| Gene | Input weight | Standard | Rank | |
| ATXN1 | - | -1 | 8 | |
| BCL11A | - | - | 44 | |
| SOX11 | - | - | 66 | |
| PFN1 | - | - | 74 | |
| SATB2 | 0.25 | 1 | 108 | |
| SOX2 | - | -1 | 125 | |
| NEUROD1 | - | -1 | 136 | |
| NPAS2 | 0.25 | 1 | 151 | |
| FGFR2 | - | -1 | 165 | |
| GRIN1 | - | - | 167 | |
| TBR1 | 0.5 | 1 | 193 | |
| RUNX2 | - | -1 | 209 | |
| ASCL1 | - | - | 229 | |
| MEF2C | 0.25 | 1 | 248 | |
| NFIB | - | - | 271 | |
| PPP3CA | - | - | 278 | |
| NRIP1 | - | - | 289 | |
| POU4F1 | - | - | 292 | |
| AKT1 | 0.25 | 1 | 303 | |
| RARB | 0.25 | 1 | 325 | |
| PAX6 | 0.25 | 1 | 355 | |
| LHX2 | - | - | 362 | |
| PAX3 | - | -1 | 404 | |
| SALL1 | - | - | 408 | |
| CREBBP | - | -1 | 425 | |
| KLF12 | - | - | 445 | |
| PAX2 | - | - | 459 | |
| FOXG1 | - | - | 483 | |
| ACVR1B | - | - | 510 | |
| POU4F2 | - | - | 535 | |
| SOX4 | - | - | 581 | |
| TCF4 | - | - | 610 | |
| ARNT2 | 0.25 | 1 | 620 | |
| COPS5 | - | - | 623 | |
| ZNF148 | - | - | 636 | |
| JUN | - | - | 647 | |
| POU3F2 | - | - | 653 | |
| RPS6KA5 | - | - | 677 | |
| NR4A2 | 0.25 | 1 | 713 | |
| ZIC3 | - | -1 | 722 | |
| THRB | - | -1 | 735 | |
| HNRNPK | - | - | 746 | |
| SMARCA4 | - | - | 751 | |
| CSRNP3 | 0.25 | 1 | 752 | |
| NKX2-2 | - | - | 771 | |
| LRP6 | - | - | 778 | |
| PBX1 | - | - | 823 | |
| ZNF292 | - | - | 885 | |
| UBE3A | 0.25 | 1 | 917 | |
| RFX4 | - | - | 924 | |
| PROX1 | - | - | 962 | |
| HDAC4 | - | - | 963 | |
| NFAT5 | - | - | 980 | |
| CREB1 | - | - | 991 | |
| FGF1 | - | - | 1005 | |
| HIF1A | - | - | 1008 | |
| ZFPM2 | - | -1 | 1023 | |
| WNT10B | - | - | 1030 | |
| RNF4 | - | - | 1036 | |
| HIF3A | - | - | 1039 | |
| RUNX1 | - | -1 | 1041 | |
| JUNB | - | - | 1044 | |
| SOX9 | - | -1 | 1045 | |
| MEF2D | - | - | 1047 | |
| SMARCA2 | - | - | 1077 | |
| BCL11B | - | - | 1127 | |
| NCOA2 | - | - | 1159 | |
| PSIP1 | - | - | 1165 | |
| NCOA3 | - | - | 1178 | |
| EN2 | 0.25 | 1 | 1204 | |
| DLX2 | 0.25 | 1 | 1235 | |
| EP300 | - | -1 | 1256 | |
| OTX2 | - | -1 | 1295 | |
| TBL1XR1 | 0.25 | 1 | 1298 | |
| FOXF2 | - | - | 1315 | |
| PHOX2B | - | - | 1326 | |
| ELK1 | - | - | 1329 | |
| RELA | - | - | 1352 | |
| HMGB2 | - | - | 1353 | |
| NCOA6 | - | - | 1361 | |
| ETS2 | - | - | 1379 | |
| LMO4 | - | - | 1406 | |
| HDAC2 | - | - | 1413 | |
| MEIS2 | - | - | 1420 | |
| NR5A2 | - | - | 1427 | |
| ISL1 | - | - | 1441 | |
| KLF6 | - | -1 | 1463 | |
| ONECUT2 | - | - | 1475 | |
| NFIX | - | - | 1483 | |
| AR | 0.25 | 1 | 1499 | |
