 HGNC: 8881 HPRD: 01452 |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422 HPRD: 09165 Ensembl: ENSG00000104332 HGNC: 10776 |
| PLXNA2 | plexin A2 | Entrez:5362 HPRD: 03033 Ensembl: ENSG00000076356 HGNC: 9100 |
| NF1 | neurofibromin 1 | Entrez:4763 HGNC: 7765 HPRD: 01203 Ensembl: ENSG00000196712 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| PFN1 | profilin 1 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| PLXNA2 | plexin A2 | ||||
| NF1 | neurofibromin 1 |
| Query gene | Gene | Gene description | Edge score |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| PFN1 | PFN1 | profilin 1 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| PLXNA2 | PLXNA2 | plexin A2 | |
| NF1 | NF1 | neurofibromin 1 |