| Gene | Input weight | Standard | Rank | |
| NRXN1 | 1.0 | 1 | 2 | |
| SNAP25 | 0.25 | 1 | 6 | |
| ANK2 | - | - | 9 | |
| SEMA6D | - | - | 20 | |
| NRXN3 | - | - | 23 | |
| GAP43 | - | - | 29 | |
| SLIT1 | - | - | 33 | |
| CACNB2 | - | -1 | 34 | |
| YWHAB | 0.25 | 1 | 45 | |
| DCX | 0.25 | 1 | 47 | |
| NRCAM | 0.25 | 1 | 49 | |
| NFASC | - | - | 97 | |
| MAP2 | - | - | 98 | |
| NPTX1 | - | - | 101 | |
| AP2S1 | - | - | 110 | |
| KCNQ2 | - | -1 | 116 | |
| CRMP1 | - | - | 126 | |
| CELSR3 | - | - | 138 | |
| KRAS | - | -1 | 143 | |
| KIF5C | - | - | 146 | |
| CACNA1G | 0.25 | 1 | 149 | |
| EPHB1 | - | - | 152 | |
| NCAN | - | - | 158 | |
| SCN3B | - | -1 | 160 | |
| EPHA4 | - | - | 162 | |
| FGFR2 | - | -1 | 165 | |
| SEMA4F | - | - | 179 | |
| TBR1 | 0.5 | 1 | 193 | |
| CNTN1 | - | - | 199 | |
| MEG3 | - | - | 201 | |
| CACNB4 | - | - | 207 | |
| PAFAH1B1 | 0.25 | 1 | 208 | |
| CACNA1D | - | - | 210 | |
| DSCAM | - | - | 220 | |
| CACNA1A | - | -1 | 231 | |
| PLXNA2 | - | - | 235 | |
| SLITRK3 | - | - | 240 | |
| TRIO | - | - | 246 | |
| NTNG1 | 0.25 | 1 | 251 | |
| NCAM1 | - | - | 255 | |
| EFNB3 | - | - | 261 | |
| NFIB | - | - | 271 | |
| MAPK8IP2 | - | - | 275 | |
| SEMA6A | - | - | 281 | |
| TUBB3 | - | - | 291 | |
| POU4F1 | - | - | 292 | |
| EPHB2 | - | - | 298 | |
| MAP1B | - | - | 300 | |
| SH3GL2 | - | - | 301 | |
| UNC5C | - | - | 307 | |
| UCHL1 | - | -1 | 317 | |
| AP2M1 | - | - | 321 | |
| CACNB3 | - | - | 338 | |
| L1CAM | - | - | 345 | |
| PAX6 | 0.25 | 1 | 355 | |
| LHX2 | - | - | 362 | |
| SLITRK5 | - | - | 370 | |
| DLG3 | - | - | 388 | |
| TOP2B | - | - | 389 | |
| MYH10 | - | - | 403 | |
| CDK5R1 | - | - | 406 | |
| GAS7 | - | - | 414 | |
| DMD | - | -1 | 421 | |
| ULK2 | - | - | 423 | |
| SNAP91 | - | - | 428 | |
| NREP | - | - | 435 | |
| RELN | 0.5 | 1 | 436 | |
| CNTN2 | - | - | 438 | |
| ARHGEF12 | - | -1 | 444 | |
| PAX2 | - | - | 459 | |
| ADCY1 | 0.25 | 1 | 466 | |
| CDH4 | - | - | 468 | |
| MAP2K1 | 0.25 | 1 | 474 | |
| HPRT1 | - | -1 | 481 | |
| FOXG1 | - | - | 483 | |
| CLASP2 | - | - | 487 | |
| RAB3A | 0.25 | 1 | 520 | |
| OMG | 0.25 | 1 | 521 | |
| CELSR2 | - | - | 526 | |
| APC | 0.25 | 1 | 528 | |
| SCN8A | - | - | 529 | |
| POU4F2 | - | - | 535 | |
| SIAH1 | - | - | 550 | |
| CACNA1C | - | -1 | 558 | |
| SLIT2 | - | - | 582 | |
| NR4A3 | - | -1 | 594 | |
| CACNB1 | - | - | 624 | |
| IGF1R | - | - | 631 | |
| RPS6KA6 | - | - | 637 | |
| LGI1 | - | - | 646 | |
| JUN | - | - | 647 | |
| CTNNA2 | - | - | 654 | |
| STXBP1 | - | - | 659 | |
| RPS6KA5 | - | - | 677 | |
| SLIT3 | - | - | 690 | |
| NR2E1 | 0.25 | 1 | 699 | |
| DLG4 | - | - | 707 | |
| RPS6KA2 | 0.25 | 1 | 711 | |
| FEZF2 | 0.25 | 1 | 712 | |
| NR4A2 | 0.25 | 1 | 713 | |
| KCNQ3 | - | - | 729 | |
| BDNF | 0.25 | 1 | 754 | |
| COL9A1 | - | - | 768 | |
| DICER1 | - | -1 | 834 | |
| CHL1 | - | - | 859 | |
| RPS6KA3 | - | - | 861 | |
| ARHGEF11 | - | - | 870 | |
| CSNK2B | - | - | 894 | |
| DPYSL4 | - | - | 912 | |
| EPHA7 | - | - | 914 | |
| KLF7 | - | - | 915 | |
| ERBB3 | - | - | 921 | |
| USP33 | - | - | 922 | |
| CNTNAP1 | - | - | 951 | |
| TRPC3 | - | - | 971 | |
| RHOA | - | - | 973 | |
| MAPK1 | - | - | 985 | |
| BMP7 | - | - | 987 | |
| CREB1 | - | - | 991 | |
| CAP1 | - | - | 1037 | |
| SLITRK1 | - | - | 1040 | |
| RANBP9 | - | - | 1046 | |
| APBB2 | - | - | 1049 | |
| ANK1 | - | - | 1060 | |
| MAP2K2 | 0.25 | 1 | 1066 | |
| CDC42 | - | - | 1083 | |
| PIP5K1C | - | - | 1085 | |
| RAC1 | - | - | 1087 | |
| ST8SIA2 | 0.25 | 1 | 1119 | |
| BCL11B | - | - | 1127 | |
| PITPNA | - | - | 1145 | |
| KAL1 | - | - | 1172 | |
| DCC | - | - | 1193 | |
| NDEL1 | 0.25 | 1 | 1194 | |
| CAP2 | - | - | 1213 | |
| SPTBN4 | - | - | 1223 | |
| ROBO2 | - | -1 | 1224 | |
| CLTA | - | - | 1257 | |
| TSPO | 0.25 | 1 | 1277 | |
| FYN | - | - | 1284 | |
| OTX2 | - | -1 | 1295 | |
| COL9A2 | - | - | 1311 | |
| SPTBN2 | - | -1 | 1344 | |
| NRP2 | 0.25 | 1 | 1360 | |
| DPYSL5 | - | - | 1374 | |
| DST | - | - | 1378 | |
| HSP90AA1 | - | - | 1400 | |
| EPHA5 | - | - | 1409 | |
| CNTN6 | - | - | 1424 | |
| ISL1 | - | - | 1441 | |
| BRSK2 | - | - | 1458 | |
| CLASP1 | - | - | 1481 | |
| DPYSL3 | - | - | 1486 | |
| ULK1 | - | - | 1530 | |
| SEMA5A | 0.5 | 1 | 1546 | |
| ZIC2 | - | -1 | 1550 | |
| FEZ1 | - | - | 1554 | |
| GSK3B | - | - | 1592 | |
| PTPRZ1 | 0.25 | 1 | 1595 | |
| FGFR3 | - | -1 | 1648 | |
| CCK | 0.25 | 1 | 1662 | |
| ACTG1 | - | -1 | 1676 | |
| ARHGAP35 | - | - | 1706 | |
| BAIAP2 | 0.25 | 1 | 1725 | |
| COL4A3 | - | -1 | 1772 | |
| RTN4 | - | - | 1776 | |
| MAP1S | - | - | 1777 | |
| SRGAP1 | - | - | 1805 | |
| CACNA1I | - | - | 1808 | |
| TRPC7 | - | - | 1822 | |
| AGAP2 | - | - | 1884 | |
| GFAP | - | -1 | 1886 | |
| ROBO1 | - | - | 1888 | |
| EPHB3 | - | - | 1893 | |
| TRPC6 | - | -1 | 1908 | |
| LHX1 | - | - | 1926 | |
| CLTC | - | - | 1949 | |
| ENAH | - | - | 1958 | |
| NRP1 | - | - | 1961 | |
| APP | - | - | 1991 | |
| CFL1 | - | - | 1997 | |
| CNTN4 | 1.0 | 1 | 2038 | |
| DRD2 | 0.25 | 1 | 2071 | |
| SEMA3A | - | - | 2076 | |
| SPTAN1 | - | -1 | 2078 | |
| PLXNC1 | - | - | 2129 | |
| DPYSL2 | - | - | 2131 | |
| ROCK2 | - | - | 2134 | |
| SRC | - | - | 2241 | |
| DSCAML1 | - | - | 2267 | |
| FOXD3 | - | - | 2272 | |
| SPTB | - | - | 2288 | |
| NTF3 | 0.25 | 1 | 2294 | |
| NEUROG2 | - | - | 2345 | |
| DLX5 | - | - | 2361 | |
| COL4A4 | - | -1 | 2368 | |
| BMPR1B | - | -1 | 2397 | |
| BAI1 | - | - | 2404 | |
| COL4A5 | - | -1 | 2436 | |
| HSP90AB1 | - | - | 2440 | |
| APBB1 | - | - | 2444 | |
| NKX2-1 | - | - | 2488 | |
| PVRL1 | - | - | 2493 | |
| MAPK8IP3 | - | - | 2496 | |
| PARD6B | - | - | 2544 | |
| FGFR1 | - | - | 2550 | |
| SOS2 | - | - | 2569 | |
| RHOB | - | - | 2589 | |
| PLXNB1 | - | - | 2639 | |
| ABL1 | - | - | 2653 | |
| GRB2 | - | - | 2662 | |
| FZD7 | - | - | 2714 | |
| MYO10 | - | - | 2728 | |
| RHOG | - | - | 2753 | |
| VAV2 | - | - | 2783 | |
| TNR | - | - | 2784 | |
| DOCK1 | - | - | 2785 | |
| GFRA1 | - | - | 2787 | |
| EGFR | - | -1 | 2811 | |
| NEO1 | - | - | 2831 | |
| NTNG2 | - | - | 2832 | |
| PRNP | - | -1 | 2842 | |
| GPC1 | - | - | 2869 | |
| WNT5A | - | - | 2870 | |
| TRPC5 | - | - | 2881 | |
| TRPC1 | - | - | 2903 | |
| ILK | - | - | 2917 | |
| MYH9 | - | -1 | 2943 | |
| LIFR | - | - | 2964 | |
| VAX2 | - | - | 2965 | |
| PLXNA1 | - | - | 2996 | |
| FZD8 | - | - | 3018 | |
| SPECC1L | - | - | 3048 | |
| CDK5 | 0.25 | 1 | 3113 | |
| NDN | 0.25 | 1 | 3116 | |
| S100B | - | - | 3142 | |
| UNC5A | - | - | 3154 | |
| SOS1 | - | -1 | 3181 | |
| TNN | - | - | 3189 | |
| UNC5D | - | - | 3213 | |
| SRGAP2 | - | - | 3250 | |
| PLXNB3 | - | - | 3278 | |
| ALCAM | - | - | 3326 | |
| AP2A2 | - | - | 3336 | |
| COL2A1 | - | -1 | 3352 | |
| NOTCH1 | - | -1 | 3360 | |
| WASL | - | - | 3464 | |
| LIMK1 | - | - | 3487 | |
| PTPRM | - | - | 3512 | |
| NGFR | 0.25 | 1 | 3554 | |
| FZD3 | - | - | 3579 | |
| GBX2 | - | - | 3588 | |
| MET | 1.0 | 1 | 3618 | |
| LAMA1 | - | - | 3639 | |
| HOXA2 | - | - | 3750 | |
| WNT16 | - | - | 3772 | |
| EVL | - | - | 3830 | |