| SOX10 | - | -1 | 1510 | |
| CSRNP2 | - | - | 1538 | |
| SMAD3 | - | - | 1541 | |
| MED13 | - | - | 1549 | |
| ZMIZ1 | - | - | 1650 | |
| MAML1 | - | - | 1664 | |
| RFX3 | - | - | 1687 | |
| LEF1 | - | - | 1731 | |
| SIX3 | - | -1 | 1742 | |
| TBX5 | - | - | 1743 | |
| WNT2 | 0.25 | 1 | 1783 | |
| CLOCK | 0.25 | 1 | 1833 | |
| FOXA2 | - | - | 1835 | |
| FOS | - | - | 1839 | |
| PPARGC1A | - | - | 1920 | |
| NPAS4 | - | - | 1960 | |
| TEAD1 | - | - | 1962 | |
| APP | - | - | 1991 | |
| IGF1 | 0.25 | 1 | 1993 | |
| TAL1 | - | - | 2070 | |
| DRD2 | 0.25 | 1 | 2071 | |
| RLF | - | - | 2138 | |
| SHOX2 | - | - | 2149 | |
| IL17A | - | - | 2179 | |
| HOXD9 | - | - | 2201 | |
| FOXD3 | - | - | 2272 | |
| FOXA1 | - | - | 2277 | |
| MYOD1 | - | - | 2280 | |
| STRN3 | - | - | 2292 | |
| NTF3 | 0.25 | 1 | 2294 | |
| NEUROG2 | - | - | 2345 | |
| MSX1 | - | -1 | 2365 | |
| TBL1X | 0.25 | 1 | 2388 | |
| TFAP2B | - | - | 2409 | |
| CNOT7 | - | - | 2421 | |
| RBMX | - | - | 2432 | |
| RBPJ | - | - | 2433 | |
| NFIA | - | - | 2434 | |
| TFAP2A | - | -1 | 2460 | |
| SOX12 | - | - | 2475 | |
| NKX2-1 | - | - | 2488 | |
| MYB | - | - | 2519 | |
| T | - | - | 2584 | |
| STAT3 | - | -1 | 2598 | |
| SREBF2 | - | - | 2664 | |
| ZEB1 | - | -1 | 2672 | |
| HDAC5 | - | - | 2683 | |
| NRL | - | -1 | 2691 | |
| SRF | - | - | 2700 | |
| GATA2 | - | -1 | 2710 | |
| MYF6 | - | - | 2717 | |
| CRTC1 | - | - | 2739 | |
| DRD3 | 0.25 | 1 | 2757 | |
| HAND1 | - | - | 2763 | |
| MKL1 | - | - | 2770 | |
| NKX3-1 | - | - | 2779 | |
| SMAD1 | - | - | 2829 | |
| HOXD10 | - | - | 2845 | |
| CEBPB | - | - | 2850 | |
| WNT5A | - | - | 2870 | |
| NR1H4 | - | - | 2888 | |
| S1PR1 | - | - | 2910 | |
| SMAD4 | - | - | 2927 | |
| FOXO3 | - | - | 2950 | |
| ALX1 | - | - | 2966 | |
| GSX1 | - | - | 2967 | |
| CNBP | - | -1 | 2968 | |
| SUPT5H | - | - | 3001 | |
| KLF4 | - | - | 3003 | |
| PAX8 | - | -1 | 3021 | |
| TEF | - | - | 3023 | |
| AKT2 | - | -1 | 3025 | |
| MED12 | 0.25 | 1 | 3028 | |
| WT1 | - | -1 | 3046 | |
| TFE3 | - | - | 3093 | |
| NKX6-1 | - | - | 3174 | |
| HSF4 | - | - | 3183 | |
| GATA3 | - | - | 3207 | |
| ERCC3 | - | -1 | 3218 | |
| IFNB1 | - | - | 3220 | |
| BMP6 | - | - | 3242 | |
| FOXE3 | - | -1 | 3264 | |
| SMARCC1 | - | - | 3276 | |
| NOTCH1 | - | -1 | 3360 | |
| FOXE1 | - | -1 | 3384 | |
| TCEA1 | - | - | 3397 | |
| CITED2 | - | - | 3457 | |
| CDON | - | - | 3482 | |
| NEUROG1 | 0.25 | 1 | 3515 | |
| EGR1 | - | - | 3527 | |
