| Gene | Input weight | Standard | Rank | |
| PCSK6 | - | - | 731 | |
| LRP6 | - | - | 778 | |
| PGAP1 | - | - | 865 | |
| OTX2 | - | -1 | 1295 | |
| FOXA2 | - | - | 1835 | |
| LHX1 | - | - | 1926 | |
| NODAL | - | -1 | 2184 | |
| T | - | - | 2584 | |
| SRF | - | - | 2700 | |
| WNT5A | - | - | 2870 | |
| SMAD4 | - | - | 2927 | |
| EPB41L5 | - | - | 3311 | |
| HOXB6 | - | - | 3623 | |
| TBX3 | - | - | 3843 | |
| SKI | - | - | 4231 | |
| WNT3 | - | - | 4799 | |
| GPC3 | - | -1 | 5153 | |
| BMP4 | - | -1 | 5180 | |
| CER1 | - | - | 5192 | |
| CTNNB1 | 0.25 | 1 | 6229 | |
| TDRD5 | - | - | 6427 | |
| HOXD8 | - | - | 6575 | |
| TDGF1 | - | - | 6833 | |
| RIPPLY2 | - | - | 7060 | |
| WNT8A | - | - | 7061 | |
| RIPPLY1 | - | - | 8488 | |
| RNF2 | - | - | 8552 | |
| GDF3 | - | -1 | 9473 | |
| FRS2 | - | - | 12610 | |
| TCF7L1 | - | - | 13850 | |
| LDB1 | - | - | 14274 | |
| WLS | - | - | 16366 | |
| FZD5 | - | - | 21891 | |
| PLD6 | - | - | 22708 |
GO:0009948
| Name | Description | External IDs |
| PCSK6 | proprotein convertase subtilisin/kexin type 6 | Entrez:5046  HPRD: 01329  HGNC: 8569  Ensembl: ENSG00000140479  |
| LRP6 | low density lipoprotein receptor-related protein 6 | Entrez:4040  Ensembl: ENSG00000070018  HGNC: 6698  HPRD: 04617  |
| PGAP1 | post-GPI attachment to proteins 1 | Entrez:80055  HGNC: 25712  HPRD: 10147  |
| OTX2 | orthodenticle homeobox 2 | Entrez:5015  HGNC: 8522  HPRD: 07190  Ensembl: ENSG00000165588  |
| FOXA2 | forkhead box A2 | Entrez:3170  HGNC: 5022  Ensembl: ENSG00000125798  HPRD: 02618  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| PCSK6 | proprotein convertase subtilisin/kexin type 6 | ||||
| LRP6 | low density lipoprotein receptor-related protein 6 | ||||
| PGAP1 | post-GPI attachment to proteins 1 | ||||
| OTX2 | orthodenticle homeobox 2 | ||||
| FOXA2 | forkhead box A2 |
| Query gene | Gene | Gene description | Edge score |
| PCSK6 | PCSK6 | proprotein convertase subtilisin/kexin type 6 | |
| LRP6 | LRP6 | low density lipoprotein receptor-related protein 6 | |
| PGAP1 | PGAP1 | post-GPI attachment to proteins 1 | |
| OTX2 | OTX2 | orthodenticle homeobox 2 | |
| FOXA2 | FOXA2 | forkhead box A2 |