| Gene | Input weight | Standard | Rank | |
| FGFR2 | - | -1 | 165 | |
| SFRP1 | - | - | 204 | |
| RUNX2 | - | -1 | 209 | |
| PAX2 | - | - | 459 | |
| FBXW7 | - | - | 525 | |
| APC | 0.25 | 1 | 528 | |
| BDNF | 0.25 | 1 | 754 | |
| LRP6 | - | - | 778 | |
| DICER1 | - | -1 | 834 | |
| BMP7 | - | - | 987 | |
| FGF1 | - | - | 1005 | |
| SOX9 | - | -1 | 1045 | |
| RAC1 | - | - | 1087 | |
| FOXP1 | 0.5 | 1 | 1117 | |
| WNT2B | - | - | 1126 | |
| AGTR2 | 0.25 | 1 | 1418 | |
| AR | 0.25 | 1 | 1499 | |
| WNT2 | 0.25 | 1 | 1783 | |
| ETV5 | - | - | 1857 | |
| CITED1 | - | - | 1867 | |
| ESR1 | 0.25 | 1 | 1914 | |
| LHX1 | - | - | 1926 | |
| VANGL2 | - | - | 1957 | |
| FGF7 | - | - | 1995 | |
| BMPR1A | - | - | 2059 | |
| POR | 0.25 | 1 | 2359 | |
| BCOR | - | -1 | 2451 | |
| TFAP2A | - | -1 | 2460 | |
| FGFR1 | - | - | 2550 | |
| WNT5A | - | - | 2870 | |
| WNT6 | - | - | 2891 | |
| AMELX | - | -1 | 2925 | |
| PAX8 | - | -1 | 3021 | |
| WT1 | - | -1 | 3046 | |
| FGF3 | - | - | 3192 | |
| GATA3 | - | - | 3207 | |
| CSF1 | - | - | 3235 | |
| EDNRA | - | -1 | 3271 | |
| NOTCH1 | - | -1 | 3360 | |
| CITED2 | - | - | 3457 | |
| NGFR | 0.25 | 1 | 3554 | |
| MET | 1.0 | 1 | 3618 | |
| BMP2 | - | -1 | 3686 | |
| HAND2 | - | - | 3736 | |
| SFRP2 | - | - | 3758 | |
| AGT | - | -1 | 3783 | |
| NTN4 | - | - | 4045 | |
| HGF | 0.25 | 1 | 4189 | |
| FOXP2 | 0.5 | 1 | 4225 | |
| FGF10 | - | -1 | 4373 | |
| DVL3 | - | - | 4438 | |
| GDNF | - | -1 | 4462 | |
| HOXD13 | 0.25 | 1 | 4465 | |
| SIX4 | - | - | 4623 | |
| PDGFA | - | - | 4678 | |
| VEGFA | 0.25 | 1 | 4691 | |
| SOX8 | - | - | 4770 | |
| BHLHE23 | - | - | 5031 | |
| BMP4 | - | -1 | 5180 | |
| IFNG | - | -1 | 5255 | |
| HES1 | 0.25 | 1 | 5662 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| MMP20 | - | -1 | 6554 | |
| GRHL3 | - | - | 6732 | |
| BAX | - | - | 7313 | |
| NOG | - | -1 | 7650 | |
| CARM1 | - | - | 8421 | |
| WNT9B | - | - | 8495 | |
| WNT10A | - | - | 9302 | |
| HNF1B | - | -1 | 9562 | |
| EDN1 | - | - | 9566 | |
| FGF2 | - | - | 9627 | |
| ASPN | - | - | 10001 | |
| HOXB7 | - | - | 10514 | |
| SPRY1 | - | - | 10579 | |
| MESP1 | - | - | 10948 | |
| DVL2 | - | - | 12293 | |
| FRS2 | - | - | 12610 | |
| IFT88 | - | - | 12821 | |
| TNFRSF11B | - | - | 13020 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| RXRA | 0.25 | 1 | 15046 | |
| SIX1 | - | -1 | 15117 | |
| SHH | - | -1 | 15942 | |
| DVL1P1 | - | - | 19166 | |
| TNF | 0.25 | 1 | 19823 | |
| FZD6 | - | - | 19825 | |
| LIF | - | - | 20888 | |
| MYC | - | -1 | 21066 | |
| DVL1 | - | - | 21155 | |
| POU5F1 | - | - | 21422 | |
| WNT4 | - | - | 21840 | |
| FGFR4 | - | - | 22438 | |
| CASP6 | - | - | 24423 |
GO:2000027
| Name | Description | External IDs |
| FGFR2 | fibroblast growth factor receptor 2 | Entrez:2263 HPRD: 01492 Ensembl: ENSG00000066468 HGNC: 3689 |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422 HPRD: 09165 Ensembl: ENSG00000104332 HGNC: 10776 |
| RUNX2 | runt-related transcription factor 2 | Entrez:860 Ensembl: ENSG00000124813 HGNC: 10472 HPRD: 02566 |
| PAX2 | paired box 2 | Entrez:5076 HGNC: 8616 Ensembl: ENSG00000075891 HPRD: 01330 |
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase | Entrez:55294 HPRD: 05888 Ensembl: ENSG00000109670 HGNC: 16712 |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| FGFR2 | fibroblast growth factor receptor 2 | ||||
| SFRP1 | secreted frizzled-related protein 1 | ||||
| RUNX2 | runt-related transcription factor 2 | ||||
| PAX2 | paired box 2 | ||||
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |
| Query gene | Gene | Gene description | Edge score |
| FGFR2 | FGFR2 | fibroblast growth factor receptor 2 | |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| RUNX2 | RUNX2 | runt-related transcription factor 2 | |
| PAX2 | PAX2 | paired box 2 | |
| FBXW7 | FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |