| Gene | Input weight | Standard | Rank | |
| SFRP1 | - | - | 204 | |
| CHRD | - | - | 697 | |
| HDAC4 | - | - | 963 | |
| SMAD3 | - | - | 1541 | |
| ID2 | - | - | 1719 | |
| CITED1 | - | - | 1867 | |
| CDK6 | - | - | 2224 | |
| FGFR1 | - | - | 2550 | |
| FGF23 | - | -1 | 2939 | |
| NOTCH1 | - | -1 | 3360 | |
| SKI | - | - | 4231 | |
| AXIN2 | - | -1 | 5927 | |
| TWIST1 | - | -1 | 6128 | |
| MEN1 | - | -1 | 6723 | |
| NOG | - | -1 | 7650 | |
| ID1 | - | - | 8270 | |
| UCMA | - | - | 10818 | |
| OSTN | - | - | 11307 | |
| TWIST2 | - | - | 14594 | |
| LRP5 | - | -1 | 16985 | |
| ID3 | - | - | 20004 | |
| HDAC7 | - | - | 20410 | |
| C14orf169 | - | - | 22418 | |
| NBR1 | - | - | 24836 | |
| TWSG1 | - | - | 25171 |
GO:0045668
| Name | Description | External IDs |
| SFRP1 | secreted frizzled-related protein 1 | Entrez:6422  HPRD: 09165  Ensembl: ENSG00000104332  HGNC: 10776  |
| CHRD | chordin | Entrez:8646  Ensembl: ENSG00000090539  HGNC: 1949  HPRD: 04592  |
| HDAC4 | histone deacetylase 4 | Entrez:9759  Ensembl: ENSG00000068024  HPRD: 05610  HGNC: 14063  |
| SMAD3 | SMAD family member 3 | Entrez:4088  HPRD: 04380  HGNC: 6769  Ensembl: ENSG00000166949  |
| ID2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | Entrez:3398  HPRD: 02664  HGNC: 5361  Ensembl: ENSG00000115738  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SFRP1 | secreted frizzled-related protein 1 | ||||
| CHRD | chordin | ||||
| HDAC4 | histone deacetylase 4 | ||||
| SMAD3 | SMAD family member 3 | ||||
| ID2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein |
| Query gene | Gene | Gene description | Edge score |
| SFRP1 | SFRP1 | secreted frizzled-related protein 1 | |
| CHRD | CHRD | chordin | |
| HDAC4 | HDAC4 | histone deacetylase 4 | |
| SMAD3 | SMAD3 | SMAD family member 3 | |
| ID2 | ID2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein |