| Gene | Input weight | Standard | Rank | |
| PTBP1 | - | - | 583 | |
| HDAC4 | - | - | 963 | |
| SOX9 | - | -1 | 1045 | |
| GSK3A | - | - | 2346 | |
| HDAC5 | - | - | 2683 | |
| NOTCH1 | - | -1 | 3360 | |
| TBX3 | - | - | 3843 | |
| SOX8 | - | - | 4770 | |
| BMP4 | - | -1 | 5180 | |
| NKX2-5 | 0.25 | 1 | 5490 | |
| EREG | - | - | 8504 | |
| RCAN1 | - | - | 9640 | |
| MBNL3 | - | - | 10153 | |
| FOXO4 | - | - | 10242 | |
| ZFHX3 | - | -1 | 10438 | |
| NMRK2 | - | - | 11469 | |
| FOXO6 | - | - | 12694 | |
| PRDM6 | - | - | 15834 | |
| SHH | - | -1 | 15942 |
GO:0051148
| Name | Description | External IDs |
| PTBP1 | polypyrimidine tract binding protein 1 | Entrez:5725  HGNC: 9583  Ensembl: ENSG00000011304  HPRD: 02823  |
| HDAC4 | histone deacetylase 4 | Entrez:9759  Ensembl: ENSG00000068024  HPRD: 05610  HGNC: 14063  |
| SOX9 | SRY (sex determining region Y)-box 9 | Entrez:6662  HPRD: 06427  HGNC: 11204  Ensembl: ENSG00000125398  |
| GSK3A | glycogen synthase kinase 3 alpha | Entrez:2931  HGNC: 4616  HPRD: 06002  Ensembl: ENSG00000105723  |
| HDAC5 | histone deacetylase 5 | Entrez:10014  Ensembl: ENSG00000108840  HPRD: 09246  HGNC: 14068  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| PTBP1 | polypyrimidine tract binding protein 1 | ||||
| HDAC4 | histone deacetylase 4 | ||||
| SOX9 | SRY (sex determining region Y)-box 9 | ||||
| GSK3A | glycogen synthase kinase 3 alpha | ||||
| HDAC5 | histone deacetylase 5 |
| Query gene | Gene | Gene description | Edge score |
| PTBP1 | PTBP1 | polypyrimidine tract binding protein 1 | |
| HDAC4 | HDAC4 | histone deacetylase 4 | |
| SOX9 | SOX9 | SRY (sex determining region Y)-box 9 | |
| GSK3A | GSK3A | glycogen synthase kinase 3 alpha | |
| HDAC5 | HDAC5 | histone deacetylase 5 |