| SUPT4H1 | - | - | 3593 | |
| HOXA13 | - | - | 3602 | |
| DAB2IP | - | - | 3635 | |
| LMX1B | 0.25 | 1 | 3653 | |
| GABPB2 | - | - | 3659 | |
| BMP2 | - | -1 | 3686 | |
| ESRRB | 0.25 | 1 | 3688 | |
| HAND2 | - | - | 3736 | |
| HOXA2 | - | - | 3750 | |
| SFRP2 | - | - | 3758 | |
| ARNTL | - | - | 3856 | |
| CAMTA2 | - | - | 3882 | |
| STAT5B | - | - | 3888 | |
| MLLT10 | - | -1 | 3939 | |
| ZNF462 | - | - | 3948 | |
| MITF | - | -1 | 3985 | |
| EN1 | - | - | 3999 | |
| ELF1 | - | - | 4030 | |
| EGR2 | 0.25 | 1 | 4059 | |
| HOXA7 | - | - | 4063 | |
| SCAP | - | - | 4068 | |
| BMP3 | - | - | 4142 | |
| SKI | - | - | 4231 | |
| ABLIM1 | - | - | 4336 | |
| PRPF6 | - | - | 4396 | |
| MECOM | - | - | 4397 | |
| PLAGL2 | - | - | 4410 | |
| PLA2G1B | - | - | 4440 | |
| GDNF | - | -1 | 4462 | |
| HOXD13 | 0.25 | 1 | 4465 | |
| EPC1 | - | - | 4520 | |
| CDX1 | - | - | 4523 | |
| TLX1 | - | - | 4530 | |
| PHOX2A | - | - | 4551 | |
| IL6 | - | -1 | 4578 | |
| SIX4 | - | - | 4623 | |
| CDK7 | - | - | 4633 | |
| ABLIM3 | - | - | 4647 | |
| VEGFA | 0.25 | 1 | 4691 | |
| IL4 | - | - | 4723 | |
| MAPK14 | - | - | 4729 | |
| NANOG | - | - | 4730 | |
| IHH | - | -1 | 4742 | |
| SOX8 | - | - | 4770 | |
| WNT3A | - | - | 4844 | |
| CCNH | - | - | 4949 | |
| LMO1 | - | - | 4963 | |
| NR2C2 | - | - | 4995 | |
| CIITA | - | -1 | 5009 | |
| BHLHE23 | - | - | 5031 | |
| FOSL1 | - | - | 5100 | |
| HNF1A | - | -1 | 5114 | |
| BMP4 | - | -1 | 5180 | |
| ETS1 | - | - | 5230 | |
| EPAS1 | - | - | 5248 | |
| FOXD1 | - | - | 5256 | |
| LPIN1 | - | - | 5282 | |
| GLIS1 | - | - | 5283 | |
| HDAC1 | - | - | 5284 | |
| MED21 | - | - | 5306 | |
| TGFB3 | - | -1 | 5321 | |
| TFAP2C | - | - | 5332 | |
| BCL9L | - | - | 5421 | |
| FOXI1 | - | -1 | 5442 | |
| ALX4 | - | - | 5466 | |
| TAF9 | - | - | 5472 | |
| ATF4 | - | - | 5474 | |
| PTH | - | - | 5481 | |
| NKX2-5 | 0.25 | 1 | 5490 | |
| FOXD2 | - | - | 5493 | |
| NKX2-3 | - | - | 5540 | |
| VGLL2 | - | - | 5541 | |
| MURC | - | - | 5554 | |
| AGRN | 0.25 | 1 | 5611 | |
| PRKD2 | - | - | 5637 | |
| GLIS3 | - | - | 5656 | |
| HES1 | 0.25 | 1 | 5662 | |
| TCF7L2 | - | -1 | 5670 | |
| GLI2 | - | -1 | 5731 | |
| PPARA | - | - | 5743 | |
| MYOCD | - | - | 5769 | |
| NOBOX | - | -1 | 5784 | |
| IL2 | - | - | 5825 | |
| KLF15 | - | - | 5830 | |
| TCF3 | - | - | 5880 | |
| ONECUT1 | - | - | 5891 | |
| USF2 | - | - | 5959 | |
| TBX20 | - | -1 | 6000 | |
| FOXL2 | - | -1 | 6002 | |
| RARA | 0.25 | 1 | 6024 | |
