| Gene | Input weight | Standard | Rank | |
| SALL1 | - | - | 408 | |
| PAX2 | - | - | 459 | |
| PBX1 | - | - | 823 | |
| PTCH1 | - | -1 | 1149 | |
| CITED1 | - | - | 1867 | |
| FOXD3 | - | - | 2272 | |
| WNT6 | - | - | 2891 | |
| ILK | - | - | 2917 | |
| PAX8 | - | -1 | 3021 | |
| WT1 | - | -1 | 3046 | |
| WNT1 | - | - | 3263 | |
| AGT | - | -1 | 3783 | |
| HOXA11 | - | - | 4215 | |
| GDNF | - | -1 | 4462 | |
| CD44 | - | - | 5047 | |
| TCF21 | - | - | 5065 | |
| BMP4 | - | -1 | 5180 | |
| FOXD1 | - | - | 5256 | |
| FOXD2 | - | - | 5493 | |
| HOXD11 | 0.25 | 1 | 5555 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| CTNNBIP1 | - | - | 6252 | |
| FOXD4L1 | - | - | 7290 | |
| PSPN | - | - | 7530 | |
| NPNT | - | - | 7660 | |
| PGF | - | - | 7841 | |
| WNT9B | - | - | 8495 | |
| GLI3 | - | -1 | 9032 | |
| FGF2 | - | - | 9627 | |
| FOXD4 | - | - | 9835 | |
| GZF1 | - | - | 10434 | |
| FOXD4L4 | - | - | 10472 | |
| DLG1 | - | - | 10557 | |
| SIX1 | - | -1 | 15117 | |
| SHH | - | -1 | 15942 | |
| FOXD4L5 | - | - | 16935 | |
| FOXD4L2 | - | - | 17995 | |
| LAMA5 | - | - | 19186 | |
| FOXD4L6 | - | - | 19463 | |
| MYC | - | -1 | 21066 | |
| WNT4 | - | - | 21840 |
GO:0001658
| Name | Description | External IDs |
| SALL1 | sal-like 1 (Drosophila) | Entrez:6299  HGNC: 10524  Ensembl: ENSG00000103449  HPRD: 03742  |
| PAX2 | paired box 2 | Entrez:5076  HGNC: 8616  Ensembl: ENSG00000075891  HPRD: 01330  |
| PBX1 | pre-B-cell leukemia homeobox 1 | Entrez:5087  Ensembl: ENSG00000185630  HGNC: 8632  HPRD: 08889  |
| PTCH1 | patched 1 | Entrez:5727  Ensembl: ENSG00000185920  HGNC: 9585  HPRD: 03200  |
| CITED1 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 | Entrez:4435  HGNC: 1986  HPRD: 02146  Ensembl: ENSG00000125931  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| SALL1 | sal-like 1 (Drosophila) | ||||
| PAX2 | paired box 2 | ||||
| PBX1 | pre-B-cell leukemia homeobox 1 | ||||
| PTCH1 | patched 1 | ||||
| CITED1 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 |
| Query gene | Gene | Gene description | Edge score |
| SALL1 | SALL1 | sal-like 1 (Drosophila) | |
| PAX2 | PAX2 | paired box 2 | |
| PBX1 | PBX1 | pre-B-cell leukemia homeobox 1 | |
| PTCH1 | PTCH1 | patched 1 | |
| CITED1 | CITED1 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 |