| Gene | Input weight | Standard | Rank | |
| CHRD | - | - | 697 | |
| LRP6 | - | - | 778 | |
| AMOT | - | - | 933 | |
| OTX2 | - | -1 | 1295 | |
| FOXA2 | - | - | 1835 | |
| LHX1 | - | - | 1926 | |
| TENM4 | - | - | 1952 | |
| NODAL | - | -1 | 2184 | |
| T | - | - | 2584 | |
| SRF | - | - | 2700 | |
| WNT5A | - | - | 2870 | |
| SMAD4 | - | - | 2927 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| RNF2 | - | - | 8552 | |
| GDF3 | - | -1 | 9473 | |
| NAT8 | - | - | 10054 | |
| PPAP2B | - | - | 10712 | |
| GATA4 | - | -1 | 11137 | |
| NAT8B | - | - | 11702 | |
| ACVR1 | - | -1 | 11780 | |
| FRS2 | - | - | 12610 | |
| LDB1 | - | - | 14274 | |
| LRP5 | - | -1 | 16985 | |
| UGDH | - | - | 22090 | |
| NSD1 | 0.25 | 1 | 23293 |
GO:0001702
| Name | Description | External IDs |
| CHRD | chordin | Entrez:8646  Ensembl: ENSG00000090539  HGNC: 1949  HPRD: 04592  |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040  Ensembl: ENSG00000070018  HGNC: 6698  HPRD: 04617  |
| AMOT | angiomotin | Entrez:154796  HGNC: 17810  Ensembl: ENSG00000126016  HPRD: 02327  |
| OTX2 | orthodenticle homeobox 2 | Entrez:5015  HGNC: 8522  HPRD: 07190  Ensembl: ENSG00000165588  |
| FOXA2 | forkhead box A2 | Entrez:3170  HGNC: 5022  Ensembl: ENSG00000125798  HPRD: 02618  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| CHRD | chordin | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| AMOT | angiomotin | ||||
| OTX2 | orthodenticle homeobox 2 | ||||
| FOXA2 | forkhead box A2 |
| Query gene | Gene | Gene description | Edge score |
| CHRD | CHRD | chordin | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| AMOT | AMOT | angiomotin | |
| OTX2 | OTX2 | orthodenticle homeobox 2 | |
| FOXA2 | FOXA2 | forkhead box A2 |