| Gene | Input weight | Standard | Rank | |
| SOX2 | - | -1 | 125 | |
| CNTNAP2 | 1.0 | 1 | 134 | |
| PAX6 | 0.25 | 1 | 355 | |
| SALL1 | - | - | 408 | |
| PCSK1 | - | - | 604 | |
| POU3F2 | - | - | 653 | |
| NR4A2 | 0.25 | 1 | 713 | |
| LRP6 | - | - | 778 | |
| CREB1 | - | - | 991 | |
| ISL1 | - | - | 1441 | |
| FGFR3 | - | -1 | 1648 | |
| NR0B1 | - | -1 | 1715 | |
| SIX3 | - | -1 | 1742 | |
| NCOR1 | - | - | 1807 | |
| SOX3 | - | - | 2042 | |
| BMPR1A | - | - | 2059 | |
| DRD2 | 0.25 | 1 | 2071 | |
| GHRHR | - | - | 2312 | |
| NKX2-1 | - | - | 2488 | |
| WNT8B | - | - | 2506 | |
| GATA2 | - | -1 | 2710 | |
| WNT5A | - | - | 2870 | |
| GSX1 | - | - | 2967 | |
| WNT1 | - | - | 3263 | |
| CYP19A1 | 0.25 | 1 | 3314 | |
| SLC6A4 | 0.25 | 1 | 3328 | |
| RAX | - | -1 | 3411 | |
| ALDH1A2 | - | - | 3466 | |
| SRD5A1 | 0.25 | 1 | 3730 | |
| OGDH | - | - | 3773 | |
| FOXB1 | - | - | 4202 | |
| FGF10 | - | -1 | 4373 | |
| OTP | - | - | 4497 | |
| GHRH | - | - | 4568 | |
| BMP4 | - | -1 | 5180 | |
| ETS1 | - | - | 5230 | |
| SLC6A3 | 0.25 | 1 | 5276 | |
| HES1 | 0.25 | 1 | 5662 | |
| GLI2 | - | -1 | 5731 | |
| SMO | 0.25 | 1 | 5864 | |
| NOG | - | -1 | 7650 | |
| UQCRQ | - | - | 8688 | |
| TAL2 | - | - | 9456 | |
| FGF2 | - | - | 9627 | |
| DUOX2 | - | -1 | 9797 | |
| TBX19 | - | - | 14813 | |
| ALDH1A3 | - | - | 15783 | |
| KDM1A | - | - | 15967 | |
| CHRNB2 | 0.25 | 1 | 20277 | |
| NKX2-6 | - | -1 | 21164 | |
| ARX | 0.25 | 1 | 21412 | |
| WNT4 | - | - | 21840 | |
| RAB3GAP1 | - | - | 22229 | |
| PITX1 | 0.25 | 1 | 23078 | |
| CDH1 | - | -1 | 23441 |
GO:0021536
| Name | Description | External IDs |
| SOX2 | SRY (sex determining region Y)-box 2 | Entrez:6657 HGNC: 11195 HPRD: 08921 Ensembl: ENSG00000181449 |
| CNTNAP2 | contactin associated protein-like 2 | Entrez:26047 HPRD: 05197 Ensembl: ENSG00000174469 HGNC: 13830 |
| PAX6 | paired box 6 | Entrez:5080 HPRD: 06167 Ensembl: ENSG00000007372 HGNC: 8620 |
| SALL1 | sal-like 1 (Drosophila) | Entrez:6299 HGNC: 10524 Ensembl: ENSG00000103449 HPRD: 03742 |
| PCSK1 | proprotein convertase subtilisin/kexin type 1 | Entrez:5122 HGNC: 8743 HPRD: 01201 Ensembl: ENSG00000175426 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SOX2 | SRY (sex determining region Y)-box 2 | ||||
| CNTNAP2 | contactin associated protein-like 2 | ||||
| PAX6 | paired box 6 | ||||
| SALL1 | sal-like 1 (Drosophila) | ||||
| PCSK1 | proprotein convertase subtilisin/kexin type 1 |
| Query gene | Gene | Gene description | Edge score |
| SOX2 | SOX2 | SRY (sex determining region Y)-box 2 | |
| CNTNAP2 | CNTNAP2 | contactin associated protein-like 2 | |
| PAX6 | PAX6 | paired box 6 | |
| SALL1 | SALL1 | sal-like 1 (Drosophila) | |
| PCSK1 | PCSK1 | proprotein convertase subtilisin/kexin type 1 |