| Gene | Input weight | Standard | Rank | |
| RET | - | -1 | 384 | |
| PAX2 | - | - | 459 | |
| BMP7 | - | - | 987 | |
| SOX9 | - | -1 | 1045 | |
| WNT2B | - | - | 1126 | |
| AGTR2 | 0.25 | 1 | 1418 | |
| CITED1 | - | - | 1867 | |
| LHX1 | - | - | 1926 | |
| PAX8 | - | -1 | 3021 | |
| WT1 | - | -1 | 3046 | |
| GATA3 | - | - | 3207 | |
| EDNRA | - | -1 | 3271 | |
| EGR1 | - | - | 3527 | |
| AGT | - | -1 | 3783 | |
| GDNF | - | -1 | 4462 | |
| SIX4 | - | - | 4623 | |
| PDGFA | - | - | 4678 | |
| VEGFA | 0.25 | 1 | 4691 | |
| SOX8 | - | - | 4770 | |
| ADIPOQ | 0.25 | 1 | 4834 | |
| BMP4 | - | -1 | 5180 | |
| IFNG | - | -1 | 5255 | |
| FOXD1 | - | - | 5256 | |
| FOXD2 | - | - | 5493 | |
| OSR1 | - | - | 6192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| FOXD4L1 | - | - | 7290 | |
| NOG | - | -1 | 7650 | |
| WNT9B | - | - | 8495 | |
| HNF1B | - | -1 | 9562 | |
| FOXD4 | - | - | 9835 | |
| FOXD4L4 | - | - | 10472 | |
| HOXB7 | - | - | 10514 | |
| PDGFB | - | - | 12484 | |
| TGFB1 | 0.25 | 1 | 14736 | |
| SIX1 | - | -1 | 15117 | |
| SHH | - | -1 | 15942 | |
| FOXD4L5 | - | - | 16935 | |
| FOXD4L2 | - | - | 17995 | |
| FOXD4L6 | - | - | 19463 | |
| LIF | - | - | 20888 | |
| PDGFRB | - | - | 21054 | |
| MYC | - | -1 | 21066 | |
| WNT4 | - | - | 21840 |
GO:0090183
| Name | Description | External IDs |
| RET | ret proto-oncogene | Entrez:5979  HGNC: 9967  Ensembl: ENSG00000165731  HPRD: 01266  |
| PAX2 | paired box 2 | Entrez:5076  HGNC: 8616  Ensembl: ENSG00000075891  HPRD: 01330  |
| BMP7 | bone morphogenetic protein 7 | Entrez:655  Ensembl: ENSG00000101144  HGNC: 1074  HPRD: 00212  |
| SOX9 | SRY (sex determining region Y)-box 9 | Entrez:6662  HPRD: 06427  HGNC: 11204  Ensembl: ENSG00000125398  |
| WNT2B | wingless-type MMTV integration site family, member 2B | Entrez:7482  Ensembl: ENSG00000134245  HGNC: 12781  HPRD: 03574  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| RET | ret proto-oncogene | ||||
| PAX2 | paired box 2 | ||||
| BMP7 | bone morphogenetic protein 7 | ||||
| SOX9 | SRY (sex determining region Y)-box 9 | ||||
| WNT2B | wingless-type MMTV integration site family, member 2B |
| Query gene | Gene | Gene description | Edge score |
| RET | RET | ret proto-oncogene | |
| PAX2 | PAX2 | paired box 2 | |
| BMP7 | BMP7 | bone morphogenetic protein 7 | |
| SOX9 | SOX9 | SRY (sex determining region Y)-box 9 | |
| WNT2B | WNT2B | wingless-type MMTV integration site family, member 2B |