| MEF2A | - | - | 6060 | |
| NFKBIA | - | - | 6067 | |
| MAPK3 | 0.25 | 1 | 6096 | |
| BARX2 | - | - | 6105 | |
| TWIST1 | - | -1 | 6128 | |
| MYF5 | - | - | 6153 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| FOXP3 | - | -1 | 6270 | |
| RORA | - | - | 6355 | |
| WNT7A | - | - | 6375 | |
| MTA2 | - | - | 6450 | |
| PRDM9 | - | - | 6479 | |
| TFAP4 | - | - | 6483 | |
| MAML2 | - | - | 6497 | |
| MED14 | - | - | 6537 | |
| FOXQ1 | - | - | 6542 | |
| BCL3 | - | - | 6552 | |
| MED1 | - | - | 6574 | |
| GLI1 | - | - | 6597 | |
| NR1H2 | - | - | 6604 | |
| SIX2 | - | - | 6713 | |
| MEN1 | - | -1 | 6723 | |
| GRHL3 | - | - | 6732 | |
| TP53BP1 | - | - | 6777 | |
| VSX2 | - | -1 | 6798 | |
| GLIS2 | - | -1 | 6865 | |
| SOX15 | - | - | 6897 | |
| ABRA | - | - | 6916 | |
| FOXO1 | 0.25 | 1 | 6970 | |
| CRX | - | -1 | 7007 | |
| HOXA5 | - | - | 7014 | |
| MAML3 | - | - | 7206 | |
| SMAD2 | - | - | 7224 | |
| CHD8 | 1.0 | 1 | 7247 | |
| TLR4 | - | -1 | 7283 | |
| FOXD4L1 | - | - | 7290 | |
| GLP1R | - | - | 7291 | |
| NEUROG3 | - | - | 7305 | |
| IL11 | - | - | 7322 | |
| ELF4 | - | - | 7327 | |
| NR5A1 | - | -1 | 7588 | |
| PBX2 | - | - | 7631 | |
| TBK1 | - | - | 7642 | |
| MAFB | - | - | 7672 | |
| GATA5 | - | - | 7703 | |
| CAPRIN2 | - | - | 8066 | |
| HMGB1 | 0.25 | 1 | 8141 | |
| FOXC2 | - | - | 8308 | |
| MC1R | - | -1 | 8333 | |
| PDX1 | - | -1 | 8378 | |
| MYOG | - | - | 8556 | |
| IL17F | - | - | 8673 | |
| HES3 | - | - | 8916 | |
| NFATC2 | - | - | 8993 | |
| GLI3 | - | -1 | 9032 | |
| MED17 | - | - | 9037 | |
| USF1 | - | - | 9041 | |
| ATOH1 | - | - | 9258 | |
| JAK3 | - | - | 9292 | |
| POU2F3 | - | - | 9410 | |
| SALL4 | - | - | 9465 | |
| NFATC3 | - | - | 9474 | |
| HNF1B | - | -1 | 9562 | |
| ZMIZ2 | - | - | 9567 | |
| FOXA3 | - | - | 9582 | |
| FGF2 | - | - | 9627 | |
| CDKN2A | - | -1 | 9650 | |
| INHBA | - | - | 9731 | |
| FOXD4 | - | - | 9835 | |
| RBM15 | - | - | 10015 | |
| UTF1 | - | - | 10125 | |
| FOXO4 | - | - | 10242 | |
| TFAP2E | - | - | 10247 | |
| IL26 | - | - | 10272 | |
| MLXIPL | - | - | 10379 | |
| FOXD4L4 | - | - | 10472 | |
| KMT2D | - | - | 10486 | |
| MYO6 | - | -1 | 10509 | |
| PAX9 | - | -1 | 10534 | |
| HEYL | - | - | 10561 | |
| MESP1 | - | - | 10948 | |
| RARG | 0.25 | 1 | 10956 | |
| LPIN2 | - | - | 10958 | |
| IL33 | - | - | 11000 | |
| TAF7 | - | - | 11048 | |
| ABLIM2 | - | - | 11058 | |
| GATA4 | - | -1 | 11137 | |
| ZBTB38 | - | - | 11166 | |
| HOXB1 | 0.25 | 1 | 11233 | |