| EXT1 | 0.25 | 1 | 3907 | |
| CACNA1H | 1.0 | 1 | 3918 | |
| PICALM | - | -1 | 4018 | |
| PTPRA | - | - | 4028 | |
| NTN4 | - | - | 4045 | |
| EGR2 | 0.25 | 1 | 4059 | |
| SPTA1 | - | -1 | 4158 | |
| PLXNA3 | - | - | 4181 | |
| FOXB1 | - | - | 4202 | |
| RND1 | - | - | 4235 | |
| DYNLT1 | - | - | 4275 | |
| ABLIM1 | - | - | 4336 | |
| RTN4RL2 | - | - | 4365 | |
| ITGB1 | - | - | 4390 | |
| ITGB3 | 0.5 | 1 | 4442 | |
| GDNF | - | -1 | 4462 | |
| DRAXIN | - | - | 4545 | |
| SEMA3E | - | - | 4569 | |
| STMN1 | - | - | 4584 | |
| NCK2 | - | - | 4595 | |
| ABLIM3 | - | - | 4647 | |
| RGMA | - | - | 4651 | |
| ATL1 | - | -1 | 4664 | |
| RGMB | - | - | 4681 | |
| ACTB | - | - | 4716 | |
| WNT3 | - | - | 4799 | |
| KIAA1598 | - | - | 4809 | |
| WNT3A | - | - | 4844 | |
| SLITRK6 | - | - | 4922 | |
| SIAH2 | - | - | 4934 | |
| EFNA5 | - | - | 4967 | |
| BRSK1 | - | - | 4979 | |
| ROCK1 | - | - | 5154 | |
| PLXNA4 | - | - | 5187 | |
| FOXD1 | - | - | 5256 | |
| NTN1 | - | - | 5275 | |
| AP2A1 | - | - | 5314 | |
| PARD3 | - | - | 5406 | |
| ATP7A | - | -1 | 5491 | |
| FOXD2 | - | - | 5493 | |
| LMX1A | - | - | 5502 | |
| NRAS | - | -1 | 5506 | |
| PAK2 | - | - | 5515 | |
| PAK1 | - | - | 5556 | |
| RAF1 | 0.25 | 1 | 5559 | |
| AGRN | 0.25 | 1 | 5611 | |
| GLI2 | - | -1 | 5731 | |
| COL6A5 | - | - | 5737 | |
| SMO | 0.25 | 1 | 5864 | |
| AP2B1 | - | - | 5873 | |
| COL6A6 | - | - | 5878 | |
| LHX9 | - | - | 5881 | |
| MNX1 | - | - | 5932 | |
| SPTBN5 | - | - | 5948 | |
| PLCG1 | - | - | 5952 | |
| GAS1 | - | - | 5960 | |
| ST8SIA4 | - | - | 6016 | |
| MEF2A | - | - | 6060 | |
| RUNX3 | - | - | 6065 | |
| MAPK3 | 0.25 | 1 | 6096 | |
| POU4F3 | - | -1 | 6147 | |
| EFNB1 | - | -1 | 6175 | |
| TRPC4 | - | - | 6350 | |
| RTN4R | - | - | 6379 | |
| BOC | - | - | 6380 | |
| PRTFDC1 | - | - | 6437 | |
| NBL1 | - | - | 6749 | |
| RTN4RL1 | - | - | 6953 | |
| VAX1 | - | - | 6999 | |
| SEMA6C | - | - | 7057 | |
| CACNA1F | 0.25 | 1 | 7077 | |
| THBS4 | - | - | 7149 | |
| CXCL12 | - | - | 7204 | |
| WEE1 | - | - | 7251 | |
| FOXD4L1 | - | - | 7290 | |
| GDF7 | - | - | 7494 | |
| PSPN | - | - | 7530 | |
| CCKAR | - | - | 7616 | |
| NOG | - | -1 | 7650 | |
| WNT7B | - | - | 7693 | |
| ITGA2 | - | - | 7830 | |
| HFE2 | - | -1 | 7991 | |
| VASP | - | - | 8124 | |
| NUMBL | - | - | 8142 | |
| GJA1 | 0.25 | 1 | 8195 | |
| FOXN4 | - | - | 8243 | |
| SPTBN1 | - | - | 8272 | |
| LHX4 | - | - | 8278 | |
| COL9A3 | - | - | 8729 | |
| EZR | - | - | 8767 | |
| GLI3 | - | -1 | 9032 | |
| SEMA7A | - | - | 9127 | |
| VCAN | - | - | 9202 | |
| ATOH1 | - | - | 9258 | |
| NKX2-8 | - | - | 9313 | |
| ROBO3 | 0.25 | 1 | 9556 | |
| ADORA2A | 0.25 | 1 | 9605 | |
| SCN1B | - | -1 | 9691 | |
| ITGA9 | - | - | 9814 | |
| FOXD4 | - | - | 9835 | |
| SDC2 | 0.25 | 1 | 9905 | |
| ARHGAP39 | - | - | 9916 | |
| NUMB | - | - | 9921 | |
| RHOC | - | - | 9929 | |
| PTPN11 | - | -1 | 10178 | |
| NCK1 | - | - | 10453 | |
| FOXD4L4 | - | - | 10472 | |
| DLG1 | - | - | 10557 | |
| FARP2 | - | - | 10651 | |
| ADM | - | - | 10761 | |
| COL5A2 | - | -1 | 10790 | |
| FAS | - | -1 | 10857 | |
| TLN1 | - | - | 10867 | |
| ABLIM2 | - | - | 11058 | |
| SDCBP | - | - | 11081 | |
| PTK2 | 0.25 | 1 | 11177 | |
| DTNBP1 | - | - | 11282 | |
| ABL2 | - | - | 11387 | |
| FEZF1 | 0.25 | 1 | 11491 | |
| CTNNA1 | - | - | 11705 | |
| CYFIP1 | - | - | 11868 | |
| TREM2 | - | - | 12118 | |
| ALS2 | - | -1 | 12325 | |
| B3GNT2 | - | - | 12335 | |
| RYK | - | - | 12768 | |
| HRAS | 0.25 | 1 | 12845 | |
| DRGX | - | - | 12859 | |
| SEMA4A | - | -1 | 12995 | |
| TNC | - | - | 13117 | |
| PLXND1 | - | - | 13176 | |
| RPS6KA4 | - | - | 13250 | |
| ITGA5 | - | - | 13311 | |
| NRTN | - | - | 13324 | |
| UNC5B | - | - | 13338 | |
| CD24 | - | -1 | 13608 | |
| STIP1 | - | - | 13670 | |
| CACNA1S | - | -1 | 13685 | |
| ITGA1 | - | - | 13957 | |
| FZD2 | - | - | 13981 | |
| RAC2 | - | - | 14121 | |
| COL3A1 | - | -1 | 14131 | |
| PLA2G10 | - | - | 14358 | |
| S100A6 | - | - | 14515 | |
| PRKCQ | - | - | 14566 | |
| KIF4B | - | - | 14739 | |
| ARTN | - | - | 14977 | |
| RXRA | 0.25 | 1 | 15046 | |
| PTPRC | - | - | 15053 | |
| CSNK2A1 | - | - | 15118 | |
| CD72 | - | - | 15433 | |
| CHST3 | - | - | 15797 | |
| SEMA4D | - | - | 15821 | |
| SHH | - | -1 | 15942 | |
| ITGA2B | - | -1 | 16376 | |
| OPHN1 | 0.5 | 1 | 16404 | |
| FOXD4L5 | - | - | 16935 | |
| CNP | - | - | 17352 | |
| TYROBP | - | - | 17428 | |
| FEZ2 | - | - | 17507 | |
| FOXD4L2 | - | - | 17995 | |
| DVL1P1 | - | - | 19166 | |
| COL1A2 | - | -1 | 19210 | |
| FOXD4L6 | - | - | 19463 | |
| FZD6 | - | - | 19825 | |
| CHRNB2 | 0.25 | 1 | 20277 | |
| EFNA2 | - | - | 20349 | |
| FES | - | - | 20491 | |
| DOCK7 | - | - | 20528 | |
| SEMA3B | - | - | 20616 | |
| COL6A3 | - | -1 | 20754 | |
| AMIGO1 | - | - | 20910 | |
| NTN3 | - | - | 20955 | |
| DVL1 | - | - | 21155 | |
| APOE | 0.25 | 1 | 21310 | |
| ARX | 0.25 | 1 | 21412 | |
| MYL12B | - | - | 21495 | |
| ERBB2 | - | -1 | 21638 | |
| SLC11A2 | - | -1 | 21707 | |
| B3GNT1 | - | - | 21768 | |
| FZD5 | - | - | 21891 | |
| FZD1 | - | - | 22086 | |
| KLK8 | - | - | 22103 | |
| RPS6KA1 | - | - | 22219 | |
| CSNK2A2 | - | - | 22452 | |
| COL6A1 | - | -1 | 22637 | |
| MYH14 | - | -1 | 23122 | |
| TBCE | - | - | 23294 | |
| SPON2 | - | - | 23485 | |
| SEMA3F | - | - | 23763 | |
| ATG7 | - | - | 23783 | |
| CDK1 | - | - | 24001 | |
| LAMC1 | - | - | 24046 | |
| COL5A1 | - | -1 | 24225 | |
| COL6A2 | - | -1 | 24269 | |
| MYL6 | - | - | 24313 | |
| MYH11 | - | -1 | 24412 | |
| KIF4A | - | - | 24464 | |
| RRAS | - | - | 24498 | |
| COL1A1 | - | -1 | 24560 | |
| AFG3L2 | - | -1 | 24574 | |
| LAMB1 | 0.5 | 1 | 24673 | |
| CLU | - | - | 24939 | |
| COL4A1 | - | - | 25191 | |
| ITGAV | - | - | 25348 | |
| MYL9 | - | - | 25700 | |
| LAMB2 | - | - | 25761 | |
| COL4A2 | - | - | 25774 |
GO:0048812
| Name | Description | External IDs |
| NRXN1 | neurexin 1 | Entrez:9378  HPRD: 11858  Ensembl: ENSG00000179915  HGNC: 8008  |
| SNAP25 | synaptosomal-associated protein, 25kDa | Entrez:6616  Ensembl: ENSG00000132639  HPRD: 02637  HGNC: 11132  |
| ANK2 | ankyrin 2, neuronal | Entrez:287  HGNC: 493  HPRD: 00110  Ensembl: ENSG00000145362  |
| SEMA6D | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | Entrez:80031  Ensembl: ENSG00000137872  HGNC: 16770  HPRD: 10221  |
| NRXN3 | neurexin 3 | Entrez:9369  HGNC: 8010  HPRD: 08989  |
| Geneset | Type | Freq. (Network vs Genome) | P-Value (FDR Corrected) | Genes |
| Gene | Description | Avg. edge score to query | Rank | In geneset | In query |
| NRXN1 | neurexin 1 | ||||
| SNAP25 | synaptosomal-associated protein, 25kDa | ||||
| ANK2 | ankyrin 2, neuronal | ||||
| SEMA6D | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | ||||
| NRXN3 | neurexin 3 |
| Query gene | Gene | Gene description | Edge score |
| NRXN1 | NRXN1 | neurexin 1 | |
| SNAP25 | SNAP25 | synaptosomal-associated protein, 25kDa | |
| ANK2 | ANK2 | ankyrin 2, neuronal | |
| SEMA6D | SEMA6D | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | |
| NRXN3 | NRXN3 | neurexin 3 |