| EOMES | - | - | 11394 | |
| PKNOX1 | - | - | 11462 | |
| AHR | - | - | 11579 | |
| MTF1 | 0.25 | 1 | 11602 | |
| MKL2 | 0.25 | 1 | 11676 | |
| FOXH1 | - | - | 11747 | |
| HMGN3 | - | - | 11816 | |
| GDF2 | - | - | 11942 | |
| GTF2A2 | - | - | 11944 | |
| HNF4A | - | -1 | 12281 | |
| EVX1 | - | - | 12405 | |
| SP1 | - | - | 12422 | |
| TLR9 | - | - | 12436 | |
| HHEX | - | - | 12438 | |
| FOXO6 | - | - | 12694 | |
| TLR2 | - | -1 | 12838 | |
| POMC | 0.25 | 1 | 12902 | |
| SMARCB1 | - | -1 | 12909 | |
| RPS6KA4 | - | - | 13250 | |
| GATA6 | - | -1 | 13349 | |
| GTF2H1 | - | - | 13447 | |
| NLRC5 | - | - | 13492 | |
| MEOX1 | - | - | 13570 | |
| E2F1 | - | - | 13572 | |
| TCF7L1 | - | - | 13850 | |
| BHLHA15 | - | - | 13923 | |
| NFYA | - | - | 13978 | |
| LDB1 | - | - | 14274 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| MAFA | - | - | 14795 | |
| TBX19 | - | - | 14813 | |
| TRAF6 | - | - | 14847 | |
| RXRA | 0.25 | 1 | 15046 | |
| CSRNP1 | - | - | 15071 | |
| F2RL1 | - | - | 15088 | |
| RHOQ | - | - | 15107 | |
| SIX1 | - | -1 | 15117 | |
| SKAP1 | - | - | 15201 | |
| PLAGL1 | - | - | 15224 | |
| FOXS1 | - | - | 15328 | |
| NUFIP1 | - | - | 15544 | |
| BSX | - | - | 15697 | |
| ATF1 | - | - | 15773 | |
| TFEB | - | - | 15921 | |
| SHH | - | -1 | 15942 | |
| TP73 | - | - | 15964 | |
| KDM1A | - | - | 15967 | |
| SOX18 | - | - | 16286 | |
| PPARGC1B | - | -1 | 16411 | |
| RBM14 | - | - | 16855 | |
| SREBF1 | - | - | 16874 | |
| TNFRSF1A | - | - | 16905 | |
| FOXD4L5 | - | - | 16935 | |
| LRP5 | - | -1 | 16985 | |
| ENG | - | -1 | 17647 | |
| MYD88 | - | - | 17730 | |
| FOXD4L2 | - | - | 17995 | |
| OSR2 | - | - | 18904 | |
| ARRB1 | - | - | 19005 | |
| AATF | - | - | 19262 | |
| STAT5A | - | - | 19316 | |
| TEAD2 | - | - | 19457 | |
| FOXD4L6 | - | - | 19463 | |
| CYR61 | - | - | 19764 | |
| TNF | 0.25 | 1 | 19823 | |
| DCAF6 | - | - | 19874 | |
| OSM | - | - | 19901 | |
| SLC11A1 | - | - | 19965 | |
| NFKB1 | - | - | 20216 | |
| TAF1 | - | - | 20307 | |
| TLR3 | - | - | 20315 | |
| THRAP3 | - | - | 20347 | |
| KAT2B | - | - | 20429 | |
| STK16 | - | - | 20465 | |
| MNAT1 | - | - | 20484 | |
| ERCC2 | - | -1 | 20724 | |
| LIF | - | - | 20888 | |
| ITGA6 | - | - | 21003 | |
| UHRF1 | - | - | 21057 | |
| SS18 | - | - | 21353 | |
| POU5F1 | - | - | 21422 | |
| TAF2 | - | - | 21614 | |
| IRF1 | - | -1 | 21687 | |
| C1orf85 | - | - | 21879 | |
| FZD5 | - | - | 21891 | |
| PPARG | - | -1 | 21945 | |
| TP53 | 0.25 | 1 | 21968 | |
| AKIRIN2 | - | - | 21980 | |
| NFIC | - | - | 22115 | |
| ESRRA | - | - | 22220 | |
| ARHGEF10L | - | - | 22238 | |
| MED6 | - | - | 22456 | |
| CRLF3 | - | - | 22462 | |
| RFXANK | - | -1 | 22485 | |
| SRA1 | - | - | 22531 | |
| DDX58 | - | - | 22541 | |
| CREB3L4 | - | - | 22542 | |
| FADD | - | - | 22674 | |
| ADRB2 | 0.25 | 1 | 22718 | |
| GTF2F2 | - | - | 22776 | |
| WWTR1 | - | - | 22777 | |
| FOXC1 | - | -1 | 22868 | |
| INO80 | - | - | 22938 | |
| ATF6 | - | - | 22953 | |
| PITX1 | 0.25 | 1 | 23078 | |
| XRCC6 | - | - | 23088 | |
| GABPB1 | - | - | 23146 | |
| RIPK1 | - | - | 23173 | |
| TMEM173 | - | - | 23197 | |
| IGF2 | 0.25 | 1 | 23391 | |
| CD3D | - | - | 23427 | |
| IRAK4 | - | - | 23495 | |
| MESP2 | - | -1 | 23558 | |
| ELL3 | - | - | 23775 | |
| RNF10 | - | - | 23821 | |
| BLOC1S2 | - | - | 23908 | |
| SPDEF | - | - | 23955 | |
| TP63 | - | -1 | 24113 | |
| BRCA1 | - | -1 | 24158 | |
| PSMC3IP | - | - | 24161 | |
| MOSPD1 | - | - | 24340 | |
| SQSTM1 | - | -1 | 24354 | |
| FHOD1 | - | - | 24644 | |
| FSTL3 | - | - | 24700 | |
| CENPK | - | - | 24745 | |
| NR1H3 | - | - | 24805 | |
| IRF7 | - | - | 24810 | |
| NFATC1 | - | - | 24816 | |
| PRKDC | - | - | 24908 | |
| FOXM1 | - | - | 25108 | |
| TEAD4 | - | - | 25169 | |
| GABPA | - | - | 25207 | |
| MAVS | - | - | 25347 | |
| PUS1 | - | - | 25678 |
GO:0045944
| Name | Description | External IDs |
| ATXN1 | ataxin 1 | Entrez:6310  Ensembl: ENSG00000124788  HPRD: 03333  HGNC: 10548  |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | Entrez:53335  Ensembl: ENSG00000119866  HGNC: 13221  HPRD: 05949  |
| SOX11 | SRY (sex determining region Y)-box 11 | Entrez:6664  HGNC: 11191  Ensembl: ENSG00000176887  HPRD: 02940  |
| PFN1 | profilin 1 | Entrez:5216  Ensembl: ENSG00000108518  HGNC: 8881  HPRD: 01452  |
| SATB2 | SATB homeobox 2 | Entrez:23314  Ensembl: ENSG00000119042  HPRD: 12178  HGNC: 21637  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| ATXN1 | ataxin 1 | ||||
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | ||||
| SOX11 | SRY (sex determining region Y)-box 11 | ||||
| PFN1 | profilin 1 | ||||
| SATB2 | SATB homeobox 2 |
| Query gene | Gene | Gene description | Edge score |
| ATXN1 | ATXN1 | ataxin 1 | |
| BCL11A | BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | |
| SOX11 | SOX11 | SRY (sex determining region Y)-box 11 | |
| PFN1 | PFN1 | profilin 1 | |
| SATB2 | SATB2 | SATB homeobox 